RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 THBDP07204 575 aa14.07□□□□□ -0.16
LIME1-209ENST00000494776 AHCYP23526 432 aa14.07□□□□□ -0.16
LIME1-209ENST00000494776 CLDN17P56750 224 aa14.07□□□□□ -0.16
LIME1-209ENST00000494776 IFI44LQ53G44 452 aa14.07□□□□□ -0.16
LIME1-209ENST00000494776 SAMD4BQ5PRF9 694 aaKnown RBP14.07□□□□□ -0.16
LIME1-209ENST00000494776 TSPO2Q5TGU0 170 aa14.07□□□□□ -0.16
LIME1-209ENST00000494776 NIPAL3Q6P499 406 aa14.07□□□□□ -0.16
LIME1-209ENST00000494776 HIST3H2AQ7L7L0 130 aa14.07□□□□□ -0.16
LIME1-209ENST00000494776 ABHD12BQ7Z5M8 362 aaPredicted RBP14.07□□□□□ -0.16
LIME1-209ENST00000494776 TSPYL5Q86VY4 417 aaPredicted RBP14.07□□□□□ -0.16
LIME1-209ENST00000494776 DEFB107AQ8IZN7 70 aa14.07□□□□□ -0.16
LIME1-209ENST00000494776 SCAIQ8N9R8 606 aa14.07□□□□□ -0.16
LIME1-209ENST00000494776 POMGNT2Q8NAT1 580 aa14.07□□□□□ -0.16
LIME1-209ENST00000494776 GEMIN6Q8WXD5 167 aaKnown RBP14.07□□□□□ -0.16
LIME1-209ENST00000494776 HIST1H2ACQ93077 130 aa14.07□□□□□ -0.16
LIME1-209ENST00000494776 MUCL1Q96DR8 90 aa14.07□□□□□ -0.16
LIME1-209ENST00000494776 MOGAT1Q96PD6 335 aa14.07□□□□□ -0.16
LIME1-209ENST00000494776 CDRT15Q96T59 188 aa14.07□□□□□ -0.16
LIME1-209ENST00000494776 SLC19A3Q9BZV2 496 aa14.07□□□□□ -0.16
LIME1-209ENST00000494776 SLCO5A1Q9H2Y9 848 aa14.07□□□□□ -0.16
LIME1-209ENST00000494776 NGBQ9NPG2 151 aa14.07□□□□□ -0.16
LIME1-209ENST00000494776 SLC7A10Q9NS82 523 aa14.07□□□□□ -0.16
LIME1-209ENST00000494776 TAS2R16Q9NYV7 291 aa14.07□□□□□ -0.16
LIME1-209ENST00000494776 DCHS2Q6V1P9 2916 aa14.07□□□□□ -0.16
LIME1-209ENST00000494776 MPDZO75970 2070 aa14.06□□□□□ -0.16
LIME1-209ENST00000494776 ANKHD1Q8IWZ3 2542 aaKnown RBP14.06□□□□□ -0.16
LIME1-209ENST00000494776 FBN2P35556 2912 aa14.06□□□□□ -0.16
LIME1-209ENST00000494776 DEFB108AA8MXU0 73 aa14.06□□□□□ -0.16
LIME1-209ENST00000494776 LRRN3E7EW58 273 aa14.06□□□□□ -0.16
LIME1-209ENST00000494776 AKAP8O43823 692 aaKnown RBP14.06□□□□□ -0.16
LIME1-209ENST00000494776 RAD51DO75771 328 aa14.06□□□□□ -0.16
LIME1-209ENST00000494776 CH25HO95992 272 aa14.06□□□□□ -0.16
LIME1-209ENST00000494776 THRBP10828 461 aa14.06□□□□□ -0.16
LIME1-209ENST00000494776 UMPSP11172 480 aa14.06□□□□□ -0.16
LIME1-209ENST00000494776 COX5AP20674 150 aa14.06□□□□□ -0.16
LIME1-209ENST00000494776 YAP1P46937 504 aaKnown RBP14.06□□□□□ -0.16
LIME1-209ENST00000494776 LTBQ06643 244 aa14.06□□□□□ -0.16
LIME1-209ENST00000494776 ST3GAL3Q11203 375 aa14.06□□□□□ -0.16
LIME1-209ENST00000494776 BEX5Q5H9J7 111 aa14.06□□□□□ -0.16
LIME1-209ENST00000494776 C9orf135Q5VTT2 229 aa14.06□□□□□ -0.16
LIME1-209ENST00000494776 EPHX4Q8IUS5 362 aa14.06□□□□□ -0.16
LIME1-209ENST00000494776 UEVLDQ8IX04 471 aa14.06□□□□□ -0.16
LIME1-209ENST00000494776 ZNF433Q8N7K0 673 aaPredicted RBP14.06□□□□□ -0.16
LIME1-209ENST00000494776 FAM156AQ8NDB6 213 aa14.06□□□□□ -0.16
LIME1-209ENST00000494776 ADPRHL1Q8NDY3 354 aa14.06□□□□□ -0.16
LIME1-209ENST00000494776 OR5J2Q8NH18 312 aa14.06□□□□□ -0.16
LIME1-209ENST00000494776 BCAS4Q8TDM0 211 aa14.06□□□□□ -0.16
LIME1-209ENST00000494776 NRGNQ92686 78 aa14.06□□□□□ -0.16
LIME1-209ENST00000494776 HSH2DQ96JZ2 352 aa14.06□□□□□ -0.16
LIME1-209ENST00000494776 PRRC1Q96M27 445 aa14.06□□□□□ -0.16
LIME1-209ENST00000494776 HS6ST2Q96MM7 605 aa14.06□□□□□ -0.16
LIME1-209ENST00000494776 PRSS27Q9BQR3 290 aa14.06□□□□□ -0.16
LIME1-209ENST00000494776 FNDC11Q9BVV2 318 aa14.06□□□□□ -0.16
LIME1-209ENST00000494776 AMBRA1Q9C0C7 1298 aa14.06□□□□□ -0.16
LIME1-209ENST00000494776 NANSQ9NR45 359 aa14.06□□□□□ -0.16
LIME1-209ENST00000494776 MRPL39Q9NYK5 338 aaKnown RBP14.06□□□□□ -0.16
LIME1-209ENST00000494776 MALT1Q9UDY8 824 aa14.06□□□□□ -0.16
LIME1-209ENST00000494776 ITGB1BP2Q9UKP3 347 aa14.06□□□□□ -0.16
LIME1-209ENST00000494776 OR6C65A6NJZ3 312 aa14.05□□□□□ -0.16
LIME1-209ENST00000494776 B2RBV5 119 aa14.05□□□□□ -0.16
LIME1-209ENST00000494776 MS4A18H0YCH9 400 aa14.05□□□□□ -0.16
LIME1-209ENST00000494776 FZD7O75084 574 aa14.05□□□□□ -0.16
LIME1-209ENST00000494776 SERPINI2O75830 405 aa14.05□□□□□ -0.16
LIME1-209ENST00000494776 ADORA3P0DMS8 318 aa14.05□□□□□ -0.16
LIME1-209ENST00000494776 RBM34P42696 430 aaKnown RBP14.05□□□□□ -0.16
LIME1-209ENST00000494776 SELENOPP49908 381 aa14.05□□□□□ -0.16
LIME1-209ENST00000494776 TGFBR3Q03167 851 aa14.05□□□□□ -0.16
LIME1-209ENST00000494776 PUDPQ08623 228 aa14.05□□□□□ -0.16
LIME1-209ENST00000494776 PPA1Q15181 289 aa14.05□□□□□ -0.16
LIME1-209ENST00000494776 TAB1Q15750 504 aa14.05□□□□□ -0.16
LIME1-209ENST00000494776 ZNF74Q16587 644 aa14.05□□□□□ -0.16
LIME1-209ENST00000494776 MS4A18Q3C1V0 323 aa14.05□□□□□ -0.16
LIME1-209ENST00000494776 OR7E24Q6IFN5 339 aa14.05□□□□□ -0.16
LIME1-209ENST00000494776 CYP4Z1Q86W10 505 aa14.05□□□□□ -0.16
LIME1-209ENST00000494776 NKAIN4Q8IVV8 208 aa14.05□□□□□ -0.16
LIME1-209ENST00000494776 TMEM255BQ8WV15 326 aa14.05□□□□□ -0.16
LIME1-209ENST00000494776 TMEM239Q8WW34 195 aa14.05□□□□□ -0.16
LIME1-209ENST00000494776 FKRPQ9H9S5 495 aa14.05□□□□□ -0.16
LIME1-209ENST00000494776 B3GAT1Q9P2W7 334 aa14.05□□□□□ -0.16
LIME1-209ENST00000494776 MAGEL2Q9UJ55 1249 aa14.05□□□□□ -0.16
LIME1-209ENST00000494776 SAMD4AQ9UPU9 718 aaKnown RBP14.05□□□□□ -0.16
LIME1-209ENST00000494776 MED31Q9Y3C7 131 aa14.05□□□□□ -0.16
LIME1-209ENST00000494776 LRBAP50851 2863 aa14.05□□□□□ -0.16
LIME1-209ENST00000494776 APCP25054 2843 aa14.04□□□□□ -0.16
LIME1-209ENST00000494776 LOC102725191A0A1B0GVB3 256 aa14.04□□□□□ -0.16
LIME1-209ENST00000494776 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.04□□□□□ -0.16
LIME1-209ENST00000494776 ZNF587BE7ETH6 402 aa14.04□□□□□ -0.16
LIME1-209ENST00000494776 C11orf98E9PRG8 122 aa14.04□□□□□ -0.16
LIME1-209ENST00000494776 PLPP3O14495 311 aa14.04□□□□□ -0.16
LIME1-209ENST00000494776 SIAH2O43255 324 aa14.04□□□□□ -0.16
LIME1-209ENST00000494776 SLC43A1O75387 559 aa14.04□□□□□ -0.16
LIME1-209ENST00000494776 MT-ND1P03886 318 aa14.04□□□□□ -0.16
LIME1-209ENST00000494776 HSD17B1P14061 328 aa14.04□□□□□ -0.16
LIME1-209ENST00000494776 CDH2P19022 906 aaPredicted RBP14.04□□□□□ -0.16
LIME1-209ENST00000494776 CALB2P22676 271 aa14.04□□□□□ -0.16
LIME1-209ENST00000494776 MPGP29372 298 aa14.04□□□□□ -0.16
LIME1-209ENST00000494776 HOXC12P31275 282 aa14.04□□□□□ -0.16
LIME1-209ENST00000494776 NR1H2P55055 460 aa14.04□□□□□ -0.16
LIME1-209ENST00000494776 POU3F1Q03052 451 aaPredicted RBP14.04□□□□□ -0.16
LIME1-209ENST00000494776 TIMM23BQ5SRD1 257 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms