RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 FCRL1Q96LA6 429 aa2.3□□□□□ -2.04
SMC4-223ENST00000493695 RIOK2Q9BVS4 552 aaKnown RBP2.3□□□□□ -2.04
SMC4-223ENST00000493695 FAIM2Q9BWQ8 316 aa2.3□□□□□ -2.04
SMC4-223ENST00000493695 RBKSQ9H477 322 aa2.3□□□□□ -2.04
SMC4-223ENST00000493695 CLCF1Q9UBD9 225 aa2.3□□□□□ -2.04
SMC4-223ENST00000493695 ZNF225Q9UK10 706 aa2.3□□□□□ -2.04
SMC4-223ENST00000493695 PLEKHH1Q9ULM0 1364 aa2.3□□□□□ -2.04
SMC4-223ENST00000493695 A0A0G2JN53 185 aa2.29□□□□□ -2.04
SMC4-223ENST00000493695 TCRBV9S1A1TA0A576 114 aa2.29□□□□□ -2.04
SMC4-223ENST00000493695 NKX2-6A6NCS4 301 aa2.29□□□□□ -2.04
SMC4-223ENST00000493695 SNTNA6NMZ2 147 aa2.29□□□□□ -2.04
SMC4-223ENST00000493695 GJE1A6NN92 205 aa2.29□□□□□ -2.04
SMC4-223ENST00000493695 SERPINE3A8MV23 424 aa2.29□□□□□ -2.04
SMC4-223ENST00000493695 CXCL11O14625 94 aa2.29□□□□□ -2.04
SMC4-223ENST00000493695 RGS16O15492 202 aaPredicted RBP2.29□□□□□ -2.04
SMC4-223ENST00000493695 SNAI2O43623 268 aa2.29□□□□□ -2.04
SMC4-223ENST00000493695 ATP5LO75964 103 aa2.29□□□□□ -2.04
SMC4-223ENST00000493695 DIRAS1O95057 198 aa2.29□□□□□ -2.04
SMC4-223ENST00000493695 TBPP20226 339 aa2.29□□□□□ -2.04
SMC4-223ENST00000493695 ATP6V1B2P21281 511 aa2.29□□□□□ -2.04
SMC4-223ENST00000493695 CMA1P23946 247 aa2.29□□□□□ -2.04
SMC4-223ENST00000493695 PMELP40967 661 aa2.29□□□□□ -2.04
SMC4-223ENST00000493695 LHX2P50458 406 aa2.29□□□□□ -2.04
SMC4-223ENST00000493695 ACTR1AP61163 376 aa2.29□□□□□ -2.04
SMC4-223ENST00000493695 CDK16Q00536 496 aa2.29□□□□□ -2.04
SMC4-223ENST00000493695 ATP6AP1Q15904 470 aa2.29□□□□□ -2.04
SMC4-223ENST00000493695 KLHL38Q2WGJ6 581 aa2.29□□□□□ -2.04
SMC4-223ENST00000493695 LRRC23Q53EV4 343 aaPredicted RBP2.29□□□□□ -2.04
SMC4-223ENST00000493695 PDZK1Q5T2W1 519 aa2.29□□□□□ -2.04
SMC4-223ENST00000493695 C1orf94Q6P1W5 598 aa2.29□□□□□ -2.04
SMC4-223ENST00000493695 TBC1D21Q8IYX1 336 aa2.29□□□□□ -2.04
SMC4-223ENST00000493695 TPRX1Q8N7U7 411 aa2.29□□□□□ -2.04
SMC4-223ENST00000493695 MAIP1Q8WWC4 291 aa2.29□□□□□ -2.04
SMC4-223ENST00000493695 ACOT11Q8WXI4 607 aaPredicted RBP2.29□□□□□ -2.04
SMC4-223ENST00000493695 ARPC1AQ92747 370 aa2.29□□□□□ -2.04
SMC4-223ENST00000493695 RDH5Q92781 318 aa2.29□□□□□ -2.04
SMC4-223ENST00000493695 RBM14Q96PK6 669 aaKnown RBP2.29□□□□□ -2.04
SMC4-223ENST00000493695 OR2M2Q96R28 347 aa2.29□□□□□ -2.04
SMC4-223ENST00000493695 SECISBP2Q96T21 854 aaKnown RBP2.29□□□□□ -2.04
SMC4-223ENST00000493695 NPY6RQ99463 290 aa2.29□□□□□ -2.04
SMC4-223ENST00000493695 NPAS2Q99743 824 aa2.29□□□□□ -2.04
SMC4-223ENST00000493695 RASL11BQ9BPW5 248 aa2.29□□□□□ -2.04
SMC4-223ENST00000493695 VCXQ9H320 206 aa2.29□□□□□ -2.04
SMC4-223ENST00000493695 VCX2Q9H322 139 aa2.29□□□□□ -2.04
SMC4-223ENST00000493695 RANBP3Q9H6Z4 567 aaPredicted RBP2.29□□□□□ -2.04
SMC4-223ENST00000493695 PLGRKTQ9HBL7 147 aa2.29□□□□□ -2.04
SMC4-223ENST00000493695 EML4Q9HC35 981 aaKnown RBP2.29□□□□□ -2.04
SMC4-223ENST00000493695 MCCC2Q9HCC0 563 aa2.29□□□□□ -2.04
SMC4-223ENST00000493695 IL26Q9NPH9 171 aa2.29□□□□□ -2.04
SMC4-223ENST00000493695 CCL28Q9NRJ3 127 aa2.29□□□□□ -2.04
SMC4-223ENST00000493695 THUMPD1Q9NXG2 353 aaKnown RBP2.29□□□□□ -2.04
SMC4-223ENST00000493695 QPCTLQ9NXS2 382 aa2.29□□□□□ -2.04
SMC4-223ENST00000493695 CDH9Q9ULB4 789 aa2.29□□□□□ -2.04
SMC4-223ENST00000493695 TMCC3Q9ULS5 477 aa2.29□□□□□ -2.04
SMC4-223ENST00000493695 CACNG2Q9Y698 323 aa2.29□□□□□ -2.04
SMC4-223ENST00000493695 FANCIQ9NVI1 1328 aa2.28□□□□□ -2.04
SMC4-223ENST00000493695 IGHV3-64DA0A0J9YX35 117 aa2.28□□□□□ -2.04
SMC4-223ENST00000493695 ANKRD63C9JTQ0 380 aa2.28□□□□□ -2.04
SMC4-223ENST00000493695 FCMRO60667 390 aa2.28□□□□□ -2.04
SMC4-223ENST00000493695 MTX2O75431 263 aa2.28□□□□□ -2.04
SMC4-223ENST00000493695 CLDN9O95484 217 aa2.28□□□□□ -2.04
SMC4-223ENST00000493695 MOSP00540 346 aa2.28□□□□□ -2.04
SMC4-223ENST00000493695 IGKV1-17P01599 117 aa2.28□□□□□ -2.04
SMC4-223ENST00000493695 KLK3P07288 261 aaPredicted RBP2.28□□□□□ -2.04
SMC4-223ENST00000493695 OR5I1Q13606 314 aa2.28□□□□□ -2.04
SMC4-223ENST00000493695 PAGE3Q5JUK9 113 aa2.28□□□□□ -2.04
SMC4-223ENST00000493695 SAMD4BQ5PRF9 694 aaKnown RBP2.28□□□□□ -2.04
SMC4-223ENST00000493695 HSDL2Q6YN16 418 aa2.28□□□□□ -2.04
SMC4-223ENST00000493695 SLC26A11Q86WA9 606 aa2.28□□□□□ -2.04
SMC4-223ENST00000493695 MFSD6LQ8IWD5 586 aa2.28□□□□□ -2.04
SMC4-223ENST00000493695 LYPD1Q8N2G4 141 aa2.28□□□□□ -2.04
SMC4-223ENST00000493695 FAM83FQ8NEG4 500 aaPredicted RBP2.28□□□□□ -2.04
SMC4-223ENST00000493695 FAM210BQ96KR6 192 aa2.28□□□□□ -2.04
SMC4-223ENST00000493695 CLCC1Q96S66 551 aa2.28□□□□□ -2.04
SMC4-223ENST00000493695 LY9Q9HBG7 655 aa2.28□□□□□ -2.04
SMC4-223ENST00000493695 ZNF282Q9UDV7 671 aaPredicted RBP2.28□□□□□ -2.04
SMC4-223ENST00000493695 SEC14L3Q9UDX4 400 aa2.28□□□□□ -2.04
SMC4-223ENST00000493695 PSG11Q9UQ72 335 aa2.28□□□□□ -2.04
SMC4-223ENST00000493695 NSG1A0A0A6YYJ2 146 aa2.27□□□□□ -2.05
SMC4-223ENST00000493695 IQANK1A0A1B0GTG1 560 aa2.27□□□□□ -2.05
SMC4-223ENST00000493695 A8MXQ7 604 aa2.27□□□□□ -2.05
SMC4-223ENST00000493695 C12orf77C9JDV5 145 aa2.27□□□□□ -2.05
SMC4-223ENST00000493695 HIP1O00291 1037 aa2.27□□□□□ -2.05
SMC4-223ENST00000493695 SLC31A2O15432 143 aa2.27□□□□□ -2.05
SMC4-223ENST00000493695 POLR2DO15514 142 aaKnown RBP2.27□□□□□ -2.05
SMC4-223ENST00000493695 ZNF324O75467 553 aaPredicted RBP2.27□□□□□ -2.05
SMC4-223ENST00000493695 SURF6O75683 361 aaKnown RBP2.27□□□□□ -2.05
SMC4-223ENST00000493695 TSPAN12O95859 305 aa2.27□□□□□ -2.05
SMC4-223ENST00000493695 OPN1MWP04001 364 aa2.27□□□□□ -2.05
SMC4-223ENST00000493695 P04436 131 aa2.27□□□□□ -2.05
SMC4-223ENST00000493695 OPN1MW2P0DN77 364 aa2.27□□□□□ -2.05
SMC4-223ENST00000493695 OPN1MW3P0DN78 364 aa2.27□□□□□ -2.05
SMC4-223ENST00000493695 CCDC130P13994 396 aa2.27□□□□□ -2.05
SMC4-223ENST00000493695 NCK1P16333 377 aa2.27□□□□□ -2.05
SMC4-223ENST00000493695 HMGB2P26583 209 aaKnown RBP2.27□□□□□ -2.05
SMC4-223ENST00000493695 BTCP35070 178 aa2.27□□□□□ -2.05
SMC4-223ENST00000493695 PRPHP41219 470 aa2.27□□□□□ -2.05
SMC4-223ENST00000493695 MAGEA8P43361 318 aa2.27□□□□□ -2.05
SMC4-223ENST00000493695 VDAC2P45880 294 aaPredicted RBP2.27□□□□□ -2.05
SMC4-223ENST00000493695 RPS10P46783 165 aaKnown RBP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms