RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 CMTM6Q9NX76 183 aa19.91■□□□□ 0.78
SNIP1-203ENST00000493916 RCE1Q9Y256 329 aa19.91■□□□□ 0.78
SNIP1-203ENST00000493916 RNF115Q9Y4L5 304 aa19.91■□□□□ 0.78
SNIP1-203ENST00000493916 TRAPPC13A5PLN9 417 aa19.9■□□□□ 0.78
SNIP1-203ENST00000493916 GMNCA6NCL1 334 aa19.9■□□□□ 0.78
SNIP1-203ENST00000493916 PLAUP00749 431 aa19.9■□□□□ 0.78
SNIP1-203ENST00000493916 THY1P04216 161 aa19.9■□□□□ 0.78
SNIP1-203ENST00000493916 CD3EP07766 207 aa19.9■□□□□ 0.78
SNIP1-203ENST00000493916 ZNF43P17038 809 aa19.9■□□□□ 0.78
SNIP1-203ENST00000493916 SELENOPP49908 381 aa19.9■□□□□ 0.78
SNIP1-203ENST00000493916 TGFBR3Q03167 851 aa19.9■□□□□ 0.78
SNIP1-203ENST00000493916 C1QTNF12Q5T7M4 302 aa19.9■□□□□ 0.78
SNIP1-203ENST00000493916 ADAM5Q6NVV9 412 aa19.9■□□□□ 0.78
SNIP1-203ENST00000493916 ABHD12BQ7Z5M8 362 aaPredicted RBP19.9■□□□□ 0.78
SNIP1-203ENST00000493916 TSPYL5Q86VY4 417 aaPredicted RBP19.9■□□□□ 0.78
SNIP1-203ENST00000493916 PIGTQ969N2 578 aa19.9■□□□□ 0.78
SNIP1-203ENST00000493916 MPP4Q96JB8 637 aa19.9■□□□□ 0.78
SNIP1-203ENST00000493916 SLC25A15Q9Y619 301 aa19.9■□□□□ 0.78
SNIP1-203ENST00000493916 ELOVL7A1L3X0 281 aa19.89■□□□□ 0.77
SNIP1-203ENST00000493916 HS3ST1O14792 307 aa19.89■□□□□ 0.77
SNIP1-203ENST00000493916 KDELR2P33947 212 aa19.89■□□□□ 0.77
SNIP1-203ENST00000493916 LTBQ06643 244 aa19.89■□□□□ 0.77
SNIP1-203ENST00000493916 BSPH1Q075Z2 132 aa19.89■□□□□ 0.77
SNIP1-203ENST00000493916 ITPR3Q14573 2671 aa19.89■□□□□ 0.77
SNIP1-203ENST00000493916 WDR88Q6ZMY6 472 aa19.89■□□□□ 0.77
SNIP1-203ENST00000493916 CPLX4Q7Z7G2 160 aa19.89■□□□□ 0.77
SNIP1-203ENST00000493916 CARM1Q86X55 608 aa19.89■□□□□ 0.77
SNIP1-203ENST00000493916 SLC15A3Q8IY34 581 aa19.89■□□□□ 0.77
SNIP1-203ENST00000493916 KDM8Q8N371 416 aa19.89■□□□□ 0.77
SNIP1-203ENST00000493916 CMTM5Q96DZ9 223 aa19.89■□□□□ 0.77
SNIP1-203ENST00000493916 BOD1Q96IK1 185 aa19.89■□□□□ 0.77
SNIP1-203ENST00000493916 CCL19Q99731 98 aa19.89■□□□□ 0.77
SNIP1-203ENST00000493916 ZNF426Q9BUY5 554 aa19.89■□□□□ 0.77
SNIP1-203ENST00000493916 ASPNQ9BXN1 380 aa19.89■□□□□ 0.77
SNIP1-203ENST00000493916 LINC00470Q9BZP3 86 aa19.89■□□□□ 0.77
SNIP1-203ENST00000493916 POLR2J2Q9GZM3 115 aaKnown RBP19.89■□□□□ 0.77
SNIP1-203ENST00000493916 POLR2J3Q9H1A7 115 aaKnown RBP19.89■□□□□ 0.77
SNIP1-203ENST00000493916 NPAP1Q9NZP6 1156 aa19.89■□□□□ 0.77
SNIP1-203ENST00000493916 SLC7A7Q9UM01 511 aa19.89■□□□□ 0.77
SNIP1-203ENST00000493916 DPRXA6NFQ7 191 aa19.88■□□□□ 0.77
SNIP1-203ENST00000493916 ZNF432O94892 652 aa19.88■□□□□ 0.77
SNIP1-203ENST00000493916 MT-ATP6P00846 226 aa19.88■□□□□ 0.77
SNIP1-203ENST00000493916 CBLP22681 906 aa19.88■□□□□ 0.77
SNIP1-203ENST00000493916 PRDX6P30041 224 aa19.88■□□□□ 0.77
SNIP1-203ENST00000493916 CYBRD1Q53TN4 286 aa19.88■□□□□ 0.77
SNIP1-203ENST00000493916 NIPAL3Q6P499 406 aa19.88■□□□□ 0.77
SNIP1-203ENST00000493916 MOGAT1Q96PD6 335 aa19.88■□□□□ 0.77
SNIP1-203ENST00000493916 SLC19A3Q9BZV2 496 aa19.88■□□□□ 0.77
SNIP1-203ENST00000493916 MRPL39Q9NYK5 338 aaKnown RBP19.88■□□□□ 0.77
SNIP1-203ENST00000493916 SH3GLB1Q9Y371 365 aa19.88■□□□□ 0.77
SNIP1-203ENST00000493916 ZNF587BE7ETH6 402 aa19.87■□□□□ 0.77
SNIP1-203ENST00000493916 TRAF3IP2O43734 574 aaPredicted RBP19.87■□□□□ 0.77
SNIP1-203ENST00000493916 PTNP21246 168 aa19.87■□□□□ 0.77
SNIP1-203ENST00000493916 NUDT2P50583 147 aa19.87■□□□□ 0.77
SNIP1-203ENST00000493916 SLC7A2P52569 658 aa19.87■□□□□ 0.77
SNIP1-203ENST00000493916 GYS2P54840 703 aa19.87■□□□□ 0.77
SNIP1-203ENST00000493916 CLDN17P56750 224 aa19.87■□□□□ 0.77
SNIP1-203ENST00000493916 GNGT1P63211 74 aa19.87■□□□□ 0.77
SNIP1-203ENST00000493916 LIPEQ05469 1076 aa19.87■□□□□ 0.77
SNIP1-203ENST00000493916 C1DQ13901 141 aaKnown RBP19.87■□□□□ 0.77
SNIP1-203ENST00000493916 LRRC23Q53EV4 343 aaPredicted RBP19.87■□□□□ 0.77
SNIP1-203ENST00000493916 C9orf135Q5VTT2 229 aa19.87■□□□□ 0.77
SNIP1-203ENST00000493916 TTC33Q6PID6 262 aaPredicted RBP19.87■□□□□ 0.77
SNIP1-203ENST00000493916 ZNF611Q8N823 705 aa19.87■□□□□ 0.77
SNIP1-203ENST00000493916 OR52N5Q8NH56 324 aa19.87■□□□□ 0.77
SNIP1-203ENST00000493916 IGFBPL1Q8WX77 278 aa19.87■□□□□ 0.77
SNIP1-203ENST00000493916 AKAP1Q92667 903 aaKnown RBP eCLIP19.87■□□□□ 0.77
SNIP1-203ENST00000493916 SLC17A5Q9NRA2 495 aa19.87■□□□□ 0.77
SNIP1-203ENST00000493916 F8P00451 2351 aa19.87■□□□□ 0.77
SNIP1-203ENST00000493916 PRRC2AP48634 2157 aaKnown RBP19.87■□□□□ 0.77
SNIP1-203ENST00000493916 MS4A18H0YCH9 400 aa19.86■□□□□ 0.77
SNIP1-203ENST00000493916 NME4O00746 187 aa19.86■□□□□ 0.77
SNIP1-203ENST00000493916 NDUFAB1O14561 156 aa19.86■□□□□ 0.77
SNIP1-203ENST00000493916 CLOCKO15516 846 aa19.86■□□□□ 0.77
SNIP1-203ENST00000493916 AKAP8O43823 692 aaKnown RBP19.86■□□□□ 0.77
SNIP1-203ENST00000493916 KRT33AO76009 404 aa19.86■□□□□ 0.77
SNIP1-203ENST00000493916 NQO1P15559 274 aaKnown RBP19.86■□□□□ 0.77
SNIP1-203ENST00000493916 TNFRSF1BP20333 461 aa19.86■□□□□ 0.77
SNIP1-203ENST00000493916 LGALS3BPQ08380 585 aa19.86■□□□□ 0.77
SNIP1-203ENST00000493916 MS4A18Q3C1V0 323 aa19.86■□□□□ 0.77
SNIP1-203ENST00000493916 UEVLDQ8IX04 471 aa19.86■□□□□ 0.77
SNIP1-203ENST00000493916 LRRC75A-AS1Q8N1F1 130 aa19.86■□□□□ 0.77
SNIP1-203ENST00000493916 C10orf53Q8N6V4 93 aa19.86■□□□□ 0.77
SNIP1-203ENST00000493916 WDR31Q8NA23 367 aa19.86■□□□□ 0.77
SNIP1-203ENST00000493916 ANKK1Q8NFD2 765 aa19.86■□□□□ 0.77
SNIP1-203ENST00000493916 LILRB1Q8NHL6 650 aaPredicted RBP19.86■□□□□ 0.77
SNIP1-203ENST00000493916 ALKBH3Q96Q83 286 aaPredicted RBP19.86■□□□□ 0.77
SNIP1-203ENST00000493916 AMDHD2Q9Y303 409 aa19.86■□□□□ 0.77
SNIP1-203ENST00000493916 VPS13CQ709C8 3753 aa19.86■□□□□ 0.77
SNIP1-203ENST00000493916 LRRN3E7EW58 273 aa19.85■□□□□ 0.77
SNIP1-203ENST00000493916 TMCC2O75069 709 aa19.85■□□□□ 0.77
SNIP1-203ENST00000493916 SLC43A1O75387 559 aa19.85■□□□□ 0.77
SNIP1-203ENST00000493916 UPK3AO75631 287 aa19.85■□□□□ 0.77
SNIP1-203ENST00000493916 OR5F1O95221 314 aa19.85■□□□□ 0.77
SNIP1-203ENST00000493916 HPRP00739 348 aa19.85■□□□□ 0.77
SNIP1-203ENST00000493916 SELENOWP63302 87 aa19.85■□□□□ 0.77
SNIP1-203ENST00000493916 IL1RL1Q01638 556 aa19.85■□□□□ 0.77
SNIP1-203ENST00000493916 PUDPQ08623 228 aa19.85■□□□□ 0.77
SNIP1-203ENST00000493916 PMS2P3Q13401 168 aa19.85■□□□□ 0.77
SNIP1-203ENST00000493916 ZNF74Q16587 644 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms