RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 OXGR1Q96P68 337 aa14.55□□□□□ -0.08
PDLIM2-217ENST00000491330 CPPED1Q9BRF8 314 aaPredicted RBP14.55□□□□□ -0.08
PDLIM2-217ENST00000491330 TRAF4Q9BUZ4 470 aaPredicted RBP14.55□□□□□ -0.08
PDLIM2-217ENST00000491330 C1QTNF6Q9BXI9 259 aa14.55□□□□□ -0.08
PDLIM2-217ENST00000491330 AP3M1Q9Y2T2 418 aa14.55□□□□□ -0.08
PDLIM2-217ENST00000491330 MTORP42345 2549 aa14.54□□□□□ -0.08
PDLIM2-217ENST00000491330 A0A1W2PR80 420 aa14.54□□□□□ -0.08
PDLIM2-217ENST00000491330 SHISA9B4DS77 424 aa14.54□□□□□ -0.08
PDLIM2-217ENST00000491330 ENTPD5O75356 428 aa14.54□□□□□ -0.08
PDLIM2-217ENST00000491330 OR6A2O95222 327 aa14.54□□□□□ -0.08
PDLIM2-217ENST00000491330 ITGA5P08648 1049 aa14.54□□□□□ -0.08
PDLIM2-217ENST00000491330 EDNRAP25101 427 aa14.54□□□□□ -0.08
PDLIM2-217ENST00000491330 TRMT5Q32P41 509 aaKnown RBP14.54□□□□□ -0.08
PDLIM2-217ENST00000491330 MMEL1Q495T6 779 aa14.54□□□□□ -0.08
PDLIM2-217ENST00000491330 SWT1Q5T5J6 900 aaKnown RBP14.54□□□□□ -0.08
PDLIM2-217ENST00000491330 CLEC2AQ6UVW9 174 aa14.54□□□□□ -0.08
PDLIM2-217ENST00000491330 C6orf89Q6UWU4 347 aa14.54□□□□□ -0.08
PDLIM2-217ENST00000491330 PATL1Q86TB9 770 aaKnown RBP14.54□□□□□ -0.08
PDLIM2-217ENST00000491330 DTX2Q86UW9 622 aa14.54□□□□□ -0.08
PDLIM2-217ENST00000491330 CCDC36Q8IYA8 594 aa14.54□□□□□ -0.08
PDLIM2-217ENST00000491330 OR8J3Q8NGG0 315 aa14.54□□□□□ -0.08
PDLIM2-217ENST00000491330 OR6S1Q8NH40 331 aa14.54□□□□□ -0.08
PDLIM2-217ENST00000491330 ZNF385AQ96PM9 386 aaKnown RBP14.54□□□□□ -0.08
PDLIM2-217ENST00000491330 SMR3AQ99954 134 aa14.54□□□□□ -0.08
PDLIM2-217ENST00000491330 LINC00470Q9BZP3 86 aa14.54□□□□□ -0.08
PDLIM2-217ENST00000491330 AMBRA1Q9C0C7 1298 aa14.54□□□□□ -0.08
PDLIM2-217ENST00000491330 SLAMF8Q9P0V8 285 aa14.54□□□□□ -0.08
PDLIM2-217ENST00000491330 A0A1B0GWA3 101 aa14.53□□□□□ -0.08
PDLIM2-217ENST00000491330 TMEM229AB2RXF0 380 aa14.53□□□□□ -0.08
PDLIM2-217ENST00000491330 CCDC22O60826 627 aa14.53□□□□□ -0.08
PDLIM2-217ENST00000491330 NPIPB7O75200 414 aa14.53□□□□□ -0.08
PDLIM2-217ENST00000491330 C8BP07358 591 aa14.53□□□□□ -0.08
PDLIM2-217ENST00000491330 AQP1P29972 269 aa14.53□□□□□ -0.08
PDLIM2-217ENST00000491330 APOBEC3AP31941 199 aaPredicted RBP14.53□□□□□ -0.08
PDLIM2-217ENST00000491330 CLDN17P56750 224 aa14.53□□□□□ -0.08
PDLIM2-217ENST00000491330 HOXC5Q00444 222 aa14.53□□□□□ -0.08
PDLIM2-217ENST00000491330 GUCY1A3Q02108 690 aa14.53□□□□□ -0.08
PDLIM2-217ENST00000491330 TNK1Q13470 666 aa14.53□□□□□ -0.08
PDLIM2-217ENST00000491330 PGGHGQ32M88 737 aa14.53□□□□□ -0.08
PDLIM2-217ENST00000491330 ANKRD16Q6P6B7 361 aa14.53□□□□□ -0.08
PDLIM2-217ENST00000491330 UEVLDQ8IX04 471 aa14.53□□□□□ -0.08
PDLIM2-217ENST00000491330 NEUROG1Q92886 237 aa14.53□□□□□ -0.08
PDLIM2-217ENST00000491330 THOC1Q96FV9 657 aaKnown RBP14.53□□□□□ -0.08
PDLIM2-217ENST00000491330 GID8Q9NWU2 228 aa14.53□□□□□ -0.08
PDLIM2-217ENST00000491330 NPAP1Q9NZP6 1156 aa14.53□□□□□ -0.08
PDLIM2-217ENST00000491330 ZNF726A6NNF4 738 aa14.52□□□□□ -0.09
PDLIM2-217ENST00000491330 PDLIM1O00151 329 aa14.52□□□□□ -0.09
PDLIM2-217ENST00000491330 IFNA14P01570 189 aa14.52□□□□□ -0.09
PDLIM2-217ENST00000491330 HIST1H2ABP04908 130 aa14.52□□□□□ -0.09
PDLIM2-217ENST00000491330 ERCC1P07992 297 aaPredicted RBP14.52□□□□□ -0.09
PDLIM2-217ENST00000491330 NTF4P34130 210 aa14.52□□□□□ -0.09
PDLIM2-217ENST00000491330 PMS2P3Q13401 168 aa14.52□□□□□ -0.09
PDLIM2-217ENST00000491330 OR1Q1Q15612 314 aa14.52□□□□□ -0.09
PDLIM2-217ENST00000491330 HIST3H2AQ7L7L0 130 aa14.52□□□□□ -0.09
PDLIM2-217ENST00000491330 ZIC4Q8N9L1 334 aa14.52□□□□□ -0.09
PDLIM2-217ENST00000491330 HIST1H2ACQ93077 130 aa14.52□□□□□ -0.09
PDLIM2-217ENST00000491330 KTI12Q96EK9 354 aaPredicted RBP14.52□□□□□ -0.09
PDLIM2-217ENST00000491330 BOD1Q96IK1 185 aa14.52□□□□□ -0.09
PDLIM2-217ENST00000491330 CACNG6Q9BXT2 260 aa14.52□□□□□ -0.09
PDLIM2-217ENST00000491330 REG4Q9BYZ8 158 aa14.52□□□□□ -0.09
PDLIM2-217ENST00000491330 KAT8Q9H7Z6 458 aaKnown RBP14.52□□□□□ -0.09
PDLIM2-217ENST00000491330 SAR1AQ9NR31 198 aa14.52□□□□□ -0.09
PDLIM2-217ENST00000491330 FREM1Q5H8C1 2179 aa14.51□□□□□ -0.09
PDLIM2-217ENST00000491330 LOC102725191A0A1B0GVB3 256 aa14.51□□□□□ -0.09
PDLIM2-217ENST00000491330 SSX4O60224 188 aa14.51□□□□□ -0.09
PDLIM2-217ENST00000491330 FMO6PO60774 539 aa14.51□□□□□ -0.09
PDLIM2-217ENST00000491330 MT-ATP6P00846 226 aa14.51□□□□□ -0.09
PDLIM2-217ENST00000491330 CSF3P09919 207 aa14.51□□□□□ -0.09
PDLIM2-217ENST00000491330 HOXB4P17483 251 aaPredicted RBP14.51□□□□□ -0.09
PDLIM2-217ENST00000491330 IFNA8P32881 189 aa14.51□□□□□ -0.09
PDLIM2-217ENST00000491330 SELENOPP49908 381 aa14.51□□□□□ -0.09
PDLIM2-217ENST00000491330 PCBP3P57721 371 aaKnown RBP14.51□□□□□ -0.09
PDLIM2-217ENST00000491330 ROR2Q01974 943 aaKnown RBP14.51□□□□□ -0.09
PDLIM2-217ENST00000491330 KLF10Q13118 480 aa14.51□□□□□ -0.09
PDLIM2-217ENST00000491330 ADRM1Q16186 407 aa14.51□□□□□ -0.09
PDLIM2-217ENST00000491330 TBRG1Q3YBR2 411 aa14.51□□□□□ -0.09
PDLIM2-217ENST00000491330 ERICH5Q6P6B1 374 aa14.51□□□□□ -0.09
PDLIM2-217ENST00000491330 ZNF613Q6PF04 617 aa14.51□□□□□ -0.09
PDLIM2-217ENST00000491330 SEZ6L2Q6UXD5 910 aa14.51□□□□□ -0.09
PDLIM2-217ENST00000491330 ARPINQ7Z6K5 226 aa14.51□□□□□ -0.09
PDLIM2-217ENST00000491330 CIARTQ8N365 385 aaPredicted RBP14.51□□□□□ -0.09
PDLIM2-217ENST00000491330 SCAIQ8N9R8 606 aa14.51□□□□□ -0.09
PDLIM2-217ENST00000491330 WDR31Q8NA23 367 aa14.51□□□□□ -0.09
PDLIM2-217ENST00000491330 ADPRHL1Q8NDY3 354 aa14.51□□□□□ -0.09
PDLIM2-217ENST00000491330 IL17RDQ8NFM7 739 aa14.51□□□□□ -0.09
PDLIM2-217ENST00000491330 OR1K1Q8NGR3 316 aa14.51□□□□□ -0.09
PDLIM2-217ENST00000491330 MAGEE2Q8TD90 523 aaPredicted RBP14.51□□□□□ -0.09
PDLIM2-217ENST00000491330 MCHR1Q99705 422 aa14.51□□□□□ -0.09
PDLIM2-217ENST00000491330 ECSITQ9BQ95 431 aa14.51□□□□□ -0.09
PDLIM2-217ENST00000491330 NSRP1Q9H0G5 558 aaKnown RBP14.51□□□□□ -0.09
PDLIM2-217ENST00000491330 NOX1Q9Y5S8 564 aa14.51□□□□□ -0.09
PDLIM2-217ENST00000491330 FKBP7Q9Y680 259 aa14.51□□□□□ -0.09
PDLIM2-217ENST00000491330 CAPN7Q9Y6W3 813 aa14.51□□□□□ -0.09
PDLIM2-217ENST00000491330 DSCAMO60469 2012 aa14.51□□□□□ -0.09
PDLIM2-217ENST00000491330 A0A087WUJ7 227 aa14.5□□□□□ -0.09
PDLIM2-217ENST00000491330 E7EQL1 145 aa14.5□□□□□ -0.09
PDLIM2-217ENST00000491330 RNF223E7ERA6 249 aa14.5□□□□□ -0.09
PDLIM2-217ENST00000491330 M0QX08 132 aa14.5□□□□□ -0.09
PDLIM2-217ENST00000491330 M0R082 166 aa14.5□□□□□ -0.09
PDLIM2-217ENST00000491330 NDUFAB1O14561 156 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms