RNA–Protein interactions for RNA: ENST00000492539.5

NELFE-212, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-212ENST00000492539 RETREG3Q86VR2 466 aa17.35■□□□□ 0.37
NELFE-212ENST00000492539 OR9K2Q8NGE7 335 aa17.35■□□□□ 0.37
NELFE-212ENST00000492539 FBXO17Q96EF6 278 aa17.35■□□□□ 0.37
NELFE-212ENST00000492539 RAD21L1Q9H4I0 556 aa17.35■□□□□ 0.37
NELFE-212ENST00000492539 MTHFD2LQ9H903 347 aaPredicted RBP17.35■□□□□ 0.37
NELFE-212ENST00000492539 FKBP7Q9Y680 259 aa17.35■□□□□ 0.37
NELFE-212ENST00000492539 IGHV1-18A0A0C4DH31 117 aa17.34■□□□□ 0.37
NELFE-212ENST00000492539 CLIC1O00299 241 aa17.34■□□□□ 0.37
NELFE-212ENST00000492539 AKR7A3O95154 331 aa17.34■□□□□ 0.37
NELFE-212ENST00000492539 DBIP07108 87 aaKnown RBP17.34■□□□□ 0.37
NELFE-212ENST00000492539 IL7RP16871 459 aa17.34■□□□□ 0.37
NELFE-212ENST00000492539 PPIBP23284 216 aaKnown RBP17.34■□□□□ 0.37
NELFE-212ENST00000492539 CRATP43155 626 aa17.34■□□□□ 0.37
NELFE-212ENST00000492539 NR4A2P43354 598 aa17.34■□□□□ 0.37
NELFE-212ENST00000492539 P2RY4P51582 365 aa17.34■□□□□ 0.37
NELFE-212ENST00000492539 GNA13Q14344 377 aa17.34■□□□□ 0.37
NELFE-212ENST00000492539 OR7A5Q15622 319 aa17.34■□□□□ 0.37
NELFE-212ENST00000492539 MAPK11Q15759 364 aa17.34■□□□□ 0.37
NELFE-212ENST00000492539 DLEU7Q6UYE1 221 aa17.34■□□□□ 0.37
NELFE-212ENST00000492539 DHDDSQ86SQ9 333 aa17.34■□□□□ 0.37
NELFE-212ENST00000492539 PIMREGQ9BSJ6 248 aa17.34■□□□□ 0.37
NELFE-212ENST00000492539 PRR14Q9BWN1 585 aa17.34■□□□□ 0.37
NELFE-212ENST00000492539 THUMPD1Q9NXG2 353 aaKnown RBP17.34■□□□□ 0.37
NELFE-212ENST00000492539 VAPAQ9P0L0 249 aa17.34■□□□□ 0.37
NELFE-212ENST00000492539 PRDM4Q9UKN5 801 aa17.34■□□□□ 0.37
NELFE-212ENST00000492539 KCNS2Q9ULS6 477 aa17.34■□□□□ 0.37
NELFE-212ENST00000492539 CAPN7Q9Y6W3 813 aa17.34■□□□□ 0.37
NELFE-212ENST00000492539 SLC35F4A4IF30 521 aa17.33■□□□□ 0.36
NELFE-212ENST00000492539 BBIP1A8MTZ0 92 aa17.33■□□□□ 0.36
NELFE-212ENST00000492539 DSTNP60981 165 aa17.33■□□□□ 0.36
NELFE-212ENST00000492539 SNRPD2P62316 118 aaKnown RBP17.33■□□□□ 0.36
NELFE-212ENST00000492539 FADDQ13158 208 aa17.33■□□□□ 0.36
NELFE-212ENST00000492539 GGTLC2Q14390 218 aa17.33■□□□□ 0.36
NELFE-212ENST00000492539 RGNQ15493 299 aa17.33■□□□□ 0.36
NELFE-212ENST00000492539 TBRG1Q3YBR2 411 aa17.33■□□□□ 0.36
NELFE-212ENST00000492539 COQ5Q5HYK3 327 aa17.33■□□□□ 0.36
NELFE-212ENST00000492539 FAM166AQ6J272 317 aa17.33■□□□□ 0.36
NELFE-212ENST00000492539 ABHD12BQ7Z5M8 362 aaPredicted RBP17.33■□□□□ 0.36
NELFE-212ENST00000492539 ZNF440Q8IYI8 595 aa17.33■□□□□ 0.36
NELFE-212ENST00000492539 OR1K1Q8NGR3 316 aa17.33■□□□□ 0.36
NELFE-212ENST00000492539 SLC38A2Q96QD8 506 aa17.33■□□□□ 0.36
NELFE-212ENST00000492539 MYOZ1Q9NP98 299 aaPredicted RBP17.33■□□□□ 0.36
NELFE-212ENST00000492539 ARMCX1Q9P291 453 aa17.33■□□□□ 0.36
NELFE-212ENST00000492539 NBEAL1Q6ZS30 2694 aa17.32■□□□□ 0.36
NELFE-212ENST00000492539 DSPPQ9NZW4 1301 aa17.32■□□□□ 0.36
NELFE-212ENST00000492539 CDHR4A6H8M9 788 aa17.32■□□□□ 0.36
NELFE-212ENST00000492539 FBP2O00757 339 aa17.32■□□□□ 0.36
NELFE-212ENST00000492539 BMP2P12643 396 aa17.32■□□□□ 0.36
NELFE-212ENST00000492539 ETFAP13804 333 aa17.32■□□□□ 0.36
NELFE-212ENST00000492539 SRD5A1P18405 259 aa17.32■□□□□ 0.36
NELFE-212ENST00000492539 CDH2P19022 906 aaPredicted RBP17.32■□□□□ 0.36
NELFE-212ENST00000492539 PAX7P23759 505 aa17.32■□□□□ 0.36
NELFE-212ENST00000492539 CXCR1P25024 350 aa17.32■□□□□ 0.36
NELFE-212ENST00000492539 ACAA2P42765 397 aaKnown RBP17.32■□□□□ 0.36
NELFE-212ENST00000492539 PIGWQ7Z7B1 504 aa17.32■□□□□ 0.36
NELFE-212ENST00000492539 GPAT4Q86UL3 456 aa17.32■□□□□ 0.36
NELFE-212ENST00000492539 MSI2Q96DH6 328 aaKnown RBP17.32■□□□□ 0.36
NELFE-212ENST00000492539 KATNB1Q9BVA0 655 aa17.32■□□□□ 0.36
NELFE-212ENST00000492539 CA10Q9NS85 328 aa17.32■□□□□ 0.36
NELFE-212ENST00000492539 RLIMQ9NVW2 624 aa17.32■□□□□ 0.36
NELFE-212ENST00000492539 CRNNQ9UBG3 495 aaPredicted RBP17.32■□□□□ 0.36
NELFE-212ENST00000492539 P2RX2Q9UBL9 471 aa17.32■□□□□ 0.36
NELFE-212ENST00000492539 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.32■□□□□ 0.36
NELFE-212ENST00000492539 CORO2BQ9UQ03 480 aa17.32■□□□□ 0.36
NELFE-212ENST00000492539 IGHV4-61A0A0C4DH41 118 aa17.31■□□□□ 0.36
NELFE-212ENST00000492539 LOC390937A0A1W2PQ73 354 aa17.31■□□□□ 0.36
NELFE-212ENST00000492539 FRS3O43559 492 aa17.31■□□□□ 0.36
NELFE-212ENST00000492539 PDE5AO76074 875 aa17.31■□□□□ 0.36
NELFE-212ENST00000492539 NR2F1P10589 423 aa17.31■□□□□ 0.36
NELFE-212ENST00000492539 SELENOPP49908 381 aa17.31■□□□□ 0.36
NELFE-212ENST00000492539 NFYCQ13952 458 aa17.31■□□□□ 0.36
NELFE-212ENST00000492539 C3orf36Q3SXR2 165 aa17.31■□□□□ 0.36
NELFE-212ENST00000492539 RUNDC3AQ59EK9 446 aa17.31■□□□□ 0.36
NELFE-212ENST00000492539 FAM120AOSQ5T036 256 aa17.31■□□□□ 0.36
NELFE-212ENST00000492539 ZNF836Q6ZNA1 936 aa17.31■□□□□ 0.36
NELFE-212ENST00000492539 CREB3L2Q70SY1 520 aa17.31■□□□□ 0.36
NELFE-212ENST00000492539 SNX32Q86XE0 403 aa17.31■□□□□ 0.36
NELFE-212ENST00000492539 PEX5LQ8IYB4 626 aa17.31■□□□□ 0.36
NELFE-212ENST00000492539 CPPED1Q9BRF8 314 aaPredicted RBP17.31■□□□□ 0.36
NELFE-212ENST00000492539 TAPBPLQ9BX59 468 aa17.31■□□□□ 0.36
NELFE-212ENST00000492539 CHODLQ9H9P2 273 aa17.31■□□□□ 0.36
NELFE-212ENST00000492539 ARPC4-TTLL3A0A0A6YYG9 625 aa17.3■□□□□ 0.36
NELFE-212ENST00000492539 LOC100289279A0A1B0GTE1 492 aa17.3■□□□□ 0.36
NELFE-212ENST00000492539 A8MVM7 634 aa17.3■□□□□ 0.36
NELFE-212ENST00000492539 B9A039 149 aa17.3■□□□□ 0.36
NELFE-212ENST00000492539 ZNF587BE7ETH6 402 aa17.3■□□□□ 0.36
NELFE-212ENST00000492539 SHOX2O60902 331 aaPredicted RBP17.3■□□□□ 0.36
NELFE-212ENST00000492539 NPIPB7O75200 414 aa17.3■□□□□ 0.36
NELFE-212ENST00000492539 VAMP5O95183 116 aa17.3■□□□□ 0.36
NELFE-212ENST00000492539 LGI1O95970 557 aa17.3■□□□□ 0.36
NELFE-212ENST00000492539 TFPTP0C1Z6 253 aa17.3■□□□□ 0.36
NELFE-212ENST00000492539 GKN3PP0CG01 181 aa17.3■□□□□ 0.36
NELFE-212ENST00000492539 APEHP13798 732 aaKnown RBP17.3■□□□□ 0.36
NELFE-212ENST00000492539 GPX2P18283 190 aa17.3■□□□□ 0.36
NELFE-212ENST00000492539 SERPINF1P36955 418 aa17.3■□□□□ 0.36
NELFE-212ENST00000492539 LGALS3BPQ08380 585 aa17.3■□□□□ 0.36
NELFE-212ENST00000492539 BNIP2Q12982 314 aa17.3■□□□□ 0.36
NELFE-212ENST00000492539 CYLC2Q14093 348 aaPredicted RBP17.3■□□□□ 0.36
NELFE-212ENST00000492539 EFNB3Q15768 340 aa17.3■□□□□ 0.36
NELFE-212ENST00000492539 TRMT5Q32P41 509 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms