RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 PINLYPA6NC86 204 aa12.71□□□□□ -0.38
PDZRN3-210ENST00000492909 H3BML4 177 aa12.71□□□□□ -0.38
PDZRN3-210ENST00000492909 KLRC4-KLRK1H3BQV0 150 aa12.71□□□□□ -0.38
PDZRN3-210ENST00000492909 EFNA2O43921 213 aa12.71□□□□□ -0.38
PDZRN3-210ENST00000492909 ZIC3O60481 467 aa12.71□□□□□ -0.38
PDZRN3-210ENST00000492909 MPZL2O60487 215 aa12.71□□□□□ -0.38
PDZRN3-210ENST00000492909 FADS2O95864 444 aaKnown RBP12.71□□□□□ -0.38
PDZRN3-210ENST00000492909 BGLAPP02818 100 aa12.71□□□□□ -0.38
PDZRN3-210ENST00000492909 RFPL3SP0C7P2 107 aa12.71□□□□□ -0.38
PDZRN3-210ENST00000492909 ASAH2BP0C7U1 165 aa12.71□□□□□ -0.38
PDZRN3-210ENST00000492909 OCM2P0CE71 109 aa12.71□□□□□ -0.38
PDZRN3-210ENST00000492909 OCMP0CE72 109 aaPredicted RBP12.71□□□□□ -0.38
PDZRN3-210ENST00000492909 ZNF17P17021 662 aa12.71□□□□□ -0.38
PDZRN3-210ENST00000492909 FKBP2P26885 142 aaKnown RBP12.71□□□□□ -0.38
PDZRN3-210ENST00000492909 CXADRP78310 365 aa12.71□□□□□ -0.38
PDZRN3-210ENST00000492909 FOXK1P85037 733 aa12.71□□□□□ -0.38
PDZRN3-210ENST00000492909 LTBQ06643 244 aa12.71□□□□□ -0.38
PDZRN3-210ENST00000492909 SELENBP1Q13228 472 aa12.71□□□□□ -0.38
PDZRN3-210ENST00000492909 FHL1Q13642 323 aa12.71□□□□□ -0.38
PDZRN3-210ENST00000492909 GLYR1Q49A26 553 aaPredicted RBP12.71□□□□□ -0.38
PDZRN3-210ENST00000492909 RAET1LQ5VY80 246 aa12.71□□□□□ -0.38
PDZRN3-210ENST00000492909 ACSM5Q6NUN0 579 aa12.71□□□□□ -0.38
PDZRN3-210ENST00000492909 GALNTL5Q7Z4T8 443 aa12.71□□□□□ -0.38
PDZRN3-210ENST00000492909 P2RY8Q86VZ1 359 aa12.71□□□□□ -0.38
PDZRN3-210ENST00000492909 SLC43A2Q8N370 569 aa12.71□□□□□ -0.38
PDZRN3-210ENST00000492909 ATP6V1C2Q8NEY4 427 aa12.71□□□□□ -0.38
PDZRN3-210ENST00000492909 OR5M1Q8NGP8 315 aa12.71□□□□□ -0.38
PDZRN3-210ENST00000492909 SLC25A43Q8WUT9 341 aaPredicted RBP12.71□□□□□ -0.38
PDZRN3-210ENST00000492909 WDR12Q9GZL7 423 aaKnown RBP12.71□□□□□ -0.38
PDZRN3-210ENST00000492909 UBQLN3Q9H347 655 aa12.71□□□□□ -0.38
PDZRN3-210ENST00000492909 AKIP1Q9NQ31 210 aa12.71□□□□□ -0.38
PDZRN3-210ENST00000492909 B4GALT7Q9UBV7 327 aa12.71□□□□□ -0.38
PDZRN3-210ENST00000492909 NDUFB2O95178 105 aa12.7□□□□□ -0.38
PDZRN3-210ENST00000492909 HIST1H2ABP04908 130 aa12.7□□□□□ -0.38
PDZRN3-210ENST00000492909 HNRNPCP07910 306 aaKnown RBP eCLIP12.7□□□□□ -0.38
PDZRN3-210ENST00000492909 TFPIP10646 304 aa12.7□□□□□ -0.38
PDZRN3-210ENST00000492909 IL11P20809 199 aa12.7□□□□□ -0.38
PDZRN3-210ENST00000492909 PSMB9P28065 219 aa12.7□□□□□ -0.38
PDZRN3-210ENST00000492909 SLC6A6P31641 620 aa12.7□□□□□ -0.38
PDZRN3-210ENST00000492909 TNFSF10P50591 281 aa12.7□□□□□ -0.38
PDZRN3-210ENST00000492909 PRPS1P60891 318 aa12.7□□□□□ -0.38
PDZRN3-210ENST00000492909 RPS4XP62701 263 aaKnown RBP12.7□□□□□ -0.38
PDZRN3-210ENST00000492909 DGUOKQ16854 277 aa12.7□□□□□ -0.38
PDZRN3-210ENST00000492909 RGS21Q2M5E4 152 aa12.7□□□□□ -0.38
PDZRN3-210ENST00000492909 TMEM44Q2T9K0 475 aa12.7□□□□□ -0.38
PDZRN3-210ENST00000492909 SYT14P1Q58G82 188 aa12.7□□□□□ -0.38
PDZRN3-210ENST00000492909 UBE2UQ5VVX9 321 aa12.7□□□□□ -0.38
PDZRN3-210ENST00000492909 THSD4Q6ZMP0 1018 aa12.7□□□□□ -0.38
PDZRN3-210ENST00000492909 PTCHD4Q6ZW05 846 aa12.7□□□□□ -0.38
PDZRN3-210ENST00000492909 HIST3H2AQ7L7L0 130 aa12.7□□□□□ -0.38
PDZRN3-210ENST00000492909 MAMDC2Q7Z304 686 aaPredicted RBP12.7□□□□□ -0.38
PDZRN3-210ENST00000492909 NANOGNBQ7Z5D8 188 aa12.7□□□□□ -0.38
PDZRN3-210ENST00000492909 TMEM178AQ8NBL3 297 aa12.7□□□□□ -0.38
PDZRN3-210ENST00000492909 OR6S1Q8NH40 331 aa12.7□□□□□ -0.38
PDZRN3-210ENST00000492909 RHOXF1Q8NHV9 184 aa12.7□□□□□ -0.38
PDZRN3-210ENST00000492909 S100ZQ8WXG8 99 aa12.7□□□□□ -0.38
PDZRN3-210ENST00000492909 HIST1H2ACQ93077 130 aa12.7□□□□□ -0.38
PDZRN3-210ENST00000492909 SLC25A36Q96CQ1 311 aa12.7□□□□□ -0.38
PDZRN3-210ENST00000492909 SLC38A2Q96QD8 506 aa12.7□□□□□ -0.38
PDZRN3-210ENST00000492909 PIGQQ9BRB3 760 aa12.7□□□□□ -0.38
PDZRN3-210ENST00000492909 RHNO1Q9BSD3 238 aa12.7□□□□□ -0.38
PDZRN3-210ENST00000492909 IFT27Q9BW83 186 aa12.7□□□□□ -0.38
PDZRN3-210ENST00000492909 POTEKPQ9BYX7 375 aa12.7□□□□□ -0.38
PDZRN3-210ENST00000492909 ENKD1Q9H0I2 346 aa12.7□□□□□ -0.38
PDZRN3-210ENST00000492909 HMG20AQ9NP66 347 aa12.7□□□□□ -0.38
PDZRN3-210ENST00000492909 PLCXD1Q9NUJ7 323 aa12.7□□□□□ -0.38
PDZRN3-210ENST00000492909 TVP23BQ9NYZ1 205 aa12.7□□□□□ -0.38
PDZRN3-210ENST00000492909 USP24Q9UPU5 2620 aa12.7□□□□□ -0.38
PDZRN3-210ENST00000492909 HIF3AQ9Y2N7 669 aa12.7□□□□□ -0.38
PDZRN3-210ENST00000492909 MRPS18CQ9Y3D5 142 aaKnown RBP12.7□□□□□ -0.38
PDZRN3-210ENST00000492909 MGAQ8IWI9 3026 aa12.69□□□□□ -0.38
PDZRN3-210ENST00000492909 BLOC1S5-TXNDC5H3BN57 136 aa12.69□□□□□ -0.38
PDZRN3-210ENST00000492909 M0R129 80 aa12.69□□□□□ -0.38
PDZRN3-210ENST00000492909 M0R3G1 203 aa12.69□□□□□ -0.38
PDZRN3-210ENST00000492909 PEPDP12955 493 aa12.69□□□□□ -0.38
PDZRN3-210ENST00000492909 GDF1P27539 372 aa12.69□□□□□ -0.38
PDZRN3-210ENST00000492909 IDUAP35475 653 aa12.69□□□□□ -0.38
PDZRN3-210ENST00000492909 SERPINB10P48595 397 aa12.69□□□□□ -0.38
PDZRN3-210ENST00000492909 CLK1P49759 484 aaKnown RBP12.69□□□□□ -0.38
PDZRN3-210ENST00000492909 TMPRSS3P57727 454 aa12.69□□□□□ -0.38
PDZRN3-210ENST00000492909 PGGHGQ32M88 737 aa12.69□□□□□ -0.38
PDZRN3-210ENST00000492909 ZNF766Q5HY98 468 aa12.69□□□□□ -0.38
PDZRN3-210ENST00000492909 SLC6A19Q695T7 634 aa12.69□□□□□ -0.38
PDZRN3-210ENST00000492909 LNX2Q8N448 690 aa12.69□□□□□ -0.38
PDZRN3-210ENST00000492909 OR8J1Q8NGP2 316 aa12.69□□□□□ -0.38
PDZRN3-210ENST00000492909 OR4Q3Q8NH05 313 aa12.69□□□□□ -0.38
PDZRN3-210ENST00000492909 OR14L1PQ8NHC6 308 aa12.69□□□□□ -0.38
PDZRN3-210ENST00000492909 MFSD8Q8NHS3 518 aa12.69□□□□□ -0.38
PDZRN3-210ENST00000492909 NDNFQ8TB73 568 aa12.69□□□□□ -0.38
PDZRN3-210ENST00000492909 DYNC2LI1Q8TCX1 351 aa12.69□□□□□ -0.38
PDZRN3-210ENST00000492909 FCGR1BQ92637 280 aa12.69□□□□□ -0.38
PDZRN3-210ENST00000492909 DNAJA3Q96EY1 480 aa12.69□□□□□ -0.38
PDZRN3-210ENST00000492909 SCMH1Q96GD3 660 aa12.69□□□□□ -0.38
PDZRN3-210ENST00000492909 ARL5BQ96KC2 179 aa12.69□□□□□ -0.38
PDZRN3-210ENST00000492909 IL4I1Q96RQ9 567 aa12.69□□□□□ -0.38
PDZRN3-210ENST00000492909 UBL7Q96S82 380 aaPredicted RBP12.69□□□□□ -0.38
PDZRN3-210ENST00000492909 SMAD5Q99717 465 aaKnown RBP12.69□□□□□ -0.38
PDZRN3-210ENST00000492909 ZNF226Q9NYT6 803 aa12.69□□□□□ -0.38
PDZRN3-210ENST00000492909 MED12Q93074 2177 aa12.69□□□□□ -0.38
PDZRN3-210ENST00000492909 OR2M5A3KFT3 312 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms