RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 A0A0B4J2E0 115 aa6□□□□□ -1.45
VPS52-219ENST00000493379 LOC102725191A0A1B0GVB3 256 aa6□□□□□ -1.45
VPS52-219ENST00000493379 A0A1B0GX12 115 aa6□□□□□ -1.45
VPS52-219ENST00000493379 CCT8L1PA6NM43 557 aa6□□□□□ -1.45
VPS52-219ENST00000493379 CLCA1A8K7I4 914 aa6□□□□□ -1.45
VPS52-219ENST00000493379 KDM4EB2RXH2 506 aaPredicted RBP6□□□□□ -1.45
VPS52-219ENST00000493379 H0YC42 278 aa6□□□□□ -1.45
VPS52-219ENST00000493379 TNFSF13O75888 250 aa6□□□□□ -1.45
VPS52-219ENST00000493379 CLDN14O95500 239 aa6□□□□□ -1.45
VPS52-219ENST00000493379 HEXAP06865 529 aa6□□□□□ -1.45
VPS52-219ENST00000493379 GKN3PP0CG01 181 aa6□□□□□ -1.45
VPS52-219ENST00000493379 UQCRBP14927 111 aa6□□□□□ -1.45
VPS52-219ENST00000493379 GGT1P19440 569 aa6□□□□□ -1.45
VPS52-219ENST00000493379 ME2P23368 584 aa6□□□□□ -1.45
VPS52-219ENST00000493379 CTSSP25774 331 aa6□□□□□ -1.45
VPS52-219ENST00000493379 HTR2AP28223 471 aa6□□□□□ -1.45
VPS52-219ENST00000493379 SHC1P29353 583 aa6□□□□□ -1.45
VPS52-219ENST00000493379 TACR3P29371 465 aa6□□□□□ -1.45
VPS52-219ENST00000493379 CHRNB4P30926 498 aa6□□□□□ -1.45
VPS52-219ENST00000493379 OPRM1P35372 400 aa6□□□□□ -1.45
VPS52-219ENST00000493379 NUDT2P50583 147 aa6□□□□□ -1.45
VPS52-219ENST00000493379 TPD52P55327 224 aaPredicted RBP6□□□□□ -1.45
VPS52-219ENST00000493379 CARD18P57730 90 aa6□□□□□ -1.45
VPS52-219ENST00000493379 RPS3AP61247 264 aaKnown RBP6□□□□□ -1.45
VPS52-219ENST00000493379 EGR4Q05215 589 aa6□□□□□ -1.45
VPS52-219ENST00000493379 MERTKQ12866 999 aa6□□□□□ -1.45
VPS52-219ENST00000493379 BNIP1Q12981 228 aa6□□□□□ -1.45
VPS52-219ENST00000493379 CDSNQ15517 529 aa6□□□□□ -1.45
VPS52-219ENST00000493379 NPTX1Q15818 432 aa6□□□□□ -1.45
VPS52-219ENST00000493379 SLC25A35Q3KQZ1 300 aa6□□□□□ -1.45
VPS52-219ENST00000493379 TMEM176BQ3YBM2 270 aaPredicted RBP6□□□□□ -1.45
VPS52-219ENST00000493379 SYT14P1Q58G82 188 aa6□□□□□ -1.45
VPS52-219ENST00000493379 SAMD4BQ5PRF9 694 aaKnown RBP6□□□□□ -1.45
VPS52-219ENST00000493379 PDSS1Q5T2R2 415 aa6□□□□□ -1.45
VPS52-219ENST00000493379 OR2A2Q6IF42 318 aa6□□□□□ -1.45
VPS52-219ENST00000493379 PGM2L1Q6PCE3 622 aa6□□□□□ -1.45
VPS52-219ENST00000493379 ZNF613Q6PF04 617 aa6□□□□□ -1.45
VPS52-219ENST00000493379 ULK3Q6PHR2 472 aa6□□□□□ -1.45
VPS52-219ENST00000493379 C5orf46Q6UWT4 87 aa6□□□□□ -1.45
VPS52-219ENST00000493379 NHLRC1Q6VVB1 395 aa6□□□□□ -1.45
VPS52-219ENST00000493379 LIX1LQ8IVB5 337 aa6□□□□□ -1.45
VPS52-219ENST00000493379 SLC43A2Q8N370 569 aa6□□□□□ -1.45
VPS52-219ENST00000493379 ZNF614Q8N883 585 aa6□□□□□ -1.45
VPS52-219ENST00000493379 ZNF610Q8N9Z0 462 aa6□□□□□ -1.45
VPS52-219ENST00000493379 C9orf106Q8NAJ2 232 aa6□□□□□ -1.45
VPS52-219ENST00000493379 NAXEQ8NCW5 288 aa6□□□□□ -1.45
VPS52-219ENST00000493379 RBM15BQ8NDT2 890 aaKnown RBP6□□□□□ -1.45
VPS52-219ENST00000493379 TNIP2Q8NFZ5 429 aa6□□□□□ -1.45
VPS52-219ENST00000493379 OR4D11Q8NGI4 311 aa6□□□□□ -1.45
VPS52-219ENST00000493379 OR6T1Q8NGN1 323 aa6□□□□□ -1.45
VPS52-219ENST00000493379 OR5M1Q8NGP8 315 aa6□□□□□ -1.45
VPS52-219ENST00000493379 OR10D3Q8NH80 312 aa6□□□□□ -1.45
VPS52-219ENST00000493379 OR2V1Q8NHB1 315 aa6□□□□□ -1.45
VPS52-219ENST00000493379 RNF128Q8TEB7 428 aa6□□□□□ -1.45
VPS52-219ENST00000493379 POP5Q969H6 163 aaKnown RBP6□□□□□ -1.45
VPS52-219ENST00000493379 CPNE4Q96A23 557 aaPredicted RBP6□□□□□ -1.45
VPS52-219ENST00000493379 SLC7A6OSQ96CW6 309 aaPredicted RBP6□□□□□ -1.45
VPS52-219ENST00000493379 ZNF559Q9BR84 538 aa6□□□□□ -1.45
VPS52-219ENST00000493379 SFXN3Q9BWM7 321 aa6□□□□□ -1.45
VPS52-219ENST00000493379 TRIM2Q9C040 744 aa6□□□□□ -1.45
VPS52-219ENST00000493379 ENKD1Q9H0I2 346 aa6□□□□□ -1.45
VPS52-219ENST00000493379 MS4A5Q9H3V2 200 aa6□□□□□ -1.45
VPS52-219ENST00000493379 ZMAT4Q9H898 229 aa6□□□□□ -1.45
VPS52-219ENST00000493379 BCO1Q9HAY6 547 aa6□□□□□ -1.45
VPS52-219ENST00000493379 MCCC2Q9HCC0 563 aa6□□□□□ -1.45
VPS52-219ENST00000493379 FANCFQ9NPI8 374 aa6□□□□□ -1.45
VPS52-219ENST00000493379 TIGARQ9NQ88 270 aa6□□□□□ -1.45
VPS52-219ENST00000493379 PLSCR4Q9NRQ2 329 aa6□□□□□ -1.45
VPS52-219ENST00000493379 CCM2LQ9NUG4 571 aaPredicted RBP6□□□□□ -1.45
VPS52-219ENST00000493379 DCAF13Q9NV06 445 aaKnown RBP6□□□□□ -1.45
VPS52-219ENST00000493379 KLHL28Q9NXS3 571 aa6□□□□□ -1.45
VPS52-219ENST00000493379 BAG5Q9UL15 447 aa6□□□□□ -1.45
VPS52-219ENST00000493379 RNF6Q9Y252 685 aa6□□□□□ -1.45
VPS52-219ENST00000493379 TMED7Q9Y3B3 224 aa6□□□□□ -1.45
VPS52-219ENST00000493379 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6□□□□□ -1.457e-10■■■□□ 18
VPS52-219ENST00000493379 ZANQ9Y493 2812 aa6□□□□□ -1.45
VPS52-219ENST00000493379 HIVEP2P31629 2446 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 A0A1B0GWA3 101 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 TMEM72A0PK05 275 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 HTR3EA5X5Y0 456 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 ZNF724A8MTY0 619 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 A8MVM7 634 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 FTCDNL1E5RQL4 147 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 H0Y3Z8 333 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 H3BML4 177 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 CXCR6O00574 342 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 PSPNO60542 156 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 CYTIPO60759 359 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 SS18L1O75177 396 aaPredicted RBP5.99□□□□□ -1.45
VPS52-219ENST00000493379 AQP8O94778 261 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 NUDT14O95848 222 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 LY6G6DO95868 133 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 THY1P04216 161 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 SEMG1P04279 462 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 TSPAN19P0C672 248 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 THRBP10828 461 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 PNMTP11086 282 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 FCGR2AP12318 317 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 RYKP34925 604 aa5.99□□□□□ -1.45
VPS52-219ENST00000493379 P2RY4P51582 365 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms