RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 MCIDASD6RGH6 385 aa17.33■□□□□ 0.37
USP39-218ENST00000493829 PLPP3O14495 311 aa17.33■□□□□ 0.37
USP39-218ENST00000493829 ATXN7O15265 892 aaPredicted RBP17.33■□□□□ 0.37
USP39-218ENST00000493829 RNF13O43567 381 aa17.33■□□□□ 0.37
USP39-218ENST00000493829 PTP4A3O75365 173 aa17.33■□□□□ 0.37
USP39-218ENST00000493829 TPOP07202 933 aa17.33■□□□□ 0.37
USP39-218ENST00000493829 RAC3P60763 192 aa17.33■□□□□ 0.37
USP39-218ENST00000493829 TOP3AQ13472 1001 aaPredicted RBP17.33■□□□□ 0.37
USP39-218ENST00000493829 ALG10Q5BKT4 473 aa17.33■□□□□ 0.37
USP39-218ENST00000493829 ZNF585AQ6P3V2 769 aa17.33■□□□□ 0.37
USP39-218ENST00000493829 SCAIQ8N9R8 606 aa17.33■□□□□ 0.37
USP39-218ENST00000493829 OR52L1Q8NGH7 329 aa17.33■□□□□ 0.37
USP39-218ENST00000493829 CPT1CQ8TCG5 803 aa17.33■□□□□ 0.37
USP39-218ENST00000493829 GABARAPL3Q9BY60 117 aa17.33■□□□□ 0.37
USP39-218ENST00000493829 PRDM14Q9GZV8 571 aa17.33■□□□□ 0.37
USP39-218ENST00000493829 TIGARQ9NQ88 270 aa17.33■□□□□ 0.37
USP39-218ENST00000493829 TAS2R5Q9NYW4 299 aa17.33■□□□□ 0.37
USP39-218ENST00000493829 HIF3AQ9Y2N7 669 aa17.33■□□□□ 0.37
USP39-218ENST00000493829 CLCA1A8K7I4 914 aa17.32■□□□□ 0.36
USP39-218ENST00000493829 KDM4EB2RXH2 506 aaPredicted RBP17.32■□□□□ 0.36
USP39-218ENST00000493829 NDUFB2O95178 105 aa17.32■□□□□ 0.36
USP39-218ENST00000493829 RCBTB2O95199 551 aa17.32■□□□□ 0.36
USP39-218ENST00000493829 SYNGR4O95473 234 aa17.32■□□□□ 0.36
USP39-218ENST00000493829 PPP1R3DO95685 299 aa17.32■□□□□ 0.36
USP39-218ENST00000493829 ABOP16442 354 aa17.32■□□□□ 0.36
USP39-218ENST00000493829 CRISP1P54107 249 aa17.32■□□□□ 0.36
USP39-218ENST00000493829 PUDPQ08623 228 aa17.32■□□□□ 0.36
USP39-218ENST00000493829 NPRL3Q12980 569 aa17.32■□□□□ 0.36
USP39-218ENST00000493829 C6orf52Q5T4I8 152 aa17.32■□□□□ 0.36
USP39-218ENST00000493829 PAQR6Q6TCH4 344 aa17.32■□□□□ 0.36
USP39-218ENST00000493829 FNDC9Q8TBE3 224 aa17.32■□□□□ 0.36
USP39-218ENST00000493829 CPNE4Q96A23 557 aaPredicted RBP17.32■□□□□ 0.36
USP39-218ENST00000493829 IFT27Q9BW83 186 aa17.32■□□□□ 0.36
USP39-218ENST00000493829 TSSK6Q9BXA6 273 aa17.32■□□□□ 0.36
USP39-218ENST00000493829 IGSF10Q6WRI0 2623 aa17.32■□□□□ 0.36
USP39-218ENST00000493829 OR14I1A6ND48 311 aa17.32■□□□□ 0.36
USP39-218ENST00000493829 AQP7P3A6NL99 342 aa17.32■□□□□ 0.36
USP39-218ENST00000493829 HLA-DOBP13765 273 aa17.32■□□□□ 0.36
USP39-218ENST00000493829 P2RY4P51582 365 aa17.32■□□□□ 0.36
USP39-218ENST00000493829 TAF11Q15544 211 aa17.32■□□□□ 0.36
USP39-218ENST00000493829 RFX4Q33E94 735 aa17.32■□□□□ 0.36
USP39-218ENST00000493829 TMEM225Q6GV28 225 aa17.32■□□□□ 0.36
USP39-218ENST00000493829 CD163Q86VB7 1156 aa17.32■□□□□ 0.36
USP39-218ENST00000493829 PM20D2Q8IYS1 436 aa17.32■□□□□ 0.36
USP39-218ENST00000493829 OR4Q3Q8NH05 313 aa17.32■□□□□ 0.36
USP39-218ENST00000493829 TRIB1Q96RU8 372 aa17.32■□□□□ 0.36
USP39-218ENST00000493829 NAA11Q9BSU3 229 aaPredicted RBP17.32■□□□□ 0.36
USP39-218ENST00000493829 PRRG4Q9BZD6 226 aa17.32■□□□□ 0.36
USP39-218ENST00000493829 B3GALT5Q9Y2C3 310 aa17.32■□□□□ 0.36
USP39-218ENST00000493829 ADAM18Q9Y3Q7 739 aa17.32■□□□□ 0.36
USP39-218ENST00000493829 MS4A18H0YCH9 400 aa17.31■□□□□ 0.36
USP39-218ENST00000493829 M0R129 80 aa17.31■□□□□ 0.36
USP39-218ENST00000493829 BCKDKO14874 412 aa17.31■□□□□ 0.36
USP39-218ENST00000493829 EIF1BO60739 113 aaKnown RBP17.31■□□□□ 0.36
USP39-218ENST00000493829 SLC6A6P31641 620 aa17.31■□□□□ 0.36
USP39-218ENST00000493829 ESRRGP62508 458 aa17.31■□□□□ 0.36
USP39-218ENST00000493829 ERVK-25P63136 954 aa17.31■□□□□ 0.36
USP39-218ENST00000493829 POU3F1Q03052 451 aaPredicted RBP17.31■□□□□ 0.36
USP39-218ENST00000493829 PTGES3Q15185 160 aaKnown RBP17.31■□□□□ 0.36
USP39-218ENST00000493829 MS4A18Q3C1V0 323 aa17.31■□□□□ 0.36
USP39-218ENST00000493829 FCRLAQ7L513 359 aa17.31■□□□□ 0.36
USP39-218ENST00000493829 ABHD3Q8WU67 409 aa17.31■□□□□ 0.36
USP39-218ENST00000493829 ADI1Q9BV57 179 aa17.31■□□□□ 0.36
USP39-218ENST00000493829 KATNB1Q9BVA0 655 aa17.31■□□□□ 0.36
USP39-218ENST00000493829 IL20Q9NYY1 176 aa17.31■□□□□ 0.36
USP39-218ENST00000493829 ENOPH1Q9UHY7 261 aa17.31■□□□□ 0.36
USP39-218ENST00000493829 MCTS1Q9ULC4 181 aaKnown RBP17.31■□□□□ 0.36
USP39-218ENST00000493829 SVILO95425 2214 aa17.3■□□□□ 0.36
USP39-218ENST00000493829 FZD7O75084 574 aa17.3■□□□□ 0.36
USP39-218ENST00000493829 CLIC3O95833 236 aa17.3■□□□□ 0.36
USP39-218ENST00000493829 AGFG1P52594 562 aaKnown RBP17.3■□□□□ 0.36
USP39-218ENST00000493829 CTXN1P60606 82 aa17.3■□□□□ 0.36
USP39-218ENST00000493829 PRPS1P60891 318 aa17.3■□□□□ 0.36
USP39-218ENST00000493829 H3F3AP84243 136 aa17.3■□□□□ 0.36
USP39-218ENST00000493829 MELKQ14680 651 aa17.3■□□□□ 0.36
USP39-218ENST00000493829 GINS1Q14691 196 aa17.3■□□□□ 0.36
USP39-218ENST00000493829 RPL13AP3Q6NVV1 102 aa17.3■□□□□ 0.36
USP39-218ENST00000493829 C3P1Q6ZMU1 363 aa17.3■□□□□ 0.36
USP39-218ENST00000493829 CLDN22Q8N7P3 220 aa17.3■□□□□ 0.36
USP39-218ENST00000493829 ZNF555Q8NEP9 628 aa17.3■□□□□ 0.36
USP39-218ENST00000493829 RDH12Q96NR8 316 aa17.3■□□□□ 0.36
USP39-218ENST00000493829 ZNF184Q99676 751 aaPredicted RBP17.3■□□□□ 0.36
USP39-218ENST00000493829 POLDIP3Q9BY77 421 aaKnown RBP17.3■□□□□ 0.36
USP39-218ENST00000493829 INIPQ9NRY2 104 aa17.3■□□□□ 0.36
USP39-218ENST00000493829 FAM118AQ9NWS6 357 aa17.3■□□□□ 0.36
USP39-218ENST00000493829 B3GAT1Q9P2W7 334 aa17.3■□□□□ 0.36
USP39-218ENST00000493829 SH3BGRL2Q9UJC5 107 aa17.3■□□□□ 0.36
USP39-218ENST00000493829 SPTA1P02549 2419 aa17.3■□□□□ 0.36
USP39-218ENST00000493829 SLC22A20A6NK97 555 aa17.29■□□□□ 0.36
USP39-218ENST00000493829 DNPH1O43598 174 aa17.29■□□□□ 0.36
USP39-218ENST00000493829 AQP8O94778 261 aa17.29■□□□□ 0.36
USP39-218ENST00000493829 EMC4Q5J8M3 183 aa17.29■□□□□ 0.36
USP39-218ENST00000493829 DHRSXQ8N5I4 330 aa17.29■□□□□ 0.36
USP39-218ENST00000493829 LRRC75AQ8NAA5 344 aa17.29■□□□□ 0.36
USP39-218ENST00000493829 ADPRHL1Q8NDY3 354 aa17.29■□□□□ 0.36
USP39-218ENST00000493829 ZNF775Q96BV0 537 aaPredicted RBP17.29■□□□□ 0.36
USP39-218ENST00000493829 BBC3Q96PG8 261 aaPredicted RBP17.29■□□□□ 0.36
USP39-218ENST00000493829 GRIP2Q9C0E4 1043 aa17.29■□□□□ 0.36
USP39-218ENST00000493829 NDEL1Q9GZM8 345 aa17.29■□□□□ 0.36
USP39-218ENST00000493829 PAQR5Q9NXK6 330 aaPredicted RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms