RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 PRKAR1BP31321 381 aa8.39□□□□□ -1.07
MSH5-218ENST00000494646 IL1RL1Q01638 556 aa8.39□□□□□ -1.07
MSH5-218ENST00000494646 SF3A3Q12874 501 aaKnown RBP eCLIP8.39□□□□□ -1.07
MSH5-218ENST00000494646 SELPLGQ14242 412 aa8.39□□□□□ -1.07
MSH5-218ENST00000494646 SQLEQ14534 574 aa8.39□□□□□ -1.07
MSH5-218ENST00000494646 RAB35Q15286 201 aa8.39□□□□□ -1.07
MSH5-218ENST00000494646 OR1Q1Q15612 314 aa8.39□□□□□ -1.07
MSH5-218ENST00000494646 ADRM1Q16186 407 aa8.39□□□□□ -1.07
MSH5-218ENST00000494646 RUNDC3AQ59EK9 446 aa8.39□□□□□ -1.07
MSH5-218ENST00000494646 ALG10BQ5I7T1 473 aa8.39□□□□□ -1.07
MSH5-218ENST00000494646 DLEU7Q6UYE1 221 aa8.39□□□□□ -1.07
MSH5-218ENST00000494646 DTX2Q86UW9 622 aa8.39□□□□□ -1.07
MSH5-218ENST00000494646 PRIMA1Q86XR5 153 aa8.39□□□□□ -1.07
MSH5-218ENST00000494646 KRT73Q86Y46 540 aa8.39□□□□□ -1.07
MSH5-218ENST00000494646 MUC15Q8N387 334 aa8.39□□□□□ -1.07
MSH5-218ENST00000494646 SMYD1Q8NB12 490 aa8.39□□□□□ -1.07
MSH5-218ENST00000494646 OR1K1Q8NGR3 316 aa8.39□□□□□ -1.07
MSH5-218ENST00000494646 BCL2L2Q92843 193 aaPredicted RBP8.39□□□□□ -1.07
MSH5-218ENST00000494646 MAGEB18Q96M61 343 aa8.39□□□□□ -1.07
MSH5-218ENST00000494646 ADAD1Q96M93 576 aaKnown RBP8.39□□□□□ -1.07
MSH5-218ENST00000494646 SPATA5L1Q9BVQ7 753 aa8.39□□□□□ -1.07
MSH5-218ENST00000494646 AMBRA1Q9C0C7 1298 aa8.39□□□□□ -1.07
MSH5-218ENST00000494646 TMEM27Q9HBJ8 222 aa8.39□□□□□ -1.07
MSH5-218ENST00000494646 CBLN4Q9NTU7 201 aa8.39□□□□□ -1.07
MSH5-218ENST00000494646 MOKQ9UQ07 419 aa8.39□□□□□ -1.07
MSH5-218ENST00000494646 RASD1Q9Y272 281 aa8.39□□□□□ -1.07
MSH5-218ENST00000494646 NDUFAF1Q9Y375 327 aa8.39□□□□□ -1.07
MSH5-218ENST00000494646 SONP18583 2426 aaKnown RBP8.39□□□□□ -1.07
MSH5-218ENST00000494646 IGKV1D-42A0A075B6H8 117 aa8.38□□□□□ -1.07
MSH5-218ENST00000494646 IGHV1-18A0A0C4DH31 117 aa8.38□□□□□ -1.07
MSH5-218ENST00000494646 HMGB1P1B2RPK0 211 aaPredicted RBP8.38□□□□□ -1.07
MSH5-218ENST00000494646 ZNF587BE7ETH6 402 aa8.38□□□□□ -1.07
MSH5-218ENST00000494646 LRRN3E7EW58 273 aa8.38□□□□□ -1.07
MSH5-218ENST00000494646 ATP6V1G2-DDX39BF2Z307 99 aa8.38□□□□□ -1.07
MSH5-218ENST00000494646 MS4A18H0YCH9 400 aa8.38□□□□□ -1.07
MSH5-218ENST00000494646 M0QX08 132 aa8.38□□□□□ -1.07
MSH5-218ENST00000494646 M0R082 166 aa8.38□□□□□ -1.07
MSH5-218ENST00000494646 OR2T1O43869 369 aa8.38□□□□□ -1.07
MSH5-218ENST00000494646 GPRIN2O60269 458 aa8.38□□□□□ -1.07
MSH5-218ENST00000494646 TPST2O60704 377 aa8.38□□□□□ -1.07
MSH5-218ENST00000494646 SERPINB7O75635 380 aa8.38□□□□□ -1.07
MSH5-218ENST00000494646 F12P00748 615 aaPredicted RBP8.38□□□□□ -1.07
MSH5-218ENST00000494646 GPX2P18283 190 aa8.38□□□□□ -1.07
MSH5-218ENST00000494646 APOBEC3AP31941 199 aaPredicted RBP8.38□□□□□ -1.07
MSH5-218ENST00000494646 ATP4BP51164 291 aa8.38□□□□□ -1.07
MSH5-218ENST00000494646 NUDT6P53370 316 aa8.38□□□□□ -1.07
MSH5-218ENST00000494646 MTPNP58546 118 aa8.38□□□□□ -1.07
MSH5-218ENST00000494646 ARF1P84077 181 aaKnown RBP8.38□□□□□ -1.07
MSH5-218ENST00000494646 DMTNQ08495 405 aa8.38□□□□□ -1.07
MSH5-218ENST00000494646 C1DQ13901 141 aaKnown RBP8.38□□□□□ -1.07
MSH5-218ENST00000494646 ETFDHQ16134 617 aa8.38□□□□□ -1.07
MSH5-218ENST00000494646 MS4A18Q3C1V0 323 aa8.38□□□□□ -1.07
MSH5-218ENST00000494646 TBRG1Q3YBR2 411 aa8.38□□□□□ -1.07
MSH5-218ENST00000494646 C11orf71Q6IPW1 123 aa8.38□□□□□ -1.07
MSH5-218ENST00000494646 HMBOX1Q6NT76 420 aa8.38□□□□□ -1.07
MSH5-218ENST00000494646 ULK3Q6PHR2 472 aa8.38□□□□□ -1.07
MSH5-218ENST00000494646 DHRS4L2Q6PKH6 230 aa8.38□□□□□ -1.07
MSH5-218ENST00000494646 KLHL24Q6TFL4 600 aa8.38□□□□□ -1.07
MSH5-218ENST00000494646 ABHD12BQ7Z5M8 362 aaPredicted RBP8.38□□□□□ -1.07
MSH5-218ENST00000494646 JAZF1Q86VZ6 243 aa8.38□□□□□ -1.07
MSH5-218ENST00000494646 C17orf78Q8N4C9 275 aa8.38□□□□□ -1.07
MSH5-218ENST00000494646 LSMEM1Q8N8F7 131 aa8.38□□□□□ -1.07
MSH5-218ENST00000494646 C1orf162Q8NEQ5 155 aaPredicted RBP8.38□□□□□ -1.07
MSH5-218ENST00000494646 ZNF417Q8TAU3 575 aa8.38□□□□□ -1.07
MSH5-218ENST00000494646 SLC35B4Q969S0 331 aa8.38□□□□□ -1.07
MSH5-218ENST00000494646 FBXO17Q96EF6 278 aa8.38□□□□□ -1.07
MSH5-218ENST00000494646 ZNF837Q96EG3 531 aaPredicted RBP8.38□□□□□ -1.07
MSH5-218ENST00000494646 SLC47A1Q96FL8 570 aa8.38□□□□□ -1.07
MSH5-218ENST00000494646 OXGR1Q96P68 337 aa8.38□□□□□ -1.07
MSH5-218ENST00000494646 ALKBH3Q96Q83 286 aaPredicted RBP8.38□□□□□ -1.07
MSH5-218ENST00000494646 ZNF607Q96SK3 696 aa8.38□□□□□ -1.07
MSH5-218ENST00000494646 ZNF587Q96SQ5 575 aaPredicted RBP8.38□□□□□ -1.07
MSH5-218ENST00000494646 RHNO1Q9BSD3 238 aa8.38□□□□□ -1.07
MSH5-218ENST00000494646 GRIP2Q9C0E4 1043 aa8.38□□□□□ -1.07
MSH5-218ENST00000494646 TMEM38AQ9H6F2 299 aa8.38□□□□□ -1.07
MSH5-218ENST00000494646 FKRPQ9H9S5 495 aa8.38□□□□□ -1.07
MSH5-218ENST00000494646 NPHS2Q9NP85 383 aa8.38□□□□□ -1.07
MSH5-218ENST00000494646 SELENONQ9NZV5 590 aa8.38□□□□□ -1.07
MSH5-218ENST00000494646 LEF1Q9UJU2 399 aaPredicted RBP8.38□□□□□ -1.07
MSH5-218ENST00000494646 SLC13A4Q9UKG4 626 aa8.38□□□□□ -1.07
MSH5-218ENST00000494646 TRAV36DV7A0A075B6V5 113 aa8.37□□□□□ -1.07
MSH5-218ENST00000494646 IGHV4-30-2A0A087WSY4 118 aa8.37□□□□□ -1.07
MSH5-218ENST00000494646 A0A0G2JND7 137 aa8.37□□□□□ -1.07
MSH5-218ENST00000494646 KIAA1324LA8MWY0 1029 aaPredicted RBP8.37□□□□□ -1.07
MSH5-218ENST00000494646 AIM2O14862 343 aa8.37□□□□□ -1.07
MSH5-218ENST00000494646 ANGPT2O15123 496 aa8.37□□□□□ -1.07
MSH5-218ENST00000494646 SLC43A1O75387 559 aa8.37□□□□□ -1.07
MSH5-218ENST00000494646 LY6HO94772 140 aa8.37□□□□□ -1.07
MSH5-218ENST00000494646 ZNF432O94892 652 aa8.37□□□□□ -1.07
MSH5-218ENST00000494646 MFN2O95140 757 aa8.37□□□□□ -1.07
MSH5-218ENST00000494646 OPN1SWP03999 348 aa8.37□□□□□ -1.07
MSH5-218ENST00000494646 HLA-DOBP13765 273 aa8.37□□□□□ -1.07
MSH5-218ENST00000494646 CDH12P55289 794 aa8.37□□□□□ -1.07
MSH5-218ENST00000494646 RGS8P57771 180 aaPredicted RBP8.37□□□□□ -1.07
MSH5-218ENST00000494646 UBE2NP61088 152 aaKnown RBP8.37□□□□□ -1.07
MSH5-218ENST00000494646 NCALDP61601 193 aa8.37□□□□□ -1.07
MSH5-218ENST00000494646 ROR2Q01974 943 aaKnown RBP8.37□□□□□ -1.07
MSH5-218ENST00000494646 KRTAP1-1Q07627 177 aa8.37□□□□□ -1.07
MSH5-218ENST00000494646 DUSP7Q16829 419 aa8.37□□□□□ -1.07
MSH5-218ENST00000494646 PHYHD1Q5SRE7 291 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms