RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 APRTP07741 180 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 WNT2P09544 360 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 RAP2AP10114 183 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 ETFAP13804 333 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 GABRA1P14867 456 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 ZNF43P17038 809 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 MARK3P27448 753 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 EPHA2P29317 976 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 DAP3P51398 398 aaKnown RBP3.8□□□□□ -1.8
BRCA1-220ENST00000492859 LBX1P52954 281 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 TPTEP56180 551 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 CLDN12P56749 244 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 CLDN2P57739 230 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 LILRA4P59901 499 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 RAB2AP61019 212 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 RAB10P61026 200 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 SLC10A7Q0GE19 358 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 ST3GAL3Q11203 375 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 TCF15Q12870 199 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 IKZF1Q13422 519 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 ATP6V1FQ16864 119 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 ZSWIM7Q19AV6 140 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 PLEKHN1Q494U1 663 aaPredicted RBP3.8□□□□□ -1.8
BRCA1-220ENST00000492859 C19orf54Q5BKX5 351 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 DNLZQ5SXM8 178 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 UBE2UQ5VVX9 321 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 RESP18Q5W5W9 173 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 TMEM200BQ69YZ2 307 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 C22orf42Q6IC83 251 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 FAM166AQ6J272 317 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 SYCE2Q6PIF2 218 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 CD200R1LQ6Q8B3 271 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 ZNF517Q6ZMY9 492 aaPredicted RBP3.8□□□□□ -1.8
BRCA1-220ENST00000492859 TMPRSS11FQ6ZWK6 438 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 TCF24Q7RTU0 167 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 CHSY1Q86X52 802 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 COMMD2Q86X83 199 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 CIR1Q86X95 450 aaPredicted RBP3.8□□□□□ -1.8
BRCA1-220ENST00000492859 SYT12Q8IV01 421 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 APRG1Q8IVJ8 170 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 ZBTB8OSQ8IWT0 167 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 FAM126BQ8IXS8 530 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 RDH10Q8IZV5 341 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 CENPSQ8N2Z9 138 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 EIF4E3Q8N5X7 224 aaKnown RBP3.8□□□□□ -1.8
BRCA1-220ENST00000492859 LRRC52Q8N7C0 313 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 ZNF611Q8N823 705 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 NOXO1Q8NFA2 376 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 OR56A4Q8NGH8 313 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 OR9Q1Q8NGQ5 310 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 OR14K1Q8NGZ2 314 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 OR2AE1Q8NHA4 323 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 LYPD6BQ8NI32 183 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 LNX1Q8TBB1 728 aaPredicted RBP3.8□□□□□ -1.8
BRCA1-220ENST00000492859 GPR151Q8TDV0 419 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 ASB17Q8WXJ9 295 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 GHSRQ92847 366 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 EXTL1Q92935 676 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 APH1AQ96BI3 265 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 RAB39BQ96DA2 213 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 Q96MT0 163 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 ZNF641Q96N77 438 aaPredicted RBP3.8□□□□□ -1.8
BRCA1-220ENST00000492859 KLHL32Q96NJ5 620 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 DCLRE1CQ96SD1 692 aaKnown RBP3.8□□□□□ -1.8
BRCA1-220ENST00000492859 HCAR1Q9BXC0 346 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 CDCA4Q9BXL8 241 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 KATNBL1Q9H079 304 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 MIXL1Q9H2W2 232 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 CXorf36Q9H7Y0 433 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 ISYNA1Q9NPH2 558 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 TPSG1Q9NRR2 321 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 ACOXLQ9NUZ1 547 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 DDIT4Q9NX09 232 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 GLTPQ9NZD2 209 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 JKAMPQ9P055 326 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 OR14J1Q9UGF5 321 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 SLC12A6Q9UHW9 1150 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 ZNF223Q9UK11 482 aaPredicted RBP3.8□□□□□ -1.8
BRCA1-220ENST00000492859 HHLA2Q9UM44 414 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 RAP2CQ9Y3L5 183 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 RBM8AQ9Y5S9 174 aaKnown RBP3.8□□□□□ -1.8
BRCA1-220ENST00000492859 ACTL7BQ9Y614 415 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 ZNFX1Q9P2E3 1918 aaKnown RBP3.8□□□□□ -1.8
BRCA1-220ENST00000492859 BAZ1AQ9NRL2 1556 aaPredicted RBP3.8□□□□□ -1.8
BRCA1-220ENST00000492859 ARAP1Q96P48 1450 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 USP47Q96K76 1375 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 PPIAL4CA0A0B4J2A2 164 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 A0A1W2PPK0 400 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 A0A1W2PR80 420 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 A0A1W2PRD5 423 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 CCDC160A6NGH7 325 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 SMIM9A6NGZ8 99 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 FTCDNL1E5RQL4 147 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 J3QLI3 93 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 ACOT8O14734 319 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 SCO1O75880 301 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 CYP7B1O75881 506 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 SUPT7LO94864 414 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 GJB5O95377 273 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 GPR75O95800 540 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms