RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 TMEM27Q9HBJ8 222 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 SLC25A19Q9HC21 320 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 CLEC5AQ9NY25 188 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 SEMA5BQ9P283 1151 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 SHPKQ9UHJ6 478 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 FNDC3AQ9Y2H6 1198 aaKnown RBP6.33□□□□□ -1.4
VPS13B-205ENST00000493587 SLCO1B1Q9Y6L6 691 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 V9GYS6 101 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 LAMA3Q16787 3333 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 ZNF705FA8MVS1 300 aaPredicted RBP6.33□□□□□ -1.4
VPS13B-205ENST00000493587 NPIPB8E9PQR5 432 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 FAM227AF5H4B4 570 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 SCGB1D1O95968 90 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 ZNF705DP0CH99 300 aaPredicted RBP6.33□□□□□ -1.4
VPS13B-205ENST00000493587 ZNF705BP0CI00 300 aaPredicted RBP6.33□□□□□ -1.4
VPS13B-205ENST00000493587 SNRPBP14678 240 aaKnown RBP6.33□□□□□ -1.4
VPS13B-205ENST00000493587 TBPP20226 339 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 S1PR1P21453 382 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 HTR2CP28335 458 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 TM4SF4P48230 202 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 RFX3P48380 749 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 CDKN2DP55273 166 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 OR10A3P58181 314 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 UBE2KP61086 200 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 ACSM1Q08AH1 577 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 ARL6IP1Q15041 203 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 ARHGAP11BQ3KRB8 267 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 Q6ZSR9 355 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 FAM129CQ86XR2 697 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 SLC35G3Q8N808 338 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 C2CD4AQ8NCU7 369 aaPredicted RBP6.33□□□□□ -1.4
VPS13B-205ENST00000493587 OR4C5Q8NGB2 326 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 OR52E4Q8NGH9 312 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 OR52I1Q8NGK6 324 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 OR4A4PQ8NGN8 299 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 OR8J1Q8NGP2 316 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 SLC35F5Q8WV83 523 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 WNT8BQ93098 351 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 RGMAQ96B86 450 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 OTUB2Q96DC9 234 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 MVB12AQ96EY5 273 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 GSX1Q9H4S2 264 aaPredicted RBP6.33□□□□□ -1.4
VPS13B-205ENST00000493587 CERS4Q9HA82 394 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 KCND3Q9UK17 655 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 PUS1Q9Y606 427 aaKnown RBP eCLIP6.33□□□□□ -1.4
VPS13B-205ENST00000493587 ELOA3CA0A087WX78 387 aaPredicted RBP6.33□□□□□ -1.4
VPS13B-205ENST00000493587 A0A1W2PPK0 400 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 ZNF320A2RRD8 509 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 YY2O15391 372 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 PCDH7O60245 1069 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 B3GALT4O96024 378 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 CSTAP01040 98 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 IL1RNP18510 177 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 LAG3P18627 525 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 CCR8P51685 355 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 RPL19P84098 196 aaKnown RBP6.33□□□□□ -1.4
VPS13B-205ENST00000493587 ELFN2Q5R3F8 820 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 PRAMEF17Q5VTA0 474 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 C1orf189Q5VU69 101 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 PAQR3Q6TCH7 311 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 IL34Q6ZMJ4 242 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 PAQR9Q6ZVX9 377 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 UBE3DQ7Z6J8 389 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 CRIPAKQ8N1N5 446 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 OR5R1Q8NH85 324 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 AUTS2Q8WXX7 1259 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 PHYHIPLQ96FC7 376 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 KIRREL1Q96J84 757 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 ALKBH7Q9BT30 221 aaPredicted RBP6.33□□□□□ -1.4
VPS13B-205ENST00000493587 TPSD1Q9BZJ3 242 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 SELENOIQ9C0D9 397 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 PCBD2Q9H0N5 130 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 LINC00597Q9H2U6 94 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 BRF2Q9HAW0 419 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 LPAR2Q9HBW0 351 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 NT5MQ9NPB1 228 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 TMPRSS4Q9NRS4 437 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 THSD1Q9NS62 852 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 FARSAQ9Y285 508 aaKnown RBP6.33□□□□□ -1.4
VPS13B-205ENST00000493587 ASB1Q9Y576 335 aa6.33□□□□□ -1.4
VPS13B-205ENST00000493587 MTCL1Q9Y4B5 1905 aaKnown RBP6.32□□□□□ -1.4
VPS13B-205ENST00000493587 SHISA3A0PJX4 238 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 ACOT7O00154 380 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 SCDO00767 359 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 NDUFS3O75489 264 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 MT-ND5P03915 603 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 SMIM10L2AP0DMW4 78 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 SMIM10L2BP0DMW5 78 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 ACAA2P42765 397 aaKnown RBP6.32□□□□□ -1.4
VPS13B-205ENST00000493587 VAMP2P63027 116 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 C2orf68Q2NKX9 166 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 ARSIQ5FYB1 569 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 PRAMEF8Q5VWM4 474 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 PRAMEF7Q5VXH5 474 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 SFXN4Q6P4A7 337 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 TRIM40Q6P9F5 258 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 ARL9Q6T311 187 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 CLEC20AQ6ZU45 233 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 CBLL1Q75N03 491 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 KCTD9Q7L273 389 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms