RNA–Protein interactions for RNA: ENST00000491791.1

USP4-214, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 821 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-214ENST00000491791 ALG10Q5BKT4 473 aa9.76□□□□□ -0.85
USP4-214ENST00000491791 PRAMEF17Q5VTA0 474 aa9.76□□□□□ -0.85
USP4-214ENST00000491791 SLC6A19Q695T7 634 aa9.76□□□□□ -0.85
USP4-214ENST00000491791 TMEM205Q6UW68 189 aa9.76□□□□□ -0.85
USP4-214ENST00000491791 GDPD3Q7L5L3 318 aa9.76□□□□□ -0.85
USP4-214ENST00000491791 TMPRSS9Q7Z410 1059 aa9.76□□□□□ -0.85
USP4-214ENST00000491791 ANKRD37Q7Z713 158 aa9.76□□□□□ -0.85
USP4-214ENST00000491791 SNX29P2Q8IUI4 249 aa9.76□□□□□ -0.85
USP4-214ENST00000491791 CADM3Q8N126 398 aa9.76□□□□□ -0.85
USP4-214ENST00000491791 POC5Q8NA72 575 aa9.76□□□□□ -0.85
USP4-214ENST00000491791 SYT14Q8NB59 555 aa9.76□□□□□ -0.85
USP4-214ENST00000491791 FAM98AQ8NCA5 519 aaKnown RBP9.76□□□□□ -0.85
USP4-214ENST00000491791 APCDD1LQ8NCL9 501 aa9.76□□□□□ -0.85
USP4-214ENST00000491791 FAM83FQ8NEG4 500 aaPredicted RBP9.76□□□□□ -0.85
USP4-214ENST00000491791 OR4K13Q8NH42 304 aa9.76□□□□□ -0.85
USP4-214ENST00000491791 ABHD4Q8TB40 342 aa9.76□□□□□ -0.85
USP4-214ENST00000491791 GPR119Q8TDV5 335 aa9.76□□□□□ -0.85
USP4-214ENST00000491791 TTC9Q92623 222 aa9.76□□□□□ -0.85
USP4-214ENST00000491791 OMA1Q96E52 524 aa9.76□□□□□ -0.85
USP4-214ENST00000491791 TXNDC15Q96J42 360 aa9.76□□□□□ -0.85
USP4-214ENST00000491791 DCLRE1CQ96SD1 692 aaKnown RBP9.76□□□□□ -0.85
USP4-214ENST00000491791 GTPBP2Q9BX10 602 aaKnown RBP9.76□□□□□ -0.85
USP4-214ENST00000491791 HDHD5Q9BXW7 423 aa9.76□□□□□ -0.85
USP4-214ENST00000491791 RNF32Q9H0A6 362 aa9.76□□□□□ -0.85
USP4-214ENST00000491791 PPP1R3EQ9H7J1 279 aa9.76□□□□□ -0.85
USP4-214ENST00000491791 ABCB9Q9NP78 766 aa9.76□□□□□ -0.85
USP4-214ENST00000491791 NPAP1Q9NZP6 1156 aa9.76□□□□□ -0.85
USP4-214ENST00000491791 FBXL4Q9UKA2 621 aa9.76□□□□□ -0.85
USP4-214ENST00000491791 ADAM30Q9UKF2 790 aa9.76□□□□□ -0.85
USP4-214ENST00000491791 MKL2Q9ULH7 1088 aa9.76□□□□□ -0.85
USP4-214ENST00000491791 GRIP1Q9Y3R0 1128 aa9.76□□□□□ -0.85
USP4-214ENST00000491791 HEATR5AQ86XA9 2040 aa9.76□□□□□ -0.85
USP4-214ENST00000491791 GON4LQ3T8J9 2241 aa9.76□□□□□ -0.85
USP4-214ENST00000491791 SPTBP11277 2137 aa9.76□□□□□ -0.85
USP4-214ENST00000491791 ASCC3Q8N3C0 2202 aaKnown RBP9.75□□□□□ -0.85
USP4-214ENST00000491791 ARID1BQ8NFD5 2236 aaPredicted RBP9.75□□□□□ -0.85
USP4-214ENST00000491791 ZFYVE26Q68DK2 2539 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 CACNA1EQ15878 2313 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 KNL1Q8NG31 2342 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 SHISA3A0PJX4 238 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 FABP12A6NFH5 140 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 NPIPB13A6NJU9 1138 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 A8MUA0 341 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 NPIPB4C9JG80 1138 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 CASKO14936 926 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 ZZEF1O43149 2961 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 SIGLEC6O43699 453 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 ALOX12BO75342 701 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 IGHMP01871 453 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 HNRNPCP07910 306 aaKnown RBP eCLIP9.75□□□□□ -0.85
USP4-214ENST00000491791 SYPP08247 313 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 CLUP10909 449 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 FGF5P12034 268 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 PTNP21246 168 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 GTF2E2P29084 291 aaKnown RBP9.75□□□□□ -0.85
USP4-214ENST00000491791 EVI2BP34910 448 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 RPL4P36578 427 aaKnown RBP9.75□□□□□ -0.85
USP4-214ENST00000491791 POLR2HP52434 150 aaKnown RBP9.75□□□□□ -0.85
USP4-214ENST00000491791 OR12D2P58182 307 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 RPS7P62081 194 aaKnown RBP9.75□□□□□ -0.85
USP4-214ENST00000491791 SIRPAP78324 504 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 DCDP81605 110 aaKnown RBP9.75□□□□□ -0.85
USP4-214ENST00000491791 DNASE1L3Q13609 305 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 IL11RAQ14626 422 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 CDK5R1Q15078 307 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 SNAP47Q5SQN1 464 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 HBMQ6B0K9 141 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 GUSBP11Q6P575 273 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 B3GLCTQ6Y288 498 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 GRINAQ7Z429 371 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 SLC35F2Q8IXU6 374 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 ZFP41Q8N8Y5 198 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 CYB561A3Q8NBI2 242 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 SDR9C7Q8NEX9 313 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 MOSPD2Q8NHP6 518 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 ZCCHC14Q8WYQ9 949 aaKnown RBP9.75□□□□□ -0.85
USP4-214ENST00000491791 ST8SIA1Q92185 356 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 ZNF524Q96C55 264 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 SMIM19Q96E16 107 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 PELI1Q96FA3 418 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 C4orf36Q96KX1 117 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 CMTM3Q96MX0 182 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 MOGAT1Q96PD6 335 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 LPAR4Q99677 370 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 TMED9Q9BVK6 235 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 RTN4RQ9BZR6 473 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 TPK1Q9H3S4 243 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 WDR54Q9H977 334 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 RHBDL2Q9NX52 303 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 TOR4AQ9NXH8 423 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 CTSFQ9UBX1 484 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 RARRES3Q9UL19 164 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 TBC1D24Q9ULP9 559 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 WASF3Q9UPY6 502 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 ADAM18Q9Y3Q7 739 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 B3GALT1Q9Y5Z6 326 aa9.75□□□□□ -0.85
USP4-214ENST00000491791 A8MU76 341 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 IDSB3KWA1 339 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 LRRN3E7EW58 273 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 E9PI62 339 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms