RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 G6PC2Q9NQR9 355 aa11.37□□□□□ -0.59
USF1-206ENST00000491629 MYEF2Q9P2K5 600 aaKnown RBP11.37□□□□□ -0.59
USF1-206ENST00000491629 SEC14L4Q9UDX3 406 aa11.37□□□□□ -0.59
USF1-206ENST00000491629 FBXO9Q9UK97 447 aaPredicted RBP11.37□□□□□ -0.59
USF1-206ENST00000491629 PCDHB10Q9UN67 800 aa11.37□□□□□ -0.59
USF1-206ENST00000491629 LOC105371242A0A075B767 164 aa11.36□□□□□ -0.59
USF1-206ENST00000491629 PRSS51A0A1B0GVH4 220 aa11.36□□□□□ -0.59
USF1-206ENST00000491629 CFAP73A6NFT4 308 aa11.36□□□□□ -0.59
USF1-206ENST00000491629 TMPRSS2O15393 492 aa11.36□□□□□ -0.59
USF1-206ENST00000491629 SEC14L2O76054 403 aa11.36□□□□□ -0.59
USF1-206ENST00000491629 AGR2O95994 175 aa11.36□□□□□ -0.59
USF1-206ENST00000491629 MSMBP08118 114 aa11.36□□□□□ -0.59
USF1-206ENST00000491629 GAAP10253 952 aa11.36□□□□□ -0.59
USF1-206ENST00000491629 PRG2P13727 222 aa11.36□□□□□ -0.59
USF1-206ENST00000491629 HOXB1P14653 301 aaPredicted RBP11.36□□□□□ -0.59
USF1-206ENST00000491629 TCN1P20061 433 aaPredicted RBP11.36□□□□□ -0.59
USF1-206ENST00000491629 PCMT1P22061 227 aa11.36□□□□□ -0.59
USF1-206ENST00000491629 NR4A1P22736 598 aa11.36□□□□□ -0.59
USF1-206ENST00000491629 PAX7P23759 505 aa11.36□□□□□ -0.59
USF1-206ENST00000491629 CXCR1P25024 350 aa11.36□□□□□ -0.59
USF1-206ENST00000491629 DAG1Q14118 895 aa11.36□□□□□ -0.59
USF1-206ENST00000491629 PHYHD1Q5SRE7 291 aa11.36□□□□□ -0.59
USF1-206ENST00000491629 UGT2A3Q6UWM9 527 aa11.36□□□□□ -0.59
USF1-206ENST00000491629 RNF130Q86XS8 419 aa11.36□□□□□ -0.59
USF1-206ENST00000491629 WDFY1Q8IWB7 410 aa11.36□□□□□ -0.59
USF1-206ENST00000491629 CNPY4Q8N129 248 aa11.36□□□□□ -0.59
USF1-206ENST00000491629 ZNF418Q8TF45 676 aaPredicted RBP11.36□□□□□ -0.59
USF1-206ENST00000491629 MS4A3Q96HJ5 214 aa11.36□□□□□ -0.59
USF1-206ENST00000491629 TRNT1Q96Q11 434 aaKnown RBP11.36□□□□□ -0.59
USF1-206ENST00000491629 PTDSS2Q9BVG9 487 aa11.36□□□□□ -0.59
USF1-206ENST00000491629 ZNF275Q9NSD4 429 aaPredicted RBP11.36□□□□□ -0.59
USF1-206ENST00000491629 MKS1Q9NXB0 559 aa11.36□□□□□ -0.59
USF1-206ENST00000491629 B3GNT2Q9NY97 397 aa11.36□□□□□ -0.59
USF1-206ENST00000491629 B3GAT1Q9P2W7 334 aa11.36□□□□□ -0.59
USF1-206ENST00000491629 MID2Q9UJV3 735 aa11.36□□□□□ -0.59
USF1-206ENST00000491629 CHST2Q9Y4C5 530 aa11.36□□□□□ -0.59
USF1-206ENST00000491629 WNK1Q9H4A3 2382 aa11.36□□□□□ -0.59
USF1-206ENST00000491629 SYNGR3O43761 229 aa11.35□□□□□ -0.59
USF1-206ENST00000491629 RP2O75695 350 aa11.35□□□□□ -0.59
USF1-206ENST00000491629 VAMP5O95183 116 aa11.35□□□□□ -0.59
USF1-206ENST00000491629 ERCC1P07992 297 aaPredicted RBP11.35□□□□□ -0.59
USF1-206ENST00000491629 SAGP10523 405 aaPredicted RBP11.35□□□□□ -0.59
USF1-206ENST00000491629 EPHA1P21709 976 aa11.35□□□□□ -0.59
USF1-206ENST00000491629 ALDH3B1P43353 468 aa11.35□□□□□ -0.59
USF1-206ENST00000491629 GPR6P46095 362 aaPredicted RBP11.35□□□□□ -0.59
USF1-206ENST00000491629 CLDN17P56750 224 aa11.35□□□□□ -0.59
USF1-206ENST00000491629 EGR4Q05215 589 aa11.35□□□□□ -0.59
USF1-206ENST00000491629 NPRL3Q12980 569 aa11.35□□□□□ -0.59
USF1-206ENST00000491629 MAD2L1BPQ15013 274 aaPredicted RBP11.35□□□□□ -0.59
USF1-206ENST00000491629 CEACAM16Q2WEN9 425 aa11.35□□□□□ -0.59
USF1-206ENST00000491629 PDLIM3Q53GG5 364 aaPredicted RBP11.35□□□□□ -0.59
USF1-206ENST00000491629 COX20Q5RI15 118 aa11.35□□□□□ -0.59
USF1-206ENST00000491629 C1orf140Q5VVS0 124 aa11.35□□□□□ -0.59
USF1-206ENST00000491629 PRAMEF8Q5VWM4 474 aa11.35□□□□□ -0.59
USF1-206ENST00000491629 PRAMEF7Q5VXH5 474 aa11.35□□□□□ -0.59
USF1-206ENST00000491629 LRRC74BQ6ZQY2 392 aa11.35□□□□□ -0.59
USF1-206ENST00000491629 ZDHHC22Q8N966 263 aa11.35□□□□□ -0.59
USF1-206ENST00000491629 MRPL24Q96A35 216 aaKnown RBP11.35□□□□□ -0.59
USF1-206ENST00000491629 APOPT1Q96IL0 206 aa11.35□□□□□ -0.59
USF1-206ENST00000491629 SLC35A5Q9BS91 424 aa11.35□□□□□ -0.59
USF1-206ENST00000491629 AKTIPQ9H8T0 292 aa11.35□□□□□ -0.59
USF1-206ENST00000491629 CRLF2Q9HC73 371 aa11.35□□□□□ -0.59
USF1-206ENST00000491629 NOP53Q9NZM5 478 aaKnown RBP11.35□□□□□ -0.59
USF1-206ENST00000491629 REV1Q9UBZ9 1251 aa11.35□□□□□ -0.59
USF1-206ENST00000491629 MARCOQ9UEW3 520 aaPredicted RBP11.35□□□□□ -0.59
USF1-206ENST00000491629 USP22Q9UPT9 525 aa11.35□□□□□ -0.59
USF1-206ENST00000491629 CMAHPQ9Y471 501 aa11.35□□□□□ -0.59
USF1-206ENST00000491629 PCDHGB1Q9Y5G3 927 aa11.35□□□□□ -0.59
USF1-206ENST00000491629 TANC2Q9HCD6 1990 aa11.35□□□□□ -0.59
USF1-206ENST00000491629 CDHR4A6H8M9 788 aa11.34□□□□□ -0.59
USF1-206ENST00000491629 A8MVM7 634 aa11.34□□□□□ -0.59
USF1-206ENST00000491629 TRIM77I1YAP6 450 aa11.34□□□□□ -0.59
USF1-206ENST00000491629 FZD7O75084 574 aa11.34□□□□□ -0.59
USF1-206ENST00000491629 PNMTP11086 282 aa11.34□□□□□ -0.59
USF1-206ENST00000491629 ZNF35P13682 527 aa11.34□□□□□ -0.59
USF1-206ENST00000491629 ACHEP22303 614 aa11.34□□□□□ -0.59
USF1-206ENST00000491629 ARR3P36575 388 aa11.34□□□□□ -0.59
USF1-206ENST00000491629 EVX1P49640 407 aa11.34□□□□□ -0.59
USF1-206ENST00000491629 SH3BGRP55822 239 aaPredicted RBP11.34□□□□□ -0.59
USF1-206ENST00000491629 GSTA3Q16772 222 aa11.34□□□□□ -0.59
USF1-206ENST00000491629 SLC9B1Q4ZJI4 515 aa11.34□□□□□ -0.59
USF1-206ENST00000491629 SPANXN4Q5MJ08 99 aa11.34□□□□□ -0.59
USF1-206ENST00000491629 SWT1Q5T5J6 900 aaKnown RBP11.34□□□□□ -0.59
USF1-206ENST00000491629 FAHD2BQ6P2I3 314 aaPredicted RBP11.34□□□□□ -0.59
USF1-206ENST00000491629 ZNF836Q6ZNA1 936 aa11.34□□□□□ -0.59
USF1-206ENST00000491629 VRK2Q86Y07 508 aa11.34□□□□□ -0.59
USF1-206ENST00000491629 IFT20Q8IY31 132 aa11.34□□□□□ -0.59
USF1-206ENST00000491629 MNS1Q8NEH6 495 aa11.34□□□□□ -0.59
USF1-206ENST00000491629 ANKK1Q8NFD2 765 aa11.34□□□□□ -0.59
USF1-206ENST00000491629 FAHD2AQ96GK7 314 aa11.34□□□□□ -0.59
USF1-206ENST00000491629 TEX37Q96LM6 180 aa11.34□□□□□ -0.59
USF1-206ENST00000491629 PPP1R36Q96LQ0 422 aa11.34□□□□□ -0.59
USF1-206ENST00000491629 SLC6A7Q99884 636 aa11.34□□□□□ -0.59
USF1-206ENST00000491629 SYT3Q9BQG1 590 aa11.34□□□□□ -0.59
USF1-206ENST00000491629 RBM4Q9BWF3 364 aaKnown RBP11.34□□□□□ -0.59
USF1-206ENST00000491629 TMPRSS13Q9BYE2 586 aa11.34□□□□□ -0.59
USF1-206ENST00000491629 MTHFD2LQ9H903 347 aaPredicted RBP11.34□□□□□ -0.59
USF1-206ENST00000491629 ZNF224Q9NZL3 707 aa11.34□□□□□ -0.59
USF1-206ENST00000491629 RASD1Q9Y272 281 aa11.34□□□□□ -0.59
USF1-206ENST00000491629 M0R233 179 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms