RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 MTX3Q5HYI7 312 aa11.99□□□□□ -0.49
COL1A1-208ENST00000494334 STAC2Q6ZMT1 411 aa11.99□□□□□ -0.49
COL1A1-208ENST00000494334 SLC46A3Q7Z3Q1 461 aa11.99□□□□□ -0.49
COL1A1-208ENST00000494334 CYP4Z1Q86W10 505 aa11.99□□□□□ -0.49
COL1A1-208ENST00000494334 ZNF295-AS1Q8N0V1 137 aa11.99□□□□□ -0.49
COL1A1-208ENST00000494334 GABRG1Q8N1C3 465 aa11.99□□□□□ -0.49
COL1A1-208ENST00000494334 LRRC17Q8N6Y2 441 aa11.99□□□□□ -0.49
COL1A1-208ENST00000494334 OR5J2Q8NH18 312 aa11.99□□□□□ -0.49
COL1A1-208ENST00000494334 APH1AQ96BI3 265 aa11.99□□□□□ -0.49
COL1A1-208ENST00000494334 CCDC124Q96CT7 223 aaKnown RBP11.99□□□□□ -0.49
COL1A1-208ENST00000494334 OXGR1Q96P68 337 aa11.99□□□□□ -0.49
COL1A1-208ENST00000494334 CADM1Q9BY67 442 aaKnown RBP11.99□□□□□ -0.49
COL1A1-208ENST00000494334 KLHL4Q9C0H6 718 aa11.99□□□□□ -0.49
COL1A1-208ENST00000494334 FKRPQ9H9S5 495 aa11.99□□□□□ -0.49
COL1A1-208ENST00000494334 NMNAT1Q9HAN9 279 aaPredicted RBP11.99□□□□□ -0.49
COL1A1-208ENST00000494334 NANSQ9NR45 359 aa11.99□□□□□ -0.49
COL1A1-208ENST00000494334 C20orf141Q9NUB4 165 aa11.99□□□□□ -0.49
COL1A1-208ENST00000494334 PARPBPQ9NWS1 579 aa11.99□□□□□ -0.49
COL1A1-208ENST00000494334 CRIM1Q9NZV1 1036 aa11.99□□□□□ -0.49
COL1A1-208ENST00000494334 MED31Q9Y3C7 131 aa11.99□□□□□ -0.49
COL1A1-208ENST00000494334 FAM32AQ9Y421 112 aaKnown RBP11.99□□□□□ -0.49
COL1A1-208ENST00000494334 MPDZO75970 2070 aa11.99□□□□□ -0.49
COL1A1-208ENST00000494334 A0A087WUU8 490 aa11.98□□□□□ -0.49
COL1A1-208ENST00000494334 C16orf97H3BN30 126 aa11.98□□□□□ -0.49
COL1A1-208ENST00000494334 PLPP3O14495 311 aa11.98□□□□□ -0.49
COL1A1-208ENST00000494334 PIP5K1CO60331 668 aa11.98□□□□□ -0.49
COL1A1-208ENST00000494334 HPRP00739 348 aa11.98□□□□□ -0.49
COL1A1-208ENST00000494334 ADAP00813 363 aa11.98□□□□□ -0.49
COL1A1-208ENST00000494334 IGHV3-9P01782 118 aa11.98□□□□□ -0.49
COL1A1-208ENST00000494334 ASAH2BP0C7U1 165 aa11.98□□□□□ -0.49
COL1A1-208ENST00000494334 HLA-DOBP13765 273 aa11.98□□□□□ -0.49
COL1A1-208ENST00000494334 ITGA2P17301 1181 aa11.98□□□□□ -0.49
COL1A1-208ENST00000494334 FUT1P19526 365 aa11.98□□□□□ -0.49
COL1A1-208ENST00000494334 CCKARP32238 428 aa11.98□□□□□ -0.49
COL1A1-208ENST00000494334 UGT2B10P36537 528 aa11.98□□□□□ -0.49
COL1A1-208ENST00000494334 CBX1P83916 185 aa11.98□□□□□ -0.49
COL1A1-208ENST00000494334 TRAP1Q12931 704 aaKnown RBP11.98□□□□□ -0.49
COL1A1-208ENST00000494334 FBXW9Q5XUX1 488 aa11.98□□□□□ -0.49
COL1A1-208ENST00000494334 TBPL2Q6SJ96 375 aa11.98□□□□□ -0.49
COL1A1-208ENST00000494334 CASP12Q6UXS9 341 aa11.98□□□□□ -0.49
COL1A1-208ENST00000494334 Q6ZT83 130 aa11.98□□□□□ -0.49
COL1A1-208ENST00000494334 AAED1Q7RTV5 226 aa11.98□□□□□ -0.49
COL1A1-208ENST00000494334 CXorf67Q86X51 503 aaPredicted RBP11.98□□□□□ -0.49
COL1A1-208ENST00000494334 MCUR1Q96AQ8 359 aa11.98□□□□□ -0.49
COL1A1-208ENST00000494334 SGTBQ96EQ0 304 aa11.98□□□□□ -0.49
COL1A1-208ENST00000494334 SEPHS2Q99611 448 aa11.98□□□□□ -0.49
COL1A1-208ENST00000494334 SLC24A3Q9HC58 644 aa11.98□□□□□ -0.49
COL1A1-208ENST00000494334 IL1RAPQ9NPH3 570 aa11.98□□□□□ -0.49
COL1A1-208ENST00000494334 FANCFQ9NPI8 374 aa11.98□□□□□ -0.49
COL1A1-208ENST00000494334 KCNN3Q9UGI6 736 aa11.98□□□□□ -0.49
COL1A1-208ENST00000494334 ZNF229Q9UJW7 825 aa11.98□□□□□ -0.49
COL1A1-208ENST00000494334 FLNBO75369 2602 aaKnown RBP11.97□□□□□ -0.49
COL1A1-208ENST00000494334 A0A1W2PRQ8 180 aa11.97□□□□□ -0.49
COL1A1-208ENST00000494334 OR7A10O76100 309 aa11.97□□□□□ -0.49
COL1A1-208ENST00000494334 CNOT4O95628 575 aaKnown RBP11.97□□□□□ -0.49
COL1A1-208ENST00000494334 FABP3P05413 133 aa11.97□□□□□ -0.49
COL1A1-208ENST00000494334 H1F0P07305 194 aaKnown RBP11.97□□□□□ -0.49
COL1A1-208ENST00000494334 ADORA3P0DMS8 318 aa11.97□□□□□ -0.49
COL1A1-208ENST00000494334 UMPSP11172 480 aa11.97□□□□□ -0.49
COL1A1-208ENST00000494334 PRF1P14222 555 aa11.97□□□□□ -0.49
COL1A1-208ENST00000494334 PSMB1P20618 241 aaKnown RBP11.97□□□□□ -0.49
COL1A1-208ENST00000494334 AHCYP23526 432 aa11.97□□□□□ -0.49
COL1A1-208ENST00000494334 RASSF2P50749 326 aa11.97□□□□□ -0.49
COL1A1-208ENST00000494334 IL1RL1Q01638 556 aa11.97□□□□□ -0.49
COL1A1-208ENST00000494334 PUDPQ08623 228 aa11.97□□□□□ -0.49
COL1A1-208ENST00000494334 C1DQ13901 141 aaKnown RBP11.97□□□□□ -0.49
COL1A1-208ENST00000494334 DGCR6Q14129 220 aa11.97□□□□□ -0.49
COL1A1-208ENST00000494334 SFRP5Q5T4F7 317 aa11.97□□□□□ -0.49
COL1A1-208ENST00000494334 TSPO2Q5TGU0 170 aa11.97□□□□□ -0.49
COL1A1-208ENST00000494334 ANKRD34AQ69YU3 496 aa11.97□□□□□ -0.49
COL1A1-208ENST00000494334 NHLRC1Q6VVB1 395 aa11.97□□□□□ -0.49
COL1A1-208ENST00000494334 C22orf34Q6ZV56 151 aa11.97□□□□□ -0.49
COL1A1-208ENST00000494334 NRMQ8IXM6 262 aa11.97□□□□□ -0.49
COL1A1-208ENST00000494334 RNF113BQ8IZP6 322 aaKnown RBP11.97□□□□□ -0.49
COL1A1-208ENST00000494334 SLC7A13Q8TCU3 470 aa11.97□□□□□ -0.49
COL1A1-208ENST00000494334 LIPHQ8WWY8 451 aa11.97□□□□□ -0.49
COL1A1-208ENST00000494334 ACOT11Q8WXI4 607 aaPredicted RBP11.97□□□□□ -0.49
COL1A1-208ENST00000494334 DHRS1Q96LJ7 313 aa11.97□□□□□ -0.49
COL1A1-208ENST00000494334 WFIKKN1Q96NZ8 548 aa11.97□□□□□ -0.49
COL1A1-208ENST00000494334 PIP5K1AQ99755 562 aa11.97□□□□□ -0.49
COL1A1-208ENST00000494334 ANKRD19PQ9H560 264 aa11.97□□□□□ -0.49
COL1A1-208ENST00000494334 TAS2R5Q9NYW4 299 aa11.97□□□□□ -0.49
COL1A1-208ENST00000494334 NDRG3Q9UGV2 375 aa11.97□□□□□ -0.49
COL1A1-208ENST00000494334 GPR52Q9Y2T5 361 aa11.97□□□□□ -0.49
COL1A1-208ENST00000494334 PKDREJQ9NTG1 2253 aa11.97□□□□□ -0.49
COL1A1-208ENST00000494334 ADGRG4Q8IZF6 3080 aa11.96□□□□□ -0.49
COL1A1-208ENST00000494334 ASH1LQ9NR48 2969 aaKnown RBP11.96□□□□□ -0.49
COL1A1-208ENST00000494334 TRAF3IP2O43734 574 aaPredicted RBP11.96□□□□□ -0.49
COL1A1-208ENST00000494334 ZNF432O94892 652 aa11.96□□□□□ -0.49
COL1A1-208ENST00000494334 STAMBPO95630 424 aa11.96□□□□□ -0.49
COL1A1-208ENST00000494334 HIST1H2ABP04908 130 aa11.96□□□□□ -0.49
COL1A1-208ENST00000494334 EPXP11678 715 aa11.96□□□□□ -0.49
COL1A1-208ENST00000494334 IFI30P13284 250 aa11.96□□□□□ -0.49
COL1A1-208ENST00000494334 IGHV1-2P23083 117 aa11.96□□□□□ -0.49
COL1A1-208ENST00000494334 SELENOPP49908 381 aa11.96□□□□□ -0.49
COL1A1-208ENST00000494334 CLDN17P56750 224 aa11.96□□□□□ -0.49
COL1A1-208ENST00000494334 PRKCDQ05655 676 aa11.96□□□□□ -0.49
COL1A1-208ENST00000494334 ZP4Q12836 540 aa11.96□□□□□ -0.49
COL1A1-208ENST00000494334 ITGADQ13349 1161 aa11.96□□□□□ -0.49
COL1A1-208ENST00000494334 P2RY6Q15077 328 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms