RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 ELK1P19419 428 aa12.59□□□□□ -0.39
VCP-207ENST00000493886 ARL9Q6T311 187 aa12.59□□□□□ -0.39
VCP-207ENST00000493886 CYB561A3Q8NBI2 242 aa12.59□□□□□ -0.39
VCP-207ENST00000493886 OR10H4Q8NGA5 316 aa12.59□□□□□ -0.39
VCP-207ENST00000493886 SLC2A12Q8TD20 617 aa12.59□□□□□ -0.39
VCP-207ENST00000493886 TEAD3Q99594 435 aa12.59□□□□□ -0.39
VCP-207ENST00000493886 MED18Q9BUE0 208 aa12.59□□□□□ -0.39
VCP-207ENST00000493886 PPIL3Q9H2H8 161 aaKnown RBP12.59□□□□□ -0.39
VCP-207ENST00000493886 LIN7BQ9HAP6 207 aa12.59□□□□□ -0.39
VCP-207ENST00000493886 RBFOX1Q9NWB1 397 aaKnown RBP12.59□□□□□ -0.39
VCP-207ENST00000493886 ICAM5Q9UMF0 924 aa12.59□□□□□ -0.39
VCP-207ENST00000493886 SIT1Q9Y3P8 196 aa12.59□□□□□ -0.39
VCP-207ENST00000493886 RP1P56715 2156 aa12.58□□□□□ -0.39
VCP-207ENST00000493886 NUPL2O15504 423 aaKnown RBP12.58□□□□□ -0.39
VCP-207ENST00000493886 LANCL1O43813 399 aa12.58□□□□□ -0.39
VCP-207ENST00000493886 IGKV3-11P04433 115 aa12.58□□□□□ -0.39
VCP-207ENST00000493886 PRKAR1AP10644 381 aa12.58□□□□□ -0.39
VCP-207ENST00000493886 HPGDP15428 266 aa12.58□□□□□ -0.39
VCP-207ENST00000493886 FBLP22087 321 aaKnown RBP12.58□□□□□ -0.39
VCP-207ENST00000493886 FGF9P31371 208 aaPredicted RBP12.58□□□□□ -0.39
VCP-207ENST00000493886 OR10A3P58181 314 aa12.58□□□□□ -0.39
VCP-207ENST00000493886 CD226Q15762 336 aa12.58□□□□□ -0.39
VCP-207ENST00000493886 FNDC7Q5VTL7 733 aa12.58□□□□□ -0.39
VCP-207ENST00000493886 ARHGAP11AQ6P4F7 1023 aa12.58□□□□□ -0.39
VCP-207ENST00000493886 TMEM91Q6ZNR0 172 aa12.58□□□□□ -0.39
VCP-207ENST00000493886 PRSS42Q7Z5A4 293 aa12.58□□□□□ -0.39
VCP-207ENST00000493886 ZNF527Q8NB42 609 aa12.58□□□□□ -0.39
VCP-207ENST00000493886 FAM71CQ8NEG0 241 aa12.58□□□□□ -0.39
VCP-207ENST00000493886 C3orf49Q96BT1 292 aa12.58□□□□□ -0.39
VCP-207ENST00000493886 ALG8Q9BVK2 526 aa12.58□□□□□ -0.39
VCP-207ENST00000493886 BCL2L14Q9BZR8 327 aa12.58□□□□□ -0.39
VCP-207ENST00000493886 KLHL1Q9NR64 748 aa12.58□□□□□ -0.39
VCP-207ENST00000493886 A0A1W2PPK0 400 aa12.58□□□□□ -0.4
VCP-207ENST00000493886 DDAH2O95865 285 aa12.58□□□□□ -0.4
VCP-207ENST00000493886 CLUP10909 449 aa12.58□□□□□ -0.4
VCP-207ENST00000493886 SLC2A5P22732 501 aa12.58□□□□□ -0.4
VCP-207ENST00000493886 ADH7P40394 386 aa12.58□□□□□ -0.4
VCP-207ENST00000493886 EVX1P49640 407 aa12.58□□□□□ -0.4
VCP-207ENST00000493886 EFNA3P52797 238 aa12.58□□□□□ -0.4
VCP-207ENST00000493886 VWA2Q5GFL6 755 aa12.58□□□□□ -0.4
VCP-207ENST00000493886 RPTNQ6XPR3 784 aa12.58□□□□□ -0.4
VCP-207ENST00000493886 LRRC20Q8TCA0 184 aa12.58□□□□□ -0.4
VCP-207ENST00000493886 ZNF721Q8TF20 911 aa12.58□□□□□ -0.4
VCP-207ENST00000493886 ERMAPQ96PL5 475 aaPredicted RBP12.58□□□□□ -0.4
VCP-207ENST00000493886 SLC39A1Q9NY26 324 aa12.58□□□□□ -0.4
VCP-207ENST00000493886 SERTAD3Q9UJW9 196 aa12.58□□□□□ -0.4
VCP-207ENST00000493886 COLQQ9Y215 455 aaPredicted RBP12.58□□□□□ -0.4
VCP-207ENST00000493886 A0A1W2PPC1 479 aa12.58□□□□□ -0.4
VCP-207ENST00000493886 DAPL1A0PJW8 107 aa12.58□□□□□ -0.4
VCP-207ENST00000493886 FRG2CA6NGY1 282 aa12.58□□□□□ -0.4
VCP-207ENST00000493886 LRRN3E7EW58 273 aa12.58□□□□□ -0.4
VCP-207ENST00000493886 TOR1AO14656 332 aa12.58□□□□□ -0.4
VCP-207ENST00000493886 TSC22D2O75157 780 aa12.58□□□□□ -0.4
VCP-207ENST00000493886 NDUFB2O95178 105 aa12.58□□□□□ -0.4
VCP-207ENST00000493886 IFNGP01579 166 aa12.58□□□□□ -0.4
VCP-207ENST00000493886 GYPBP06028 91 aa12.58□□□□□ -0.4
VCP-207ENST00000493886 FOSL2P15408 326 aa12.58□□□□□ -0.4
VCP-207ENST00000493886 CAPZA2P47755 286 aa12.58□□□□□ -0.4
VCP-207ENST00000493886 ZP2Q05996 745 aa12.58□□□□□ -0.4
VCP-207ENST00000493886 SHBQ15464 509 aa12.58□□□□□ -0.4
VCP-207ENST00000493886 ELAVL1Q15717 326 aaKnown RBP12.58□□□□□ -0.4
VCP-207ENST00000493886 SLITRK4Q8IW52 837 aa12.58□□□□□ -0.4
VCP-207ENST00000493886 LRRC17Q8N6Y2 441 aa12.58□□□□□ -0.4
VCP-207ENST00000493886 OR5M3Q8NGP4 307 aa12.58□□□□□ -0.4
VCP-207ENST00000493886 PHOSPHO1Q8TCT1 267 aa12.58□□□□□ -0.4
VCP-207ENST00000493886 LCORQ96JN0 433 aaPredicted RBP12.58□□□□□ -0.4
VCP-207ENST00000493886 ELF4Q99607 663 aaPredicted RBP12.58□□□□□ -0.4
VCP-207ENST00000493886 DPYSL5Q9BPU6 564 aa12.58□□□□□ -0.4
VCP-207ENST00000493886 LRRN3Q9H3W5 708 aa12.58□□□□□ -0.4
VCP-207ENST00000493886 FBXL4Q9UKA2 621 aa12.58□□□□□ -0.4
VCP-207ENST00000493886 TCRBV16S1A1N1A0A5B0 115 aa12.57□□□□□ -0.4
VCP-207ENST00000493886 E9PI62 339 aa12.57□□□□□ -0.4
VCP-207ENST00000493886 GTPBP1O00178 669 aaKnown RBP12.57□□□□□ -0.4
VCP-207ENST00000493886 SCDO00767 359 aa12.57□□□□□ -0.4
VCP-207ENST00000493886 OIP5O43482 229 aa12.57□□□□□ -0.4
VCP-207ENST00000493886 PPM1BO75688 479 aa12.57□□□□□ -0.4
VCP-207ENST00000493886 UTS2O95399 124 aa12.57□□□□□ -0.4
VCP-207ENST00000493886 SHC1P29353 583 aa12.57□□□□□ -0.4
VCP-207ENST00000493886 AGFG1P52594 562 aaKnown RBP12.57□□□□□ -0.4
VCP-207ENST00000493886 SLC3A1Q07837 685 aa12.57□□□□□ -0.4
VCP-207ENST00000493886 MAJINQ3KP22 176 aa12.57□□□□□ -0.4
VCP-207ENST00000493886 ARHGAP40Q5TG30 622 aa12.57□□□□□ -0.4
VCP-207ENST00000493886 C1orf189Q5VU69 101 aa12.57□□□□□ -0.4
VCP-207ENST00000493886 WDR74Q6RFH5 385 aaPredicted RBP12.57□□□□□ -0.4
VCP-207ENST00000493886 KMT5CQ86Y97 462 aa12.57□□□□□ -0.4
VCP-207ENST00000493886 PRSS58Q8IYP2 241 aa12.57□□□□□ -0.4
VCP-207ENST00000493886 OIT3Q8WWZ8 545 aa12.57□□□□□ -0.4
VCP-207ENST00000493886 ADIPOR1Q96A54 375 aa12.57□□□□□ -0.4
VCP-207ENST00000493886 GAL3ST4Q96RP7 486 aa12.57□□□□□ -0.4
VCP-207ENST00000493886 TIMP4Q99727 224 aa12.57□□□□□ -0.4
VCP-207ENST00000493886 NUDT22Q9BRQ3 303 aa12.57□□□□□ -0.4
VCP-207ENST00000493886 TMEM43Q9BTV4 400 aa12.57□□□□□ -0.4
VCP-207ENST00000493886 CHRNA9Q9UGM1 479 aa12.57□□□□□ -0.4
VCP-207ENST00000493886 LINC00587B1AMM8 73 aa12.57□□□□□ -0.4
VCP-207ENST00000493886 SHOXO15266 292 aa12.57□□□□□ -0.4
VCP-207ENST00000493886 HTR2BP41595 481 aa12.57□□□□□ -0.4
VCP-207ENST00000493886 ARRB1P49407 418 aaPredicted RBP12.57□□□□□ -0.4
VCP-207ENST00000493886 CCR4P51679 360 aa12.57□□□□□ -0.4
VCP-207ENST00000493886 BDH1Q02338 343 aa12.57□□□□□ -0.4
VCP-207ENST00000493886 GALEQ14376 348 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms