RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 CCDC182A6NF36 153 aa2.28□□□□□ -2.04
ITGB1-216ENST00000493758 ZDHHC11BP0C7U3 371 aa2.28□□□□□ -2.04
ITGB1-216ENST00000493758 IGHV3-43DP0DP04 118 aa2.28□□□□□ -2.04
ITGB1-216ENST00000493758 HPGDP15428 266 aa2.28□□□□□ -2.04
ITGB1-216ENST00000493758 HNF1AP20823 631 aa2.28□□□□□ -2.04
ITGB1-216ENST00000493758 LAP3P28838 519 aa2.28□□□□□ -2.04
ITGB1-216ENST00000493758 TMEM183BQ1AE95 376 aa2.28□□□□□ -2.04
ITGB1-216ENST00000493758 TTC23Q5W5X9 447 aa2.28□□□□□ -2.04
ITGB1-216ENST00000493758 BLOC1S2Q6QNY1 142 aa2.28□□□□□ -2.04
ITGB1-216ENST00000493758 Q6ZN92 141 aa2.28□□□□□ -2.04
ITGB1-216ENST00000493758 H2AFVQ71UI9 128 aa2.28□□□□□ -2.04
ITGB1-216ENST00000493758 TMEM183AQ8IXX5 376 aa2.28□□□□□ -2.04
ITGB1-216ENST00000493758 CYB561D1Q8N8Q1 229 aa2.28□□□□□ -2.04
ITGB1-216ENST00000493758 FGF11Q92914 225 aa2.28□□□□□ -2.04
ITGB1-216ENST00000493758 LRRC58Q96CX6 371 aa2.28□□□□□ -2.04
ITGB1-216ENST00000493758 CMTM7Q96FZ5 175 aa2.28□□□□□ -2.04
ITGB1-216ENST00000493758 TGM7Q96PF1 710 aa2.28□□□□□ -2.04
ITGB1-216ENST00000493758 DNTTIP1Q9H147 329 aa2.28□□□□□ -2.04
ITGB1-216ENST00000493758 IFI27L2Q9H2X8 130 aa2.28□□□□□ -2.04
ITGB1-216ENST00000493758 RWDD1Q9H446 243 aaPredicted RBP2.28□□□□□ -2.04
ITGB1-216ENST00000493758 TM9SF3Q9HD45 589 aa2.28□□□□□ -2.04
ITGB1-216ENST00000493758 UFSP2Q9NUQ7 469 aa2.28□□□□□ -2.04
ITGB1-216ENST00000493758 DEC1Q9P2X7 70 aa2.28□□□□□ -2.04
ITGB1-216ENST00000493758 XCL2Q9UBD3 114 aa2.28□□□□□ -2.04
ITGB1-216ENST00000493758 NSG1A0A0A6YYJ2 146 aa2.27□□□□□ -2.05
ITGB1-216ENST00000493758 PLAC8L1A1L4L8 177 aa2.27□□□□□ -2.05
ITGB1-216ENST00000493758 ANGPT2O15123 496 aa2.27□□□□□ -2.05
ITGB1-216ENST00000493758 ANGPTL7O43827 346 aa2.27□□□□□ -2.05
ITGB1-216ENST00000493758 B4GALT2O60909 372 aa2.27□□□□□ -2.05
ITGB1-216ENST00000493758 CD5P06127 495 aa2.27□□□□□ -2.05
ITGB1-216ENST00000493758 MRPL3P09001 348 aaKnown RBP2.27□□□□□ -2.05
ITGB1-216ENST00000493758 CD86P42081 329 aa2.27□□□□□ -2.05
ITGB1-216ENST00000493758 KLRB1Q12918 225 aa2.27□□□□□ -2.05
ITGB1-216ENST00000493758 GNMTQ14749 295 aa2.27□□□□□ -2.05
ITGB1-216ENST00000493758 TPD52L1Q16890 204 aaPredicted RBP2.27□□□□□ -2.05
ITGB1-216ENST00000493758 RSPO1Q2MKA7 263 aaPredicted RBP2.27□□□□□ -2.05
ITGB1-216ENST00000493758 ABCA11PQ4W5N1 156 aa2.27□□□□□ -2.05
ITGB1-216ENST00000493758 LINC00483Q53H64 154 aa2.27□□□□□ -2.05
ITGB1-216ENST00000493758 COA6Q5JTJ3 125 aaKnown RBP2.27□□□□□ -2.05
ITGB1-216ENST00000493758 MARCH8Q5T0T0 291 aa2.27□□□□□ -2.05
ITGB1-216ENST00000493758 HSDL2Q6YN16 418 aa2.27□□□□□ -2.05
ITGB1-216ENST00000493758 C19orf35Q6ZS72 473 aa2.27□□□□□ -2.05
ITGB1-216ENST00000493758 CCDC80Q76M96 950 aa2.27□□□□□ -2.05
ITGB1-216ENST00000493758 CCDC50Q8IVM0 306 aa2.27□□□□□ -2.05
ITGB1-216ENST00000493758 ZDHHC21Q8IVQ6 265 aa2.27□□□□□ -2.05
ITGB1-216ENST00000493758 ANKFN1Q8N957 763 aa2.27□□□□□ -2.05
ITGB1-216ENST00000493758 OR2G3Q8NGZ4 309 aa2.27□□□□□ -2.05
ITGB1-216ENST00000493758 RNF2Q99496 336 aa2.27□□□□□ -2.05
ITGB1-216ENST00000493758 THUMPD2Q9BTF0 503 aaKnown RBP2.27□□□□□ -2.05
ITGB1-216ENST00000493758 CAPS2Q9BXY5 557 aa2.27□□□□□ -2.05
ITGB1-216ENST00000493758 LRRN3Q9H3W5 708 aa2.27□□□□□ -2.05
ITGB1-216ENST00000493758 RPP21Q9H633 154 aaKnown RBP2.27□□□□□ -2.05
ITGB1-216ENST00000493758 NHEJ1Q9H9Q4 299 aaPredicted RBP2.27□□□□□ -2.05
ITGB1-216ENST00000493758 CTPS2Q9NRF8 586 aa2.27□□□□□ -2.05
ITGB1-216ENST00000493758 SEC14L3Q9UDX4 400 aa2.27□□□□□ -2.05
ITGB1-216ENST00000493758 LAMP5Q9UJQ1 280 aa2.27□□□□□ -2.05
ITGB1-216ENST00000493758 YTHDF2Q9Y5A9 579 aaKnown RBP2.27□□□□□ -2.05
ITGB1-216ENST00000493758 EPB41P11171 864 aaKnown RBP2.26□□□□□ -2.05
ITGB1-216ENST00000493758 GCAP28676 217 aa2.26□□□□□ -2.05
ITGB1-216ENST00000493758 CHI3L1P36222 383 aaPredicted RBP2.26□□□□□ -2.05
ITGB1-216ENST00000493758 QARSP47897 775 aaKnown RBP2.26□□□□□ -2.05
ITGB1-216ENST00000493758 CASP4P49662 377 aa2.26□□□□□ -2.05
ITGB1-216ENST00000493758 RGS4P49798 205 aa2.26□□□□□ -2.05
ITGB1-216ENST00000493758 GPM6AP51674 278 aa2.26□□□□□ -2.05
ITGB1-216ENST00000493758 BPIFB3P59826 476 aa2.26□□□□□ -2.05
ITGB1-216ENST00000493758 HMGCS1Q01581 520 aa2.26□□□□□ -2.05
ITGB1-216ENST00000493758 XKR4Q5GH76 650 aa2.26□□□□□ -2.05
ITGB1-216ENST00000493758 LY6G6FQ5SQ64 297 aa2.26□□□□□ -2.05
ITGB1-216ENST00000493758 CES3Q6UWW8 571 aa2.26□□□□□ -2.05
ITGB1-216ENST00000493758 Q6ZR03 302 aa2.26□□□□□ -2.05
ITGB1-216ENST00000493758 C15orf56Q8N910 161 aa2.26□□□□□ -2.05
ITGB1-216ENST00000493758 UFD1Q92890 307 aa2.26□□□□□ -2.05
ITGB1-216ENST00000493758 SENP8Q96LD8 212 aa2.26□□□□□ -2.05
ITGB1-216ENST00000493758 OXGR1Q96P68 337 aa2.26□□□□□ -2.05
ITGB1-216ENST00000493758 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.26□□□□□ -2.05
ITGB1-216ENST00000493758 KCNIP1Q9NZI2 227 aa2.26□□□□□ -2.05
ITGB1-216ENST00000493758 RNF14Q9UBS8 474 aa2.26□□□□□ -2.05
ITGB1-216ENST00000493758 OR12D3Q9UGF7 316 aa2.26□□□□□ -2.05
ITGB1-216ENST00000493758 TIMM10BQ9Y5J6 103 aa2.26□□□□□ -2.05
ITGB1-216ENST00000493758 LRP4O75096 1905 aa2.26□□□□□ -2.05
ITGB1-216ENST00000493758 IQANK1A0A1B0GTG1 560 aa2.25□□□□□ -2.05
ITGB1-216ENST00000493758 RBMY1BA6NDE4 496 aaKnown RBP2.25□□□□□ -2.05
ITGB1-216ENST00000493758 RBMY1EA6NEQ0 496 aaKnown RBP2.25□□□□□ -2.05
ITGB1-216ENST00000493758 BGLAPP02818 100 aa2.25□□□□□ -2.05
ITGB1-216ENST00000493758 RBMY1DP0C7P1 496 aaKnown RBP2.25□□□□□ -2.05
ITGB1-216ENST00000493758 RBMY1A1P0DJD3 496 aaKnown RBP2.25□□□□□ -2.05
ITGB1-216ENST00000493758 SMIM10L1P0DMW3 83 aa2.25□□□□□ -2.05
ITGB1-216ENST00000493758 PAX7P23759 505 aa2.25□□□□□ -2.05
ITGB1-216ENST00000493758 GYG1P46976 350 aa2.25□□□□□ -2.05
ITGB1-216ENST00000493758 UBE2AP49459 152 aa2.25□□□□□ -2.05
ITGB1-216ENST00000493758 CBX1P83916 185 aa2.25□□□□□ -2.05
ITGB1-216ENST00000493758 SMARCB1Q12824 385 aa2.25□□□□□ -2.05
ITGB1-216ENST00000493758 DPYSL2Q16555 572 aa2.25□□□□□ -2.05
ITGB1-216ENST00000493758 Q5W150 140 aa2.25□□□□□ -2.05
ITGB1-216ENST00000493758 TMEM225Q6GV28 225 aa2.25□□□□□ -2.05
ITGB1-216ENST00000493758 ZSCAN25Q6NSZ9 544 aa2.25□□□□□ -2.05
ITGB1-216ENST00000493758 KCNIP4Q6PIL6 250 aa2.25□□□□□ -2.05
ITGB1-216ENST00000493758 RNF182Q8N6D2 247 aa2.25□□□□□ -2.05
ITGB1-216ENST00000493758 ZNF615Q8N8J6 731 aa2.25□□□□□ -2.05
ITGB1-216ENST00000493758 CTNNBL1Q8WYA6 563 aaPredicted RBP2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms