RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 SIKE1Q9BRV8 207 aa3.58□□□□□ -1.84
GTF3A-208ENST00000493903 WACQ9BTA9 647 aa3.58□□□□□ -1.84
GTF3A-208ENST00000493903 TM2D1Q9BX74 207 aa3.58□□□□□ -1.84
GTF3A-208ENST00000493903 IL22Q9GZX6 179 aa3.58□□□□□ -1.84
GTF3A-208ENST00000493903 INPP5EQ9NRR6 644 aa3.58□□□□□ -1.84
GTF3A-208ENST00000493903 ANGPTL2Q9UKU9 493 aa3.58□□□□□ -1.84
GTF3A-208ENST00000493903 CLSPNQ9HAW4 1339 aa3.58□□□□□ -1.84
GTF3A-208ENST00000493903 CNTNAP2Q9UHC6 1331 aa3.58□□□□□ -1.84
GTF3A-208ENST00000493903 USP47Q96K76 1375 aa3.58□□□□□ -1.84
GTF3A-208ENST00000493903 DISP2A7MBM2 1401 aa3.58□□□□□ -1.84
GTF3A-208ENST00000493903 SNED1Q8TER0 1413 aa3.58□□□□□ -1.84
GTF3A-208ENST00000493903 CLTCL1P53675 1640 aa3.58□□□□□ -1.84
GTF3A-208ENST00000493903 ABCA3Q99758 1704 aa3.58□□□□□ -1.84
GTF3A-208ENST00000493903 TNS1Q9HBL0 1735 aaKnown RBP3.58□□□□□ -1.84
GTF3A-208ENST00000493903 IGHV3-16A0A0C4DH30 117 aa3.57□□□□□ -1.84
GTF3A-208ENST00000493903 LOC100131303A0A0U1RQF7 123 aa3.57□□□□□ -1.84
GTF3A-208ENST00000493903 GABRR3A8MPY1 467 aa3.57□□□□□ -1.84
GTF3A-208ENST00000493903 HSD17B6O14756 317 aa3.57□□□□□ -1.84
GTF3A-208ENST00000493903 LATO43561 262 aa3.57□□□□□ -1.84
GTF3A-208ENST00000493903 HCN1O60741 890 aa3.57□□□□□ -1.84
GTF3A-208ENST00000493903 CABYRO75952 493 aa3.57□□□□□ -1.84
GTF3A-208ENST00000493903 CSTAP01040 98 aa3.57□□□□□ -1.84
GTF3A-208ENST00000493903 CT62P0C5K7 136 aa3.57□□□□□ -1.84
GTF3A-208ENST00000493903 CCDC172P0C7W6 258 aa3.57□□□□□ -1.84
GTF3A-208ENST00000493903 ZNF853P0CG23 659 aa3.57□□□□□ -1.84
GTF3A-208ENST00000493903 EIF2S2P20042 333 aaKnown RBP3.57□□□□□ -1.84
GTF3A-208ENST00000493903 HMOX2P30519 316 aa3.57□□□□□ -1.84
GTF3A-208ENST00000493903 RDXP35241 583 aaKnown RBP3.57□□□□□ -1.84
GTF3A-208ENST00000493903 DDOSTP39656 456 aa3.57□□□□□ -1.84
GTF3A-208ENST00000493903 RFX3P48380 749 aa3.57□□□□□ -1.84
GTF3A-208ENST00000493903 GSK3BP49841 420 aa3.57□□□□□ -1.84
GTF3A-208ENST00000493903 HADHBP55084 474 aaKnown RBP3.57□□□□□ -1.84
GTF3A-208ENST00000493903 RPS14P62263 151 aaKnown RBP3.57□□□□□ -1.84
GTF3A-208ENST00000493903 MRPS11P82912 194 aaKnown RBP3.57□□□□□ -1.84
GTF3A-208ENST00000493903 LTB4RQ15722 352 aa3.57□□□□□ -1.84
GTF3A-208ENST00000493903 C9orf135Q5VTT2 229 aa3.57□□□□□ -1.84
GTF3A-208ENST00000493903 TWF2Q6IBS0 349 aaKnown RBP3.57□□□□□ -1.84
GTF3A-208ENST00000493903 SLC25A48Q6ZT89 311 aaKnown RBP3.57□□□□□ -1.84
GTF3A-208ENST00000493903 LINC00523Q86TU6 105 aa3.57□□□□□ -1.84
GTF3A-208ENST00000493903 LRRTM1Q86UE6 522 aa3.57□□□□□ -1.84
GTF3A-208ENST00000493903 NRAPQ86VF7 1730 aa3.57□□□□□ -1.84
GTF3A-208ENST00000493903 C4orf32Q8N8J7 132 aa3.57□□□□□ -1.84
GTF3A-208ENST00000493903 ZPLD1Q8TCW7 415 aa3.57□□□□□ -1.84
GTF3A-208ENST00000493903 SETD7Q8WTS6 366 aaKnown RBP3.57□□□□□ -1.84
GTF3A-208ENST00000493903 CIDECQ96AQ7 238 aaPredicted RBP3.57□□□□□ -1.84
GTF3A-208ENST00000493903 SLC45A3Q96JT2 553 aa3.57□□□□□ -1.84
GTF3A-208ENST00000493903 MCHR1Q99705 422 aa3.57□□□□□ -1.84
GTF3A-208ENST00000493903 RBM4BQ9BQ04 359 aaKnown RBP3.57□□□□□ -1.84
GTF3A-208ENST00000493903 RIOK1Q9BRS2 568 aaKnown RBP3.57□□□□□ -1.84
GTF3A-208ENST00000493903 MFFQ9GZY8 342 aa3.57□□□□□ -1.84
GTF3A-208ENST00000493903 UPF3AQ9H1J1 476 aaKnown RBP3.57□□□□□ -1.84
GTF3A-208ENST00000493903 LYRM4Q9HD34 91 aa3.57□□□□□ -1.84
GTF3A-208ENST00000493903 GPATCH2LQ9NWQ4 482 aa3.57□□□□□ -1.84
GTF3A-208ENST00000493903 IMPAD1Q9NX62 359 aa3.57□□□□□ -1.84
GTF3A-208ENST00000493903 CACNG5Q9UF02 275 aa3.57□□□□□ -1.84
GTF3A-208ENST00000493903 SLC2A6Q9UGQ3 507 aa3.57□□□□□ -1.84
GTF3A-208ENST00000493903 RIMS3Q9UJD0 308 aa3.57□□□□□ -1.84
GTF3A-208ENST00000493903 NWD2Q9ULI1 1742 aa3.57□□□□□ -1.84
GTF3A-208ENST00000493903 NAP1L2Q9ULW6 460 aaPredicted RBP3.57□□□□□ -1.84
GTF3A-208ENST00000493903 STK38LQ9Y2H1 464 aa3.57□□□□□ -1.84
GTF3A-208ENST00000493903 RGPD1P0DJD0 1748 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 THSD7AQ9UPZ6 1657 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 HFM1A2PYH4 1435 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 TECPR2O15040 1411 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 ROCK1Q13464 1354 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 IGLV7-46A0A075B6I9 117 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 IGKV2D-30A0A075B6S6 120 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 LOC100653049A0A140TA62 436 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 A0A1B0GUS0 222 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 LINC00854A0A1B0GVQ3 168 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 A0A1B0GWB2 263 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 SMCO2A6NFE2 343 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 G3V3Y1 287 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 IDH3BO43837 385 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 KRT34O76011 436 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 LALBAP00709 142 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 AMBPP02760 352 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 ZNF10P21506 573 aaPredicted RBP3.56□□□□□ -1.84
GTF3A-208ENST00000493903 UGT1A4P22310 534 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 ANXA13P27216 316 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 GTF2E2P29084 291 aaKnown RBP3.56□□□□□ -1.84
GTF3A-208ENST00000493903 HSD17B2P37059 387 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 PTGDSP41222 190 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 UQCRFS1P47985 274 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 KPNA2P52292 529 aaKnown RBP3.56□□□□□ -1.84
GTF3A-208ENST00000493903 LIM2P55344 173 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 PKNOX1P55347 436 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 RIPK4P57078 832 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 LIPEQ05469 1076 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 CHRNB3Q05901 458 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 OR5I1Q13606 314 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 GRB7Q14451 532 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 OXA1LQ15070 435 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 ZFP69Q49AA0 526 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 CARD16Q5EG05 197 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 BEX5Q5H9J7 111 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 C9orf66Q5T8R8 295 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 METTL11BQ5VVY1 283 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 CERS6Q6ZMG9 384 aa3.56□□□□□ -1.84
GTF3A-208ENST00000493903 GDPD3Q7L5L3 318 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms