RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 TRNT1Q96Q11 434 aaKnown RBP7.16□□□□□ -1.26
RIF1-211ENST00000494333 CCDC106Q9BWC9 280 aa7.16□□□□□ -1.26
RIF1-211ENST00000494333 HDHD5Q9BXW7 423 aa7.16□□□□□ -1.26
RIF1-211ENST00000494333 ACTR6Q9GZN1 396 aa7.16□□□□□ -1.26
RIF1-211ENST00000494333 C11orf54Q9H0W9 315 aaPredicted RBP7.16□□□□□ -1.26
RIF1-211ENST00000494333 SLC38A1Q9H2H9 487 aa7.16□□□□□ -1.26
RIF1-211ENST00000494333 CTPS2Q9NRF8 586 aa7.16□□□□□ -1.26
RIF1-211ENST00000494333 SDR39U1Q9NRG7 319 aaPredicted RBP7.16□□□□□ -1.26
RIF1-211ENST00000494333 SLC6A13Q9NSD5 602 aa7.16□□□□□ -1.26
RIF1-211ENST00000494333 KLHL9Q9P2J3 617 aa7.16□□□□□ -1.26
RIF1-211ENST00000494333 KLHL13Q9P2N7 655 aa7.16□□□□□ -1.26
RIF1-211ENST00000494333 GPR52Q9Y2T5 361 aa7.16□□□□□ -1.26
RIF1-211ENST00000494333 NUP214P35658 2090 aaPredicted RBP7.16□□□□□ -1.26
RIF1-211ENST00000494333 F8P00451 2351 aa7.16□□□□□ -1.26
RIF1-211ENST00000494333 ANKHD1Q8IWZ3 2542 aaKnown RBP7.16□□□□□ -1.26
RIF1-211ENST00000494333 AKAP6Q13023 2319 aa7.15□□□□□ -1.26
RIF1-211ENST00000494333 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.15□□□□□ -1.26
RIF1-211ENST00000494333 AGAP5A6NIR3 686 aa7.15□□□□□ -1.26
RIF1-211ENST00000494333 SMAD9O15198 467 aaKnown RBP7.15□□□□□ -1.26
RIF1-211ENST00000494333 GCM2O75603 506 aaPredicted RBP7.15□□□□□ -1.26
RIF1-211ENST00000494333 SCGB1D2O95969 90 aa7.15□□□□□ -1.26
RIF1-211ENST00000494333 ADAP00813 363 aa7.15□□□□□ -1.26
RIF1-211ENST00000494333 CHRM4P08173 479 aa7.15□□□□□ -1.26
RIF1-211ENST00000494333 PSMB1P20618 241 aaKnown RBP7.15□□□□□ -1.26
RIF1-211ENST00000494333 APOBEC3AP31941 199 aaPredicted RBP7.15□□□□□ -1.26
RIF1-211ENST00000494333 CRATP43155 626 aa7.15□□□□□ -1.26
RIF1-211ENST00000494333 DIO1P49895 249 aa7.15□□□□□ -1.26
RIF1-211ENST00000494333 POLR2JP52435 117 aaKnown RBP7.15□□□□□ -1.26
RIF1-211ENST00000494333 CHN2P52757 468 aa7.15□□□□□ -1.26
RIF1-211ENST00000494333 CSNK2A1P68400 391 aaPredicted RBP7.15□□□□□ -1.26
RIF1-211ENST00000494333 NKX6-1P78426 367 aaPredicted RBP7.15□□□□□ -1.26
RIF1-211ENST00000494333 TXNL4AP83876 142 aaKnown RBP7.15□□□□□ -1.26
RIF1-211ENST00000494333 FOXD4Q12950 439 aaPredicted RBP7.15□□□□□ -1.26
RIF1-211ENST00000494333 TSC22D1Q15714 1073 aa7.15□□□□□ -1.26
RIF1-211ENST00000494333 ACKR1Q16570 336 aa7.15□□□□□ -1.26
RIF1-211ENST00000494333 SYT14P1Q58G82 188 aa7.15□□□□□ -1.26
RIF1-211ENST00000494333 BEX5Q5H9J7 111 aa7.15□□□□□ -1.26
RIF1-211ENST00000494333 RABL3Q5HYI8 236 aa7.15□□□□□ -1.26
RIF1-211ENST00000494333 AGBL2Q5U5Z8 902 aa7.15□□□□□ -1.26
RIF1-211ENST00000494333 EPGNQ6UW88 154 aa7.15□□□□□ -1.26
RIF1-211ENST00000494333 TFAP2EQ6VUC0 442 aa7.15□□□□□ -1.26
RIF1-211ENST00000494333 GRINAQ7Z429 371 aa7.15□□□□□ -1.26
RIF1-211ENST00000494333 ADGRG3Q86Y34 549 aa7.15□□□□□ -1.26
RIF1-211ENST00000494333 GABRG1Q8N1C3 465 aa7.15□□□□□ -1.26
RIF1-211ENST00000494333 WFDC11Q8NEX6 87 aa7.15□□□□□ -1.26
RIF1-211ENST00000494333 STEAP2Q8NFT2 490 aa7.15□□□□□ -1.26
RIF1-211ENST00000494333 OR9I1Q8NGQ6 314 aa7.15□□□□□ -1.26
RIF1-211ENST00000494333 SLC25A43Q8WUT9 341 aaPredicted RBP7.15□□□□□ -1.26
RIF1-211ENST00000494333 CNOT9Q92600 299 aaKnown RBP7.15□□□□□ -1.26
RIF1-211ENST00000494333 PIGTQ969N2 578 aa7.15□□□□□ -1.26
RIF1-211ENST00000494333 VPS33AQ96AX1 596 aa7.15□□□□□ -1.26
RIF1-211ENST00000494333 ARL5BQ96KC2 179 aa7.15□□□□□ -1.26
RIF1-211ENST00000494333 ATP6V1G3Q96LB4 118 aa7.15□□□□□ -1.26
RIF1-211ENST00000494333 PSD2Q9BQI7 771 aa7.15□□□□□ -1.26
RIF1-211ENST00000494333 RMND5AQ9H871 391 aa7.15□□□□□ -1.26
RIF1-211ENST00000494333 UBTD1Q9HAC8 227 aa7.15□□□□□ -1.26
RIF1-211ENST00000494333 TPT1P8Q9HAU6 139 aa7.15□□□□□ -1.26
RIF1-211ENST00000494333 EXOSC3Q9NQT5 275 aaKnown RBP7.15□□□□□ -1.26
RIF1-211ENST00000494333 BEX4Q9NWD9 120 aaPredicted RBP7.15□□□□□ -1.26
RIF1-211ENST00000494333 FAM30AQ9NZY2 134 aa7.15□□□□□ -1.26
RIF1-211ENST00000494333 CHRNA9Q9UGM1 479 aa7.15□□□□□ -1.26
RIF1-211ENST00000494333 ING1Q9UK53 422 aaPredicted RBP7.15□□□□□ -1.26
RIF1-211ENST00000494333 SPIN1Q9Y657 262 aaPredicted RBP7.15□□□□□ -1.26
RIF1-211ENST00000494333 USH1CQ9Y6N9 552 aa7.15□□□□□ -1.26
RIF1-211ENST00000494333 ZNF814B7Z6K7 855 aa7.14□□□□□ -1.27
RIF1-211ENST00000494333 AP3D1O14617 1153 aa7.14□□□□□ -1.27
RIF1-211ENST00000494333 CYTIPO60759 359 aa7.14□□□□□ -1.27
RIF1-211ENST00000494333 FAM20BO75063 409 aa7.14□□□□□ -1.27
RIF1-211ENST00000494333 TACC2O95359 2948 aa7.14□□□□□ -1.27
RIF1-211ENST00000494333 PLAUP00749 431 aa7.14□□□□□ -1.27
RIF1-211ENST00000494333 BCHEP06276 602 aa7.14□□□□□ -1.27
RIF1-211ENST00000494333 DBIP07108 87 aaKnown RBP7.14□□□□□ -1.27
RIF1-211ENST00000494333 FESP07332 822 aa7.14□□□□□ -1.27
RIF1-211ENST00000494333 TFPTP0C1Z6 253 aa7.14□□□□□ -1.27
RIF1-211ENST00000494333 ZCCHC18P0CG32 403 aa7.14□□□□□ -1.27
RIF1-211ENST00000494333 ETFAP13804 333 aa7.14□□□□□ -1.27
RIF1-211ENST00000494333 IL32P24001 234 aa7.14□□□□□ -1.27
RIF1-211ENST00000494333 FKBP2P26885 142 aaKnown RBP7.14□□□□□ -1.27
RIF1-211ENST00000494333 LOXP28300 417 aaPredicted RBP7.14□□□□□ -1.27
RIF1-211ENST00000494333 TACR3P29371 465 aa7.14□□□□□ -1.27
RIF1-211ENST00000494333 HTR3AP46098 478 aa7.14□□□□□ -1.27
RIF1-211ENST00000494333 MVDP53602 400 aa7.14□□□□□ -1.27
RIF1-211ENST00000494333 RIPPLY3P57055 190 aa7.14□□□□□ -1.27
RIF1-211ENST00000494333 ABCA4P78363 2273 aa7.14□□□□□ -1.27
RIF1-211ENST00000494333 DGCR2P98153 550 aa7.14□□□□□ -1.27
RIF1-211ENST00000494333 ITGADQ13349 1161 aa7.14□□□□□ -1.27
RIF1-211ENST00000494333 GNA13Q14344 377 aa7.14□□□□□ -1.27
RIF1-211ENST00000494333 P2RY6Q15077 328 aa7.14□□□□□ -1.27
RIF1-211ENST00000494333 MAPK11Q15759 364 aa7.14□□□□□ -1.27
RIF1-211ENST00000494333 GTDC1Q4AE62 458 aa7.14□□□□□ -1.27
RIF1-211ENST00000494333 C6orf10Q5SRN2 563 aa7.14□□□□□ -1.27
RIF1-211ENST00000494333 MRPL2Q5T653 305 aaKnown RBP7.14□□□□□ -1.27
RIF1-211ENST00000494333 GALNT5Q7Z7M9 940 aa7.14□□□□□ -1.27
RIF1-211ENST00000494333 PEX5LQ8IYB4 626 aa7.14□□□□□ -1.27
RIF1-211ENST00000494333 OR52P1PQ8NH57 321 aa7.14□□□□□ -1.27
RIF1-211ENST00000494333 LRRC8CQ8TDW0 803 aa7.14□□□□□ -1.27
RIF1-211ENST00000494333 SLC38A5Q8WUX1 472 aa7.14□□□□□ -1.27
RIF1-211ENST00000494333 WDR60Q8WVS4 1066 aa7.14□□□□□ -1.27
RIF1-211ENST00000494333 PMM1Q92871 262 aa7.14□□□□□ -1.27
RIF1-211ENST00000494333 S100PBPQ96BU1 408 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms