RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 PCDHB10Q9UN67 800 aa9.5□□□□□ -0.89
SND1-215ENST00000492772 USP22Q9UPT9 525 aa9.5□□□□□ -0.89
SND1-215ENST00000492772 PKD1L1Q8TDX9 2849 aa9.5□□□□□ -0.89
SND1-215ENST00000492772 LYNX1G3V0Z9 82 aa9.49□□□□□ -0.89
SND1-215ENST00000492772 SLC43A1O75387 559 aa9.49□□□□□ -0.89
SND1-215ENST00000492772 NUDT17P0C025 328 aa9.49□□□□□ -0.89
SND1-215ENST00000492772 TFPTP0C1Z6 253 aa9.49□□□□□ -0.89
SND1-215ENST00000492772 LYNX1P0DP58 116 aa9.49□□□□□ -0.89
SND1-215ENST00000492772 ACHEP22303 614 aa9.49□□□□□ -0.89
SND1-215ENST00000492772 ARRB2P32121 409 aa9.49□□□□□ -0.89
SND1-215ENST00000492772 ARFIP2P53365 341 aa9.49□□□□□ -0.89
SND1-215ENST00000492772 CLNS1AP54105 237 aaKnown RBP9.49□□□□□ -0.89
SND1-215ENST00000492772 ARF1P84077 181 aaKnown RBP9.49□□□□□ -0.89
SND1-215ENST00000492772 CASP8Q14790 479 aa9.49□□□□□ -0.89
SND1-215ENST00000492772 SYPL1Q16563 259 aa9.49□□□□□ -0.89
SND1-215ENST00000492772 LIN52Q52LA3 116 aa9.49□□□□□ -0.89
SND1-215ENST00000492772 C1orf140Q5VVS0 124 aa9.49□□□□□ -0.89
SND1-215ENST00000492772 WBP2NLQ6ICG8 309 aa9.49□□□□□ -0.89
SND1-215ENST00000492772 KRT80Q6KB66 452 aa9.49□□□□□ -0.89
SND1-215ENST00000492772 LSRQ86X29 649 aaPredicted RBP9.49□□□□□ -0.89
SND1-215ENST00000492772 RNF130Q86XS8 419 aa9.49□□□□□ -0.89
SND1-215ENST00000492772 PEX5LQ8IYB4 626 aa9.49□□□□□ -0.89
SND1-215ENST00000492772 GSPT2Q8IYD1 628 aaKnown RBP9.49□□□□□ -0.89
SND1-215ENST00000492772 TRIML2Q8N7C3 387 aa9.49□□□□□ -0.89
SND1-215ENST00000492772 MRPL24Q96A35 216 aaKnown RBP9.49□□□□□ -0.89
SND1-215ENST00000492772 CCDC115Q96NT0 180 aa9.49□□□□□ -0.89
SND1-215ENST00000492772 MS4A5Q9H3V2 200 aa9.49□□□□□ -0.89
SND1-215ENST00000492772 CRLF2Q9HC73 371 aa9.49□□□□□ -0.89
SND1-215ENST00000492772 TRAV20A0A0B4J274 112 aa9.48□□□□□ -0.89
SND1-215ENST00000492772 CDHR4A6H8M9 788 aa9.48□□□□□ -0.89
SND1-215ENST00000492772 TMEM229AB2RXF0 380 aa9.48□□□□□ -0.89
SND1-215ENST00000492772 KCNAB3O43448 404 aa9.48□□□□□ -0.89
SND1-215ENST00000492772 AKAP8O43823 692 aaKnown RBP9.48□□□□□ -0.89
SND1-215ENST00000492772 AHSA1O95433 338 aa9.48□□□□□ -0.89
SND1-215ENST00000492772 PNPP00491 289 aa9.48□□□□□ -0.89
SND1-215ENST00000492772 GAAP10253 952 aa9.48□□□□□ -0.89
SND1-215ENST00000492772 NR2F1P10589 423 aa9.48□□□□□ -0.89
SND1-215ENST00000492772 CREB1P16220 341 aa9.48□□□□□ -0.89
SND1-215ENST00000492772 ZNF43P17038 809 aa9.48□□□□□ -0.89
SND1-215ENST00000492772 EPHA1P21709 976 aa9.48□□□□□ -0.89
SND1-215ENST00000492772 NR4A1P22736 598 aa9.48□□□□□ -0.89
SND1-215ENST00000492772 GTF2E2P29084 291 aaKnown RBP9.48□□□□□ -0.89
SND1-215ENST00000492772 CAPZA2P47755 286 aa9.48□□□□□ -0.89
SND1-215ENST00000492772 CLDN17P56750 224 aa9.48□□□□□ -0.89
SND1-215ENST00000492772 RPS23P62266 143 aaKnown RBP9.48□□□□□ -0.89
SND1-215ENST00000492772 BNIP2Q12982 314 aa9.48□□□□□ -0.89
SND1-215ENST00000492772 ELFN2Q5R3F8 820 aa9.48□□□□□ -0.89
SND1-215ENST00000492772 PEG10Q86TG7 708 aaKnown RBP9.48□□□□□ -0.89
SND1-215ENST00000492772 MDP1Q86V88 176 aa9.48□□□□□ -0.89
SND1-215ENST00000492772 GPR137CQ8N3F9 429 aa9.48□□□□□ -0.89
SND1-215ENST00000492772 CADM2Q8N3J6 435 aa9.48□□□□□ -0.89
SND1-215ENST00000492772 MFSD8Q8NHS3 518 aa9.48□□□□□ -0.89
SND1-215ENST00000492772 STK35Q8TDR2 534 aa9.48□□□□□ -0.89
SND1-215ENST00000492772 RDH5Q92781 318 aa9.48□□□□□ -0.89
SND1-215ENST00000492772 LRRC37BQ96QE4 947 aa9.48□□□□□ -0.89
SND1-215ENST00000492772 RHOXF2Q9BQY4 288 aa9.48□□□□□ -0.89
SND1-215ENST00000492772 ZNF416Q9BWM5 594 aa9.48□□□□□ -0.89
SND1-215ENST00000492772 MRPL37Q9BZE1 423 aaKnown RBP9.48□□□□□ -0.89
SND1-215ENST00000492772 RACGAP1Q9H0H5 632 aa9.48□□□□□ -0.89
SND1-215ENST00000492772 NARFLQ9H6Q4 476 aa9.48□□□□□ -0.89
SND1-215ENST00000492772 LPAR2Q9HBW0 351 aa9.48□□□□□ -0.89
SND1-215ENST00000492772 GPR35Q9HC97 309 aa9.48□□□□□ -0.89
SND1-215ENST00000492772 SLC17A7Q9P2U7 560 aa9.48□□□□□ -0.89
SND1-215ENST00000492772 REV1Q9UBZ9 1251 aa9.48□□□□□ -0.89
SND1-215ENST00000492772 BTNL2Q9UIR0 455 aa9.48□□□□□ -0.89
SND1-215ENST00000492772 ZNF503-AS2A6NEH8 195 aa9.47□□□□□ -0.89
SND1-215ENST00000492772 FTCDNL1E5RQL4 147 aa9.47□□□□□ -0.89
SND1-215ENST00000492772 E9PBE3 544 aa9.47□□□□□ -0.89
SND1-215ENST00000492772 NPIPB7O75200 414 aa9.47□□□□□ -0.89
SND1-215ENST00000492772 RGS9O75916 674 aaPredicted RBP9.47□□□□□ -0.89
SND1-215ENST00000492772 ZNF432O94892 652 aa9.47□□□□□ -0.89
SND1-215ENST00000492772 GSNP06396 782 aa9.47□□□□□ -0.89
SND1-215ENST00000492772 GKN3PP0CG01 181 aa9.47□□□□□ -0.89
SND1-215ENST00000492772 PNMTP11086 282 aa9.47□□□□□ -0.89
SND1-215ENST00000492772 NCF2P19878 526 aaPredicted RBP9.47□□□□□ -0.89
SND1-215ENST00000492772 TMEM33P57088 247 aa9.47□□□□□ -0.89
SND1-215ENST00000492772 MRPS11P82912 194 aaKnown RBP9.47□□□□□ -0.89
SND1-215ENST00000492772 LRRC74AQ0VAA2 488 aa9.47□□□□□ -0.89
SND1-215ENST00000492772 PDCD2Q16342 344 aaPredicted RBP9.47□□□□□ -0.89
SND1-215ENST00000492772 CEACAM16Q2WEN9 425 aa9.47□□□□□ -0.89
SND1-215ENST00000492772 SPANXN4Q5MJ08 99 aa9.47□□□□□ -0.89
SND1-215ENST00000492772 PRR31Q5SQ13 230 aa9.47□□□□□ -0.89
SND1-215ENST00000492772 RNF220Q5VTB9 566 aa9.47□□□□□ -0.89
SND1-215ENST00000492772 THSD4Q6ZMP0 1018 aa9.47□□□□□ -0.89
SND1-215ENST00000492772 ZNF836Q6ZNA1 936 aa9.47□□□□□ -0.89
SND1-215ENST00000492772 RIBC1Q8N443 379 aaPredicted RBP9.47□□□□□ -0.89
SND1-215ENST00000492772 EIF1ADQ8N9N8 165 aaKnown RBP9.47□□□□□ -0.89
SND1-215ENST00000492772 PIK3C3Q8NEB9 887 aa9.47□□□□□ -0.89
SND1-215ENST00000492772 TCP10LQ8TDR4 215 aa9.47□□□□□ -0.89
SND1-215ENST00000492772 PANX1Q96RD7 426 aa9.47□□□□□ -0.89
SND1-215ENST00000492772 SUCNR1Q9BXA5 334 aa9.47□□□□□ -0.89
SND1-215ENST00000492772 AKTIPQ9H8T0 292 aa9.47□□□□□ -0.89
SND1-215ENST00000492772 RLIMQ9NVW2 624 aa9.47□□□□□ -0.89
SND1-215ENST00000492772 CALML5Q9NZT1 146 aa9.47□□□□□ -0.89
SND1-215ENST00000492772 NOX1Q9Y5S8 564 aa9.47□□□□□ -0.89
SND1-215ENST00000492772 DSPPQ9NZW4 1301 aa9.47□□□□□ -0.89
SND1-215ENST00000492772 CCDC154A6NI56 674 aa9.46□□□□□ -0.9
SND1-215ENST00000492772 ZNF99A8MXY4 864 aaPredicted RBP9.46□□□□□ -0.9
SND1-215ENST00000492772 FZD7O75084 574 aa9.46□□□□□ -0.9
SND1-215ENST00000492772 HPXP02790 462 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms