RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 MAKP20794 623 aa6.78□□□□□ -1.32
VEGFA-214ENST00000493786 GSTM3P21266 225 aa6.78□□□□□ -1.32
VEGFA-214ENST00000493786 FPR3P25089 353 aa6.78□□□□□ -1.32
VEGFA-214ENST00000493786 CHRNB4P30926 498 aa6.78□□□□□ -1.32
VEGFA-214ENST00000493786 CEACAM8P31997 349 aaPredicted RBP6.78□□□□□ -1.32
VEGFA-214ENST00000493786 RPL4P36578 427 aaKnown RBP6.78□□□□□ -1.32
VEGFA-214ENST00000493786 LIMS1P48059 325 aa6.78□□□□□ -1.32
VEGFA-214ENST00000493786 PRPS1P60891 318 aa6.78□□□□□ -1.32
VEGFA-214ENST00000493786 PPP1R8Q12972 351 aaKnown RBP6.78□□□□□ -1.32
VEGFA-214ENST00000493786 LAPTM4AQ15012 233 aa6.78□□□□□ -1.32
VEGFA-214ENST00000493786 SEC23BQ15437 767 aa6.78□□□□□ -1.32
VEGFA-214ENST00000493786 RPL13AP3Q6NVV1 102 aa6.78□□□□□ -1.32
VEGFA-214ENST00000493786 SHQ1Q6PI26 577 aaKnown RBP6.78□□□□□ -1.32
VEGFA-214ENST00000493786 TMPRSS11FQ6ZWK6 438 aa6.78□□□□□ -1.32
VEGFA-214ENST00000493786 FAM214BQ7L5A3 538 aa6.78□□□□□ -1.32
VEGFA-214ENST00000493786 SLC46A3Q7Z3Q1 461 aa6.78□□□□□ -1.32
VEGFA-214ENST00000493786 HDDC2Q7Z4H3 204 aa6.78□□□□□ -1.32
VEGFA-214ENST00000493786 GALNT5Q7Z7M9 940 aa6.78□□□□□ -1.32
VEGFA-214ENST00000493786 AMIGO2Q86SJ2 522 aa6.78□□□□□ -1.32
VEGFA-214ENST00000493786 STK32CQ86UX6 486 aa6.78□□□□□ -1.32
VEGFA-214ENST00000493786 ZDHHC13Q8IUH4 622 aa6.78□□□□□ -1.32
VEGFA-214ENST00000493786 TUSC5Q8IXB3 177 aa6.78□□□□□ -1.32
VEGFA-214ENST00000493786 ZNF100Q8IYN0 542 aa6.78□□□□□ -1.32
VEGFA-214ENST00000493786 ATG16L2Q8NAA4 619 aa6.78□□□□□ -1.32
VEGFA-214ENST00000493786 AQP11Q8NBQ7 271 aa6.78□□□□□ -1.32
VEGFA-214ENST00000493786 ICA1LQ8NDH6 482 aa6.78□□□□□ -1.32
VEGFA-214ENST00000493786 ANKK1Q8NFD2 765 aa6.78□□□□□ -1.32
VEGFA-214ENST00000493786 OR9K2Q8NGE7 335 aa6.78□□□□□ -1.32
VEGFA-214ENST00000493786 OR9Q2Q8NGE9 314 aa6.78□□□□□ -1.32
VEGFA-214ENST00000493786 OR52L1Q8NGH7 329 aa6.78□□□□□ -1.32
VEGFA-214ENST00000493786 OR4C15Q8NGM1 316 aa6.78□□□□□ -1.32
VEGFA-214ENST00000493786 OR6K3Q8NGY3 331 aa6.78□□□□□ -1.32
VEGFA-214ENST00000493786 OR51A7Q8NH64 312 aa6.78□□□□□ -1.32
VEGFA-214ENST00000493786 OR5K1Q8NHB7 308 aa6.78□□□□□ -1.32
VEGFA-214ENST00000493786 FANK1Q8TC84 345 aa6.78□□□□□ -1.32
VEGFA-214ENST00000493786 CA5BP1Q8WTZ4 195 aa6.78□□□□□ -1.32
VEGFA-214ENST00000493786 LIPHQ8WWY8 451 aa6.78□□□□□ -1.32
VEGFA-214ENST00000493786 NRBF2Q96F24 287 aa6.78□□□□□ -1.32
VEGFA-214ENST00000493786 LRRC46Q96FV0 321 aa6.78□□□□□ -1.32
VEGFA-214ENST00000493786 CCDC120Q96HB5 630 aa6.78□□□□□ -1.32
VEGFA-214ENST00000493786 OXGR1Q96P68 337 aa6.78□□□□□ -1.32
VEGFA-214ENST00000493786 PSD2Q9BQI7 771 aa6.78□□□□□ -1.32
VEGFA-214ENST00000493786 FUZQ9BT04 418 aa6.78□□□□□ -1.32
VEGFA-214ENST00000493786 SEMA6AQ9H2E6 1030 aa6.78□□□□□ -1.32
VEGFA-214ENST00000493786 PIGMQ9H3S5 423 aa6.78□□□□□ -1.32
VEGFA-214ENST00000493786 FANCFQ9NPI8 374 aa6.78□□□□□ -1.32
VEGFA-214ENST00000493786 PARPBPQ9NWS1 579 aa6.78□□□□□ -1.32
VEGFA-214ENST00000493786 CLEC4AQ9UMR7 237 aa6.78□□□□□ -1.32
VEGFA-214ENST00000493786 PROCRQ9UNN8 238 aa6.78□□□□□ -1.32
VEGFA-214ENST00000493786 MGAT4BQ9UQ53 548 aa6.78□□□□□ -1.32
VEGFA-214ENST00000493786 NOSIPQ9Y314 301 aaKnown RBP6.78□□□□□ -1.32
VEGFA-214ENST00000493786 NOX1Q9Y5S8 564 aa6.78□□□□□ -1.32
VEGFA-214ENST00000493786 SPENQ96T58 3664 aaKnown RBP6.78□□□□□ -1.32
VEGFA-214ENST00000493786 ZGRF1Q86YA3 2104 aa6.77□□□□□ -1.33
VEGFA-214ENST00000493786 IGKV3D-15A0A087WSY6 115 aa6.77□□□□□ -1.33
VEGFA-214ENST00000493786 TRAV27A0A087WT01 109 aa6.77□□□□□ -1.33
VEGFA-214ENST00000493786 A0A0G2JNJ9 132 aa6.77□□□□□ -1.33
VEGFA-214ENST00000493786 KDM4EB2RXH2 506 aaPredicted RBP6.77□□□□□ -1.33
VEGFA-214ENST00000493786 EEF1E1-BLOC1S5C9J1V9 151 aa6.77□□□□□ -1.33
VEGFA-214ENST00000493786 G3V2T6 193 aa6.77□□□□□ -1.33
VEGFA-214ENST00000493786 H3BNX3 289 aa6.77□□□□□ -1.33
VEGFA-214ENST00000493786 EEF1E1O43324 174 aaKnown RBP6.77□□□□□ -1.33
VEGFA-214ENST00000493786 FZD7O75084 574 aa6.77□□□□□ -1.33
VEGFA-214ENST00000493786 MRPL33O75394 65 aaKnown RBP6.77□□□□□ -1.33
VEGFA-214ENST00000493786 SMNDC1O75940 238 aaKnown RBP eCLIP6.77□□□□□ -1.335e-10■■■□□ 14.7
VEGFA-214ENST00000493786 KRT33AO76009 404 aa6.77□□□□□ -1.33
VEGFA-214ENST00000493786 TOXO94900 526 aa6.77□□□□□ -1.33
VEGFA-214ENST00000493786 IL18BPO95998 194 aa6.77□□□□□ -1.33
VEGFA-214ENST00000493786 ADAP00813 363 aa6.77□□□□□ -1.33
VEGFA-214ENST00000493786 POU2F1P14859 743 aa6.77□□□□□ -1.33
VEGFA-214ENST00000493786 BMP5P22003 454 aa6.77□□□□□ -1.33
VEGFA-214ENST00000493786 FUT4P22083 530 aa6.77□□□□□ -1.33
VEGFA-214ENST00000493786 AGTR1P30556 359 aa6.77□□□□□ -1.33
VEGFA-214ENST00000493786 OMPP47874 163 aa6.77□□□□□ -1.33
VEGFA-214ENST00000493786 DAP3P51398 398 aaKnown RBP6.77□□□□□ -1.33
VEGFA-214ENST00000493786 SLC16A1P53985 500 aa6.77□□□□□ -1.33
VEGFA-214ENST00000493786 IST1P53990 364 aa6.77□□□□□ -1.33
VEGFA-214ENST00000493786 ELF3P78545 371 aaPredicted RBP6.77□□□□□ -1.33
VEGFA-214ENST00000493786 LSM11P83369 360 aaKnown RBP eCLIP6.77□□□□□ -1.332e-28■□□□□ 11.2
VEGFA-214ENST00000493786 H3F3AP84243 136 aa6.77□□□□□ -1.33
VEGFA-214ENST00000493786 POU3F1Q03052 451 aaPredicted RBP6.77□□□□□ -1.33
VEGFA-214ENST00000493786 LTBQ06643 244 aa6.77□□□□□ -1.33
VEGFA-214ENST00000493786 RPL18Q07020 188 aaKnown RBP6.77□□□□□ -1.33
VEGFA-214ENST00000493786 ZP4Q12836 540 aa6.77□□□□□ -1.33
VEGFA-214ENST00000493786 TSPAN31Q12999 210 aa6.77□□□□□ -1.33
VEGFA-214ENST00000493786 SLC17A1Q14916 467 aa6.77□□□□□ -1.33
VEGFA-214ENST00000493786 POU4F3Q15319 338 aa6.77□□□□□ -1.33
VEGFA-214ENST00000493786 SLC25A35Q3KQZ1 300 aa6.77□□□□□ -1.33
VEGFA-214ENST00000493786 ZBED5Q49AG3 693 aa6.77□□□□□ -1.33
VEGFA-214ENST00000493786 ALG10Q5BKT4 473 aa6.77□□□□□ -1.33
VEGFA-214ENST00000493786 C1orf94Q6P1W5 598 aa6.77□□□□□ -1.33
VEGFA-214ENST00000493786 PGBD2Q6P3X8 592 aa6.77□□□□□ -1.33
VEGFA-214ENST00000493786 XKRXQ6PP77 449 aa6.77□□□□□ -1.33
VEGFA-214ENST00000493786 SMARCD3Q6STE5 483 aa6.77□□□□□ -1.33
VEGFA-214ENST00000493786 CASP12Q6UXS9 341 aa6.77□□□□□ -1.33
VEGFA-214ENST00000493786 SEM1Q6ZVN7 128 aa6.77□□□□□ -1.33
VEGFA-214ENST00000493786 NCCRP1Q6ZVX7 275 aaPredicted RBP6.77□□□□□ -1.33
VEGFA-214ENST00000493786 AAED1Q7RTV5 226 aa6.77□□□□□ -1.33
VEGFA-214ENST00000493786 PXKQ7Z7A4 578 aa6.77□□□□□ -1.33
VEGFA-214ENST00000493786 ZER1Q7Z7L7 766 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms