RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 C10orf105Q8TEF2 133 aa7.3□□□□□ -1.24
SMARCB1-207ENST00000491967 DNAJA4Q8WW22 397 aaPredicted RBP7.3□□□□□ -1.24
SMARCB1-207ENST00000491967 PROX1Q92786 737 aa7.3□□□□□ -1.24
SMARCB1-207ENST00000491967 SLC38A4Q969I6 547 aa7.3□□□□□ -1.24
SMARCB1-207ENST00000491967 TAAR8Q969N4 342 aa7.3□□□□□ -1.24
SMARCB1-207ENST00000491967 OXGR1Q96P68 337 aa7.3□□□□□ -1.24
SMARCB1-207ENST00000491967 TNFRSF13CQ96RJ3 184 aa7.3□□□□□ -1.24
SMARCB1-207ENST00000491967 RHNO1Q9BSD3 238 aa7.3□□□□□ -1.24
SMARCB1-207ENST00000491967 KATNB1Q9BVA0 655 aa7.3□□□□□ -1.24
SMARCB1-207ENST00000491967 TAPBPLQ9BX59 468 aa7.3□□□□□ -1.24
SMARCB1-207ENST00000491967 C1QTNF6Q9BXI9 259 aa7.3□□□□□ -1.24
SMARCB1-207ENST00000491967 IKZF5Q9H5V7 419 aa7.3□□□□□ -1.24
SMARCB1-207ENST00000491967 TMEM38AQ9H6F2 299 aa7.3□□□□□ -1.24
SMARCB1-207ENST00000491967 MOV10Q9HCE1 1003 aaKnown RBP7.3□□□□□ -1.24
SMARCB1-207ENST00000491967 SLCO1B3Q9NPD5 702 aa7.3□□□□□ -1.24
SMARCB1-207ENST00000491967 TCF7L2Q9NQB0 619 aa7.3□□□□□ -1.24
SMARCB1-207ENST00000491967 TMEM160Q9NX00 188 aa7.3□□□□□ -1.24
SMARCB1-207ENST00000491967 ADPRHL2Q9NX46 363 aa7.3□□□□□ -1.24
SMARCB1-207ENST00000491967 VAPAQ9P0L0 249 aa7.3□□□□□ -1.24
SMARCB1-207ENST00000491967 A0A087WUJ7 227 aa7.29□□□□□ -1.24
SMARCB1-207ENST00000491967 IGHV1-18A0A0C4DH31 117 aa7.29□□□□□ -1.24
SMARCB1-207ENST00000491967 A0A1B0GWA3 101 aa7.29□□□□□ -1.24
SMARCB1-207ENST00000491967 TMEM247A6NEH6 219 aa7.29□□□□□ -1.24
SMARCB1-207ENST00000491967 ZNF587BE7ETH6 402 aa7.29□□□□□ -1.24
SMARCB1-207ENST00000491967 ATP6V1G2-DDX39BF2Z307 99 aa7.29□□□□□ -1.24
SMARCB1-207ENST00000491967 MS4A18H0YCH9 400 aa7.29□□□□□ -1.24
SMARCB1-207ENST00000491967 TRAF3IP2O43734 574 aaPredicted RBP7.29□□□□□ -1.24
SMARCB1-207ENST00000491967 SSX4O60224 188 aa7.29□□□□□ -1.24
SMARCB1-207ENST00000491967 GPRIN2O60269 458 aa7.29□□□□□ -1.24
SMARCB1-207ENST00000491967 TPST1O60507 370 aa7.29□□□□□ -1.24
SMARCB1-207ENST00000491967 UPK3AO75631 287 aa7.29□□□□□ -1.24
SMARCB1-207ENST00000491967 PDE5AO76074 875 aa7.29□□□□□ -1.24
SMARCB1-207ENST00000491967 LGI1O95970 557 aa7.29□□□□□ -1.24
SMARCB1-207ENST00000491967 BMP4P12644 408 aa7.29□□□□□ -1.24
SMARCB1-207ENST00000491967 SLC25A16P16260 332 aa7.29□□□□□ -1.24
SMARCB1-207ENST00000491967 PPIBP23284 216 aaKnown RBP7.29□□□□□ -1.24
SMARCB1-207ENST00000491967 NUDT6P53370 316 aa7.29□□□□□ -1.24
SMARCB1-207ENST00000491967 SH3BGRP55822 239 aaPredicted RBP7.29□□□□□ -1.24
SMARCB1-207ENST00000491967 PCBP3P57721 371 aaKnown RBP7.29□□□□□ -1.24
SMARCB1-207ENST00000491967 HOXC5Q00444 222 aa7.29□□□□□ -1.24
SMARCB1-207ENST00000491967 CDK6Q00534 326 aa7.29□□□□□ -1.24
SMARCB1-207ENST00000491967 CHRNB3Q05901 458 aa7.29□□□□□ -1.24
SMARCB1-207ENST00000491967 RAB35Q15286 201 aa7.29□□□□□ -1.24
SMARCB1-207ENST00000491967 EFNB3Q15768 340 aa7.29□□□□□ -1.24
SMARCB1-207ENST00000491967 TMEM249Q2WGJ8 235 aa7.29□□□□□ -1.24
SMARCB1-207ENST00000491967 MS4A18Q3C1V0 323 aa7.29□□□□□ -1.24
SMARCB1-207ENST00000491967 PAGE3Q5JUK9 113 aa7.29□□□□□ -1.24
SMARCB1-207ENST00000491967 C6orf10Q5SRN2 563 aa7.29□□□□□ -1.24
SMARCB1-207ENST00000491967 FAM69AQ5T7M9 428 aa7.29□□□□□ -1.24
SMARCB1-207ENST00000491967 FAM91A1Q658Y4 838 aa7.29□□□□□ -1.24
SMARCB1-207ENST00000491967 REEP3Q6NUK4 255 aa7.29□□□□□ -1.24
SMARCB1-207ENST00000491967 ULK3Q6PHR2 472 aa7.29□□□□□ -1.24
SMARCB1-207ENST00000491967 H1FNTQ75WM6 255 aaPredicted RBP7.29□□□□□ -1.24
SMARCB1-207ENST00000491967 GPAT4Q86UL3 456 aa7.29□□□□□ -1.24
SMARCB1-207ENST00000491967 TMEM123Q8N131 208 aa7.29□□□□□ -1.24
SMARCB1-207ENST00000491967 SPDL1Q96EA4 605 aa7.29□□□□□ -1.24
SMARCB1-207ENST00000491967 LRR1Q96L50 414 aa7.29□□□□□ -1.24
SMARCB1-207ENST00000491967 ZNF75AQ96N20 296 aa7.29□□□□□ -1.24
SMARCB1-207ENST00000491967 SLC38A2Q96QD8 506 aa7.29□□□□□ -1.24
SMARCB1-207ENST00000491967 EBF4Q9BQW3 602 aa7.29□□□□□ -1.24
SMARCB1-207ENST00000491967 ZNF385DQ9H6B1 395 aa7.29□□□□□ -1.24
SMARCB1-207ENST00000491967 EVA1AQ9H8M9 152 aa7.29□□□□□ -1.24
SMARCB1-207ENST00000491967 SEC14L4Q9UDX3 406 aa7.29□□□□□ -1.24
SMARCB1-207ENST00000491967 MOKQ9UQ07 419 aa7.29□□□□□ -1.24
SMARCB1-207ENST00000491967 TRAV36DV7A0A075B6V5 113 aa7.28□□□□□ -1.24
SMARCB1-207ENST00000491967 A0A0B4J2E0 115 aa7.28□□□□□ -1.24
SMARCB1-207ENST00000491967 A0A1B0GX12 115 aa7.28□□□□□ -1.24
SMARCB1-207ENST00000491967 AIM2O14862 343 aa7.28□□□□□ -1.24
SMARCB1-207ENST00000491967 FMO6PO60774 539 aa7.28□□□□□ -1.24
SMARCB1-207ENST00000491967 MFN2O95140 757 aa7.28□□□□□ -1.24
SMARCB1-207ENST00000491967 AHSA1O95433 338 aa7.28□□□□□ -1.24
SMARCB1-207ENST00000491967 CSF3P09919 207 aa7.28□□□□□ -1.24
SMARCB1-207ENST00000491967 CBR1P16152 277 aa7.28□□□□□ -1.24
SMARCB1-207ENST00000491967 NCF2P19878 526 aaPredicted RBP7.28□□□□□ -1.24
SMARCB1-207ENST00000491967 THBS2P35442 1172 aa7.28□□□□□ -1.24
SMARCB1-207ENST00000491967 SERPINF1P36955 418 aa7.28□□□□□ -1.24
SMARCB1-207ENST00000491967 RPS5P46782 204 aaKnown RBP7.28□□□□□ -1.24
SMARCB1-207ENST00000491967 ROR2Q01974 943 aaKnown RBP7.28□□□□□ -1.24
SMARCB1-207ENST00000491967 NAAAQ02083 359 aa7.28□□□□□ -1.24
SMARCB1-207ENST00000491967 MFSD13AQ14CX5 517 aa7.28□□□□□ -1.24
SMARCB1-207ENST00000491967 RUNDC3AQ59EK9 446 aa7.28□□□□□ -1.24
SMARCB1-207ENST00000491967 GCNT6Q5T4J0 391 aa7.28□□□□□ -1.24
SMARCB1-207ENST00000491967 SWT1Q5T5J6 900 aaKnown RBP7.28□□□□□ -1.24
SMARCB1-207ENST00000491967 CLEC2AQ6UVW9 174 aa7.28□□□□□ -1.24
SMARCB1-207ENST00000491967 CXXC5Q7LFL8 322 aaKnown RBP7.28□□□□□ -1.24
SMARCB1-207ENST00000491967 CCDC36Q8IYA8 594 aa7.28□□□□□ -1.24
SMARCB1-207ENST00000491967 KDM8Q8N371 416 aa7.28□□□□□ -1.24
SMARCB1-207ENST00000491967 DPP10Q8N608 796 aa7.28□□□□□ -1.24
SMARCB1-207ENST00000491967 ZNF525Q8N782 197 aa7.28□□□□□ -1.24
SMARCB1-207ENST00000491967 SCAIQ8N9R8 606 aa7.28□□□□□ -1.24
SMARCB1-207ENST00000491967 NUP37Q8NFH4 326 aa7.28□□□□□ -1.24
SMARCB1-207ENST00000491967 BHLHE22Q8NFJ8 381 aaPredicted RBP7.28□□□□□ -1.24
SMARCB1-207ENST00000491967 NFKBIDQ8NI38 313 aa7.28□□□□□ -1.24
SMARCB1-207ENST00000491967 TSPEARQ8WU66 669 aa7.28□□□□□ -1.24
SMARCB1-207ENST00000491967 FAM168AQ92567 244 aa7.28□□□□□ -1.24
SMARCB1-207ENST00000491967 ZNF837Q96EG3 531 aaPredicted RBP7.28□□□□□ -1.24
SMARCB1-207ENST00000491967 ATP6V1G3Q96LB4 118 aa7.28□□□□□ -1.24
SMARCB1-207ENST00000491967 OR2M2Q96R28 347 aa7.28□□□□□ -1.24
SMARCB1-207ENST00000491967 WFDC6Q9BQY6 131 aa7.28□□□□□ -1.24
SMARCB1-207ENST00000491967 TMEM43Q9BTV4 400 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms