RNA–Protein interactions for RNA: ENST00000492980.1

CCDC88B-208, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 5

Gene CCDC88B, Length 2,118 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-208ENST00000492980 DCDP81605 110 aaKnown RBP19.16■□□□□ 0.66
CCDC88B-208ENST00000492980 EMC4Q5J8M3 183 aa19.16■□□□□ 0.66
CCDC88B-208ENST00000492980 C1QL3Q5VWW1 255 aa19.16■□□□□ 0.66
CCDC88B-208ENST00000492980 ZNF385CQ66K41 422 aaPredicted RBP19.16■□□□□ 0.66
CCDC88B-208ENST00000492980 MS4A15Q8N5U1 240 aa19.16■□□□□ 0.66
CCDC88B-208ENST00000492980 OR13C5Q8NGS8 318 aa19.16■□□□□ 0.66
CCDC88B-208ENST00000492980 EDAQ92838 391 aa19.16■□□□□ 0.66
CCDC88B-208ENST00000492980 SMIM19Q96E16 107 aa19.16■□□□□ 0.66
CCDC88B-208ENST00000492980 TSSK2Q96PF2 358 aa19.16■□□□□ 0.66
CCDC88B-208ENST00000492980 GAREM1Q9H706 876 aa19.16■□□□□ 0.66
CCDC88B-208ENST00000492980 EXPH5Q8NEV8 1989 aa19.16■□□□□ 0.66
CCDC88B-208ENST00000492980 SPEGQ15772 3267 aa19.15■□□□□ 0.66
CCDC88B-208ENST00000492980 A0A1W2PRG6 482 aa19.15■□□□□ 0.66
CCDC88B-208ENST00000492980 HIST1H2ABP04908 130 aa19.15■□□□□ 0.66
CCDC88B-208ENST00000492980 QPRTQ15274 297 aa19.15■□□□□ 0.66
CCDC88B-208ENST00000492980 ACSM3Q53FZ2 586 aa19.15■□□□□ 0.66
CCDC88B-208ENST00000492980 PYDC2Q56P42 97 aa19.15■□□□□ 0.66
CCDC88B-208ENST00000492980 MESTQ5EB52 335 aa19.15■□□□□ 0.66
CCDC88B-208ENST00000492980 HBMQ6B0K9 141 aa19.15■□□□□ 0.66
CCDC88B-208ENST00000492980 HIST3H2AQ7L7L0 130 aa19.15■□□□□ 0.66
CCDC88B-208ENST00000492980 ACOT12Q8WYK0 555 aa19.15■□□□□ 0.66
CCDC88B-208ENST00000492980 HIST1H2ACQ93077 130 aa19.15■□□□□ 0.66
CCDC88B-208ENST00000492980 NDEL1Q9GZM8 345 aa19.15■□□□□ 0.66
CCDC88B-208ENST00000492980 GRHPRQ9UBQ7 328 aa19.15■□□□□ 0.66
CCDC88B-208ENST00000492980 GNG8Q9UK08 70 aa19.15■□□□□ 0.66
CCDC88B-208ENST00000492980 NPFFR2Q9Y5X5 522 aa19.15■□□□□ 0.66
CCDC88B-208ENST00000492980 PCNX3Q9H6A9 2034 aa19.15■□□□□ 0.66
CCDC88B-208ENST00000492980 CPNE3O75131 537 aaKnown RBP19.15■□□□□ 0.66
CCDC88B-208ENST00000492980 CFIP05156 583 aa19.15■□□□□ 0.66
CCDC88B-208ENST00000492980 MYL9P24844 172 aa19.15■□□□□ 0.66
CCDC88B-208ENST00000492980 EVX1P49640 407 aa19.15■□□□□ 0.66
CCDC88B-208ENST00000492980 GDI2P50395 445 aaKnown RBP19.15■□□□□ 0.66
CCDC88B-208ENST00000492980 SIRPAP78324 504 aa19.15■□□□□ 0.66
CCDC88B-208ENST00000492980 HSF2Q03933 536 aa19.15■□□□□ 0.66
CCDC88B-208ENST00000492980 MADCAM1Q13477 382 aa19.15■□□□□ 0.66
CCDC88B-208ENST00000492980 SPATC1Q76KD6 591 aa19.15■□□□□ 0.66
CCDC88B-208ENST00000492980 OVCH1Q7RTY7 1134 aa19.15■□□□□ 0.66
CCDC88B-208ENST00000492980 NRARPQ7Z6K4 114 aa19.15■□□□□ 0.66
CCDC88B-208ENST00000492980 DEFB123Q8N688 67 aa19.15■□□□□ 0.66
CCDC88B-208ENST00000492980 GPR119Q8TDV5 335 aa19.15■□□□□ 0.66
CCDC88B-208ENST00000492980 NAT6Q93015 286 aa19.15■□□□□ 0.66
CCDC88B-208ENST00000492980 PTDSS2Q9BVG9 487 aa19.15■□□□□ 0.66
CCDC88B-208ENST00000492980 PPP1R3EQ9H7J1 279 aa19.15■□□□□ 0.66
CCDC88B-208ENST00000492980 ACOXLQ9NUZ1 547 aa19.15■□□□□ 0.66
CCDC88B-208ENST00000492980 SEC14L5O43304 696 aa19.14■□□□□ 0.65
CCDC88B-208ENST00000492980 ZNF354AO60765 605 aaPredicted RBP19.14■□□□□ 0.65
CCDC88B-208ENST00000492980 RFX2P48378 723 aa19.14■□□□□ 0.65
CCDC88B-208ENST00000492980 POLR2HP52434 150 aaKnown RBP19.14■□□□□ 0.65
CCDC88B-208ENST00000492980 SCN1BQ07699 218 aa19.14■□□□□ 0.65
CCDC88B-208ENST00000492980 IDNKQ5T6J7 187 aa19.14■□□□□ 0.65
CCDC88B-208ENST00000492980 METAP1DQ6UB28 335 aaPredicted RBP19.14■□□□□ 0.65
CCDC88B-208ENST00000492980 TPRA1Q86W33 373 aa19.14■□□□□ 0.65
CCDC88B-208ENST00000492980 CELF2-AS1Q8N7Q2 184 aa19.14■□□□□ 0.65
CCDC88B-208ENST00000492980 TEX19Q8NA77 164 aa19.14■□□□□ 0.65
CCDC88B-208ENST00000492980 ITPKCQ96DU7 683 aa19.14■□□□□ 0.65
CCDC88B-208ENST00000492980 DNAJA3Q96EY1 480 aa19.14■□□□□ 0.65
CCDC88B-208ENST00000492980 ZNF346Q9UL40 294 aaKnown RBP19.14■□□□□ 0.65
CCDC88B-208ENST00000492980 PPIEQ9UNP9 301 aaKnown RBP19.14■□□□□ 0.65
CCDC88B-208ENST00000492980 MOKQ9UQ07 419 aa19.14■□□□□ 0.65
CCDC88B-208ENST00000492980 ASCC3Q8N3C0 2202 aaKnown RBP19.14■□□□□ 0.65
CCDC88B-208ENST00000492980 TMED7-TICAM2A0A0A6YYA0 188 aa19.13■□□□□ 0.65
CCDC88B-208ENST00000492980 TMEM72A0PK05 275 aa19.13■□□□□ 0.65
CCDC88B-208ENST00000492980 VSTM2BA6NLU5 285 aa19.13■□□□□ 0.65
CCDC88B-208ENST00000492980 SNPHO15079 494 aa19.13■□□□□ 0.65
CCDC88B-208ENST00000492980 YKT6O15498 198 aa19.13■□□□□ 0.65
CCDC88B-208ENST00000492980 SUSD5O60279 629 aa19.13■□□□□ 0.65
CCDC88B-208ENST00000492980 SLC25A12O75746 678 aa19.13■□□□□ 0.65
CCDC88B-208ENST00000492980 ONECUT2O95948 504 aa19.13■□□□□ 0.65
CCDC88B-208ENST00000492980 APEX1P27695 318 aaKnown RBP19.13■□□□□ 0.65
CCDC88B-208ENST00000492980 TAB1Q15750 504 aa19.13■□□□□ 0.65
CCDC88B-208ENST00000492980 RPL22L1Q6P5R6 122 aaKnown RBP19.13■□□□□ 0.65
CCDC88B-208ENST00000492980 ZNF511Q8NB15 262 aa19.13■□□□□ 0.65
CCDC88B-208ENST00000492980 OR2I1PQ8NGU4 316 aa19.13■□□□□ 0.65
CCDC88B-208ENST00000492980 DUSP19Q8WTR2 217 aa19.13■□□□□ 0.65
CCDC88B-208ENST00000492980 MRPL48Q96GC5 212 aaKnown RBP19.13■□□□□ 0.65
CCDC88B-208ENST00000492980 RXFP3Q9NSD7 469 aa19.13■□□□□ 0.65
CCDC88B-208ENST00000492980 TAS2R5Q9NYW4 299 aa19.13■□□□□ 0.65
CCDC88B-208ENST00000492980 TMED7Q9Y3B3 224 aa19.13■□□□□ 0.65
CCDC88B-208ENST00000492980 A0A0G2JK05 382 aa19.13■□□□□ 0.65
CCDC88B-208ENST00000492980 H7C1C5 153 aa19.13■□□□□ 0.65
CCDC88B-208ENST00000492980 NPIPB7O75200 414 aa19.13■□□□□ 0.65
CCDC88B-208ENST00000492980 CD1AP06126 327 aa19.13■□□□□ 0.65
CCDC88B-208ENST00000492980 GRPRP30550 384 aa19.13■□□□□ 0.65
CCDC88B-208ENST00000492980 EMP2P54851 167 aa19.13■□□□□ 0.65
CCDC88B-208ENST00000492980 OR10A3P58181 314 aa19.13■□□□□ 0.65
CCDC88B-208ENST00000492980 LCN6P62502 163 aa19.13■□□□□ 0.65
CCDC88B-208ENST00000492980 ASAH1Q13510 395 aa19.13■□□□□ 0.65
CCDC88B-208ENST00000492980 EFR3AQ14156 821 aa19.13■□□□□ 0.65
CCDC88B-208ENST00000492980 GPR139Q6DWJ6 353 aa19.13■□□□□ 0.65
CCDC88B-208ENST00000492980 ADGRG3Q86Y34 549 aa19.13■□□□□ 0.65
CCDC88B-208ENST00000492980 NUBPLQ8TB37 319 aa19.13■□□□□ 0.65
CCDC88B-208ENST00000492980 METTL21AQ8WXB1 218 aa19.13■□□□□ 0.65
CCDC88B-208ENST00000492980 THAP4Q8WY91 577 aa19.13■□□□□ 0.65
CCDC88B-208ENST00000492980 TXNDC15Q96J42 360 aa19.13■□□□□ 0.65
CCDC88B-208ENST00000492980 WDR77Q9BQA1 342 aaPredicted RBP19.13■□□□□ 0.65
CCDC88B-208ENST00000492980 APMAPQ9HDC9 416 aa19.13■□□□□ 0.65
CCDC88B-208ENST00000492980 TAS2R10Q9NYW0 307 aa19.13■□□□□ 0.65
CCDC88B-208ENST00000492980 MALT1Q9UDY8 824 aa19.13■□□□□ 0.65
CCDC88B-208ENST00000492980 PRR32B1ATL7 298 aa19.12■□□□□ 0.65
CCDC88B-208ENST00000492980 DCTN6O00399 190 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms