RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 LOC100653049A0A140TA62 436 aa29.14■■■□□ 2.26
CBX4-203ENST00000494546 BBIP1A8MTZ0 92 aa29.14■■■□□ 2.26
CBX4-203ENST00000494546 SHISA9B4DS77 424 aa29.14■■■□□ 2.26
CBX4-203ENST00000494546 FXYD1O00168 92 aa29.14■■■□□ 2.26
CBX4-203ENST00000494546 TMCC2O75069 709 aa29.14■■■□□ 2.26
CBX4-203ENST00000494546 KRT34O76011 436 aa29.14■■■□□ 2.26
CBX4-203ENST00000494546 C8BP07358 591 aa29.14■■■□□ 2.26
CBX4-203ENST00000494546 SOD3P08294 240 aa29.14■■■□□ 2.26
CBX4-203ENST00000494546 CDH11P55287 796 aa29.14■■■□□ 2.26
CBX4-203ENST00000494546 CLDN17P56750 224 aa29.14■■■□□ 2.26
CBX4-203ENST00000494546 C1DQ13901 141 aaKnown RBP29.14■■■□□ 2.26
CBX4-203ENST00000494546 NRF1Q16656 503 aa29.14■■■□□ 2.26
CBX4-203ENST00000494546 OR6T1Q8NGN1 323 aa29.14■■■□□ 2.26
CBX4-203ENST00000494546 OXGR1Q96P68 337 aa29.14■■■□□ 2.26
CBX4-203ENST00000494546 ALKBH3Q96Q83 286 aaPredicted RBP29.14■■■□□ 2.26
CBX4-203ENST00000494546 ECSITQ9BQ95 431 aa29.14■■■□□ 2.26
CBX4-203ENST00000494546 CISD1Q9NZ45 108 aaKnown RBP29.14■■■□□ 2.26
CBX4-203ENST00000494546 B3GALT5Q9Y2C3 310 aa29.14■■■□□ 2.26
CBX4-203ENST00000494546 AMDHD2Q9Y303 409 aa29.14■■■□□ 2.26
CBX4-203ENST00000494546 ZNF587BE7ETH6 402 aa29.13■■■□□ 2.25
CBX4-203ENST00000494546 FZD7O75084 574 aa29.13■■■□□ 2.25
CBX4-203ENST00000494546 DANCRP0C864 163 aa29.13■■■□□ 2.25
CBX4-203ENST00000494546 PTAFRP25105 342 aa29.13■■■□□ 2.25
CBX4-203ENST00000494546 H1FNTQ75WM6 255 aaPredicted RBP29.13■■■□□ 2.25
CBX4-203ENST00000494546 OR8J3Q8NGG0 315 aa29.13■■■□□ 2.25
CBX4-203ENST00000494546 C18orf12Q96KH6 178 aa29.13■■■□□ 2.25
CBX4-203ENST00000494546 ZNF701Q9NV72 531 aaPredicted RBP29.13■■■□□ 2.25
CBX4-203ENST00000494546 B3GAT1Q9P2W7 334 aa29.13■■■□□ 2.25
CBX4-203ENST00000494546 FMO6PO60774 539 aa29.12■■■□□ 2.25
CBX4-203ENST00000494546 CD247P20963 164 aa29.12■■■□□ 2.25
CBX4-203ENST00000494546 CD40P25942 277 aa29.12■■■□□ 2.25
CBX4-203ENST00000494546 ATP5J2P56134 94 aa29.12■■■□□ 2.25
CBX4-203ENST00000494546 SLC25A3Q00325 362 aa29.12■■■□□ 2.25
CBX4-203ENST00000494546 NPTX1Q15818 432 aa29.12■■■□□ 2.25
CBX4-203ENST00000494546 ZNF613Q6PF04 617 aa29.12■■■□□ 2.25
CBX4-203ENST00000494546 KLHL24Q6TFL4 600 aa29.12■■■□□ 2.25
CBX4-203ENST00000494546 C10orf53Q8N6V4 93 aa29.12■■■□□ 2.25
CBX4-203ENST00000494546 MGAT4BQ9UQ53 548 aa29.12■■■□□ 2.25
CBX4-203ENST00000494546 MAGED1Q9Y5V3 778 aaPredicted RBP29.12■■■□□ 2.25
CBX4-203ENST00000494546 CAPN7Q9Y6W3 813 aa29.12■■■□□ 2.25
CBX4-203ENST00000494546 ACANP16112 2415 aa29.12■■■□□ 2.25
CBX4-203ENST00000494546 OR6C65A6NJZ3 312 aa29.11■■■□□ 2.25
CBX4-203ENST00000494546 CPSF4LA6NMK7 179 aaKnown RBP29.11■■■□□ 2.25
CBX4-203ENST00000494546 UPK3AO75631 287 aa29.11■■■□□ 2.25
CBX4-203ENST00000494546 NPPAP01160 153 aa29.11■■■□□ 2.25
CBX4-203ENST00000494546 NQO1P15559 274 aaKnown RBP29.11■■■□□ 2.25
CBX4-203ENST00000494546 PAX1P15863 534 aa29.11■■■□□ 2.25
CBX4-203ENST00000494546 MDH1P40925 334 aaKnown RBP29.11■■■□□ 2.25
CBX4-203ENST00000494546 SPOCK1Q08629 439 aa29.11■■■□□ 2.25
CBX4-203ENST00000494546 HIKESHIQ53FT3 197 aa29.11■■■□□ 2.25
CBX4-203ENST00000494546 SWT1Q5T5J6 900 aaKnown RBP29.11■■■□□ 2.25
CBX4-203ENST00000494546 SLC22A25Q6T423 547 aa29.11■■■□□ 2.25
CBX4-203ENST00000494546 RBM45Q8IUH3 476 aaKnown RBP29.11■■■□□ 2.25
CBX4-203ENST00000494546 OR4D11Q8NGI4 311 aa29.11■■■□□ 2.25
CBX4-203ENST00000494546 RADILQ96JH8 1075 aa29.11■■■□□ 2.25
CBX4-203ENST00000494546 POU2F3Q9UKI9 436 aa29.11■■■□□ 2.25
CBX4-203ENST00000494546 PRPS1P60891 318 aa29.1■■■□□ 2.25
CBX4-203ENST00000494546 MFSD13AQ14CX5 517 aa29.1■■■□□ 2.25
CBX4-203ENST00000494546 PGGHGQ32M88 737 aa29.1■■■□□ 2.25
CBX4-203ENST00000494546 ENTPD8Q5MY95 495 aa29.1■■■□□ 2.25
CBX4-203ENST00000494546 CALHM3Q86XJ0 350 aa29.1■■■□□ 2.25
CBX4-203ENST00000494546 PCYOX1LQ8NBM8 494 aa29.1■■■□□ 2.25
CBX4-203ENST00000494546 OR6S1Q8NH40 331 aa29.1■■■□□ 2.25
CBX4-203ENST00000494546 GTPBP3Q969Y2 492 aaKnown RBP29.1■■■□□ 2.25
CBX4-203ENST00000494546 ASPNQ9BXN1 380 aa29.1■■■□□ 2.25
CBX4-203ENST00000494546 ARMCX1Q9P291 453 aa29.1■■■□□ 2.25
CBX4-203ENST00000494546 RCE1Q9Y256 329 aa29.1■■■□□ 2.25
CBX4-203ENST00000494546 CORINQ9Y5Q5 1042 aa29.1■■■□□ 2.25
CBX4-203ENST00000494546 FLNAP21333 2647 aaKnown RBP29.1■■■□□ 2.25
CBX4-203ENST00000494546 CADP27708 2225 aa29.1■■■□□ 2.25
CBX4-203ENST00000494546 MTORP42345 2549 aa29.1■■■□□ 2.25
CBX4-203ENST00000494546 VPS13CQ709C8 3753 aa29.09■■■□□ 2.25
CBX4-203ENST00000494546 BGLAPP02818 100 aa29.09■■■□□ 2.25
CBX4-203ENST00000494546 INHBBP09529 407 aa29.09■■■□□ 2.25
CBX4-203ENST00000494546 LTBQ06643 244 aa29.09■■■□□ 2.25
CBX4-203ENST00000494546 CCDC80Q76M96 950 aa29.09■■■□□ 2.25
CBX4-203ENST00000494546 LINGO2Q7L985 606 aa29.09■■■□□ 2.25
CBX4-203ENST00000494546 C10orf82Q8WW14 230 aa29.09■■■□□ 2.25
CBX4-203ENST00000494546 MOGAT1Q96PD6 335 aa29.09■■■□□ 2.25
CBX4-203ENST00000494546 TMEM43Q9BTV4 400 aa29.09■■■□□ 2.25
CBX4-203ENST00000494546 LINC00470Q9BZP3 86 aa29.09■■■□□ 2.25
CBX4-203ENST00000494546 GID8Q9NWU2 228 aa29.09■■■□□ 2.25
CBX4-203ENST00000494546 USP22Q9UPT9 525 aa29.09■■■□□ 2.25
CBX4-203ENST00000494546 CHP2O43745 196 aa29.08■■■□□ 2.25
CBX4-203ENST00000494546 WNT11O96014 354 aa29.08■■■□□ 2.25
CBX4-203ENST00000494546 HMBOX1Q6NT76 420 aa29.08■■■□□ 2.25
CBX4-203ENST00000494546 ADPRHL1Q8NDY3 354 aa29.08■■■□□ 2.25
CBX4-203ENST00000494546 OR1K1Q8NGR3 316 aa29.08■■■□□ 2.25
CBX4-203ENST00000494546 RASSF5Q8WWW0 418 aa29.08■■■□□ 2.25
CBX4-203ENST00000494546 SMR3AQ99954 134 aa29.08■■■□□ 2.25
CBX4-203ENST00000494546 ALG2Q9H553 416 aa29.08■■■□□ 2.25
CBX4-203ENST00000494546 FAIMQ9NVQ4 179 aa29.08■■■□□ 2.25
CBX4-203ENST00000494546 TRIM64A6NGJ6 449 aa29.07■■■□□ 2.24
CBX4-203ENST00000494546 TRIM64BA6NI03 449 aa29.07■■■□□ 2.24
CBX4-203ENST00000494546 LRRN3E7EW58 273 aa29.07■■■□□ 2.24
CBX4-203ENST00000494546 MS4A18H0YCH9 400 aa29.07■■■□□ 2.24
CBX4-203ENST00000494546 H7C1Q1 480 aa29.07■■■□□ 2.24
CBX4-203ENST00000494546 OVOL3O00110 214 aa29.07■■■□□ 2.24
CBX4-203ENST00000494546 SLC43A1O75387 559 aa29.07■■■□□ 2.24
CBX4-203ENST00000494546 ZNF432O94892 652 aa29.07■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms