RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 ULBP3Q9BZM4 244 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 NUAK2Q9H093 628 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 FAIMQ9NVQ4 179 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 WDR70Q9NW82 654 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 CRNNQ9UBG3 495 aaPredicted RBP9.65□□□□□ -0.86
CLCN6-208ENST00000494028 GPN3Q9UHW5 284 aaPredicted RBP9.65□□□□□ -0.86
CLCN6-208ENST00000494028 NOX1Q9Y5S8 564 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 B3GALT1Q9Y5Z6 326 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 IGHV1-45A0A0A0MS14 117 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 A0A1W2PQ72 361 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 SMIM30A4D0T7 59 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 A8MVM7 634 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 PRR32B1ATL7 298 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 BLOC1S5-TXNDC5H3BN57 136 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 H7C1C5 153 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 ETV2O00321 342 aaPredicted RBP9.64□□□□□ -0.87
CLCN6-208ENST00000494028 FZD7O75084 574 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 SLC25A12O75746 678 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 UPK1BO75841 260 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 AHSA1O95433 338 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 F13BP05160 661 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 CD53P19397 219 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 S100A5P33763 92 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 SDC2P34741 201 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 CAPZA2P47755 286 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 RORCP51449 518 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 LCN6P62502 163 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 ACTA2P62736 377 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 ACTG2P63267 376 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 E2F1Q01094 437 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 ZNF45Q02386 682 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 MXD1Q05195 221 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 GPR50Q13585 617 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 INSL4Q14641 139 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 NTRK2Q16620 822 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 TP53I3Q53FA7 332 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 FAM69AQ5T7M9 428 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 C1orf140Q5VVS0 124 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 GPR139Q6DWJ6 353 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 ARL9Q6T311 187 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 C5orf46Q6UWT4 87 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 TMEM91Q6ZNR0 172 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 VASH1Q7L8A9 365 aaPredicted RBP9.64□□□□□ -0.87
CLCN6-208ENST00000494028 MAMDC2Q7Z304 686 aaPredicted RBP9.64□□□□□ -0.87
CLCN6-208ENST00000494028 ADGRG3Q86Y34 549 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 LAX1Q8IWV1 398 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 SYS1Q8N2H4 156 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 OR10G3Q8NGC4 313 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 OR6S1Q8NH40 331 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 ZNF519Q8TB69 540 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 RPS4Y2Q8TD47 263 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 ATOH1Q92858 354 aaPredicted RBP9.64□□□□□ -0.87
CLCN6-208ENST00000494028 TMCO6Q96DC7 493 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 SPACA9Q96E40 222 aaPredicted RBP9.64□□□□□ -0.87
CLCN6-208ENST00000494028 C1GALT1C1Q96EU7 318 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 DNAJA3Q96EY1 480 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 RASL10BQ96S79 203 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 LRFN3Q9BTN0 628 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 MROQ9BYG7 248 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 OR11A1Q9GZK7 315 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 RNF32Q9H0A6 362 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 ZNF700Q9H0M5 742 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 RERGLQ9H628 205 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 RPRD1BQ9NQG5 326 aaKnown RBP9.64□□□□□ -0.87
CLCN6-208ENST00000494028 BABAM2Q9NXR7 383 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 SLC39A1Q9NY26 324 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 GALNT8Q9NY28 637 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 MYOTQ9UBF9 498 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 PLEKHB1Q9UF11 243 aaPredicted RBP9.64□□□□□ -0.87
CLCN6-208ENST00000494028 PTRH2Q9Y3E5 179 aaKnown RBP9.64□□□□□ -0.87
CLCN6-208ENST00000494028 GRIP1Q9Y3R0 1128 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 LOXL2Q9Y4K0 774 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 WIF1Q9Y5W5 379 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 HS3ST3B1Q9Y662 390 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 V9GYH0 126 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 USP34Q70CQ2 3546 aa9.64□□□□□ -0.87
CLCN6-208ENST00000494028 EML6Q6ZMW3 1958 aa9.63□□□□□ -0.87
CLCN6-208ENST00000494028 SDK2Q58EX2 2172 aa9.63□□□□□ -0.87
CLCN6-208ENST00000494028 CACNA1HO95180 2353 aa9.63□□□□□ -0.87
CLCN6-208ENST00000494028 PMS2P1A4D2B8 440 aa9.63□□□□□ -0.87
CLCN6-208ENST00000494028 C2orf72A6NCS6 295 aa9.63□□□□□ -0.87
CLCN6-208ENST00000494028 FTCDNL1E5RQL4 147 aa9.63□□□□□ -0.87
CLCN6-208ENST00000494028 CTDSP2O14595 271 aa9.63□□□□□ -0.87
CLCN6-208ENST00000494028 KLF7O75840 302 aaPredicted RBP9.63□□□□□ -0.87
CLCN6-208ENST00000494028 OR2J2O76002 312 aa9.63□□□□□ -0.87
CLCN6-208ENST00000494028 HLA-DPB1P04440 258 aa9.63□□□□□ -0.87
CLCN6-208ENST00000494028 KLK3P07288 261 aaPredicted RBP9.63□□□□□ -0.87
CLCN6-208ENST00000494028 OR2T7P0C7T2 308 aa9.63□□□□□ -0.87
CLCN6-208ENST00000494028 IL11P20809 199 aa9.63□□□□□ -0.87
CLCN6-208ENST00000494028 GRPRP30550 384 aa9.63□□□□□ -0.87
CLCN6-208ENST00000494028 HTR3AP46098 478 aa9.63□□□□□ -0.87
CLCN6-208ENST00000494028 OR12D2P58182 307 aa9.63□□□□□ -0.87
CLCN6-208ENST00000494028 HSF2Q03933 536 aa9.63□□□□□ -0.87
CLCN6-208ENST00000494028 C17orf67Q0P5P2 114 aa9.63□□□□□ -0.87
CLCN6-208ENST00000494028 OXA1LQ15070 435 aa9.63□□□□□ -0.87
CLCN6-208ENST00000494028 CDK5R1Q15078 307 aa9.63□□□□□ -0.87
CLCN6-208ENST00000494028 BTBD16Q32M84 506 aa9.63□□□□□ -0.87
CLCN6-208ENST00000494028 PLPPR5Q32ZL2 321 aa9.63□□□□□ -0.87
CLCN6-208ENST00000494028 SLC25A53Q5H9E4 307 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms