RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 FAM111BQ6SJ93 734 aa17.75■□□□□ 0.43
SNAPC3-206ENST00000490969 LRRN1Q6UXK5 716 aa17.75■□□□□ 0.43
SNAPC3-206ENST00000490969 AMZ2Q86W34 360 aa17.75■□□□□ 0.43
SNAPC3-206ENST00000490969 TMEM17Q86X19 198 aa17.75■□□□□ 0.43
SNAPC3-206ENST00000490969 MUC20Q8N307 709 aaPredicted RBP17.75■□□□□ 0.43
SNAPC3-206ENST00000490969 ACTR10Q9NZ32 417 aa17.75■□□□□ 0.43
SNAPC3-206ENST00000490969 NDRG3Q9UGV2 375 aa17.75■□□□□ 0.43
SNAPC3-206ENST00000490969 MSRAQ9UJ68 235 aa17.75■□□□□ 0.43
SNAPC3-206ENST00000490969 TBC1D3EA0A087X179 549 aa17.75■□□□□ 0.43
SNAPC3-206ENST00000490969 RPN2P04844 631 aa17.75■□□□□ 0.43
SNAPC3-206ENST00000490969 H2AFB1P0C5Y9 115 aa17.75■□□□□ 0.43
SNAPC3-206ENST00000490969 OR2T7P0C7T2 308 aa17.75■□□□□ 0.43
SNAPC3-206ENST00000490969 CERS1P27544 350 aa17.75■□□□□ 0.43
SNAPC3-206ENST00000490969 BCL6P41182 706 aa17.75■□□□□ 0.43
SNAPC3-206ENST00000490969 NAA10P41227 235 aaPredicted RBP17.75■□□□□ 0.43
SNAPC3-206ENST00000490969 ILF3Q12906 894 aaKnown RBP eCLIP17.75■□□□□ 0.431e-13■■■■■ 45.5
SNAPC3-206ENST00000490969 FAM74A1Q5RGS3 127 aa17.75■□□□□ 0.43
SNAPC3-206ENST00000490969 ABHD17CQ6PCB6 329 aa17.75■□□□□ 0.43
SNAPC3-206ENST00000490969 VITQ6UXI7 678 aa17.75■□□□□ 0.43
SNAPC3-206ENST00000490969 OR2T27Q8NH04 317 aa17.75■□□□□ 0.43
SNAPC3-206ENST00000490969 LRIG1Q96JA1 1093 aa17.75■□□□□ 0.43
SNAPC3-206ENST00000490969 ZNF681Q96N22 645 aa17.75■□□□□ 0.43
SNAPC3-206ENST00000490969 BARX1Q9HBU1 254 aaPredicted RBP17.75■□□□□ 0.43
SNAPC3-206ENST00000490969 RASL12Q9NYN1 266 aa17.75■□□□□ 0.43
SNAPC3-206ENST00000490969 F5P12259 2224 aa17.75■□□□□ 0.43
SNAPC3-206ENST00000490969 ADH7P40394 386 aa17.74■□□□□ 0.43
SNAPC3-206ENST00000490969 ZIC1Q15915 447 aa17.74■□□□□ 0.43
SNAPC3-206ENST00000490969 MFSD12Q6NUT3 480 aa17.74■□□□□ 0.43
SNAPC3-206ENST00000490969 TNFAIP8L1Q8WVP5 186 aa17.74■□□□□ 0.43
SNAPC3-206ENST00000490969 CNN2Q99439 309 aaKnown RBP17.74■□□□□ 0.43
SNAPC3-206ENST00000490969 MED31Q9Y3C7 131 aa17.74■□□□□ 0.43
SNAPC3-206ENST00000490969 TMEM272A0A1B0GTI8 110 aa17.74■□□□□ 0.43
SNAPC3-206ENST00000490969 VEGFDO43915 354 aa17.74■□□□□ 0.43
SNAPC3-206ENST00000490969 GPRIN2O60269 458 aa17.74■□□□□ 0.43
SNAPC3-206ENST00000490969 UBBP0CG47 229 aa17.74■□□□□ 0.43
SNAPC3-206ENST00000490969 UBCP0CG48 685 aaKnown RBP17.74■□□□□ 0.43
SNAPC3-206ENST00000490969 NAT2P11245 290 aa17.74■□□□□ 0.43
SNAPC3-206ENST00000490969 FAUP35544 74 aaKnown RBP17.74■□□□□ 0.43
SNAPC3-206ENST00000490969 MAGEB1P43366 347 aa17.74■□□□□ 0.43
SNAPC3-206ENST00000490969 RPS27AP62979 156 aaKnown RBP17.74■□□□□ 0.43
SNAPC3-206ENST00000490969 UBA52P62987 128 aaKnown RBP17.74■□□□□ 0.43
SNAPC3-206ENST00000490969 MPPED2Q15777 294 aa17.74■□□□□ 0.43
SNAPC3-206ENST00000490969 NDUFAF6Q330K2 333 aa17.74■□□□□ 0.43
SNAPC3-206ENST00000490969 ELP2Q6IA86 826 aa17.74■□□□□ 0.43
SNAPC3-206ENST00000490969 SLC35F2Q8IXU6 374 aa17.74■□□□□ 0.43
SNAPC3-206ENST00000490969 OR51L1Q8NGJ5 315 aa17.74■□□□□ 0.43
SNAPC3-206ENST00000490969 NSMAFQ92636 917 aa17.74■□□□□ 0.43
SNAPC3-206ENST00000490969 MRPL38Q96DV4 380 aaKnown RBP17.74■□□□□ 0.43
SNAPC3-206ENST00000490969 MYADMQ96S97 322 aa17.74■□□□□ 0.43
SNAPC3-206ENST00000490969 MLXQ9UH92 298 aa17.74■□□□□ 0.43
SNAPC3-206ENST00000490969 ZNF780BQ9Y6R6 833 aa17.74■□□□□ 0.43
SNAPC3-206ENST00000490969 C6P13671 934 aa17.73■□□□□ 0.43
SNAPC3-206ENST00000490969 MNDAP41218 407 aa17.73■□□□□ 0.43
SNAPC3-206ENST00000490969 FNTBP49356 437 aa17.73■□□□□ 0.43
SNAPC3-206ENST00000490969 C11orf88Q6PI97 169 aa17.73■□□□□ 0.43
SNAPC3-206ENST00000490969 C15orf40Q8WUR7 153 aa17.73■□□□□ 0.43
SNAPC3-206ENST00000490969 MIB2Q96AX9 1013 aa17.73■□□□□ 0.43
SNAPC3-206ENST00000490969 NARS2Q96I59 477 aaKnown RBP17.73■□□□□ 0.43
SNAPC3-206ENST00000490969 TMEM138Q9NPI0 162 aa17.73■□□□□ 0.43
SNAPC3-206ENST00000490969 IFNGP01579 166 aa17.73■□□□□ 0.43
SNAPC3-206ENST00000490969 MGMTP16455 207 aa17.73■□□□□ 0.43
SNAPC3-206ENST00000490969 PRDX1Q06830 199 aaKnown RBP17.73■□□□□ 0.43
SNAPC3-206ENST00000490969 DUSP8Q13202 625 aa17.73■□□□□ 0.43
SNAPC3-206ENST00000490969 CEBPEQ15744 281 aa17.73■□□□□ 0.43
SNAPC3-206ENST00000490969 PCGF3Q3KNV8 242 aa17.73■□□□□ 0.43
SNAPC3-206ENST00000490969 OR7G2Q8NG99 324 aa17.73■□□□□ 0.43
SNAPC3-206ENST00000490969 OR4C16Q8NGL9 310 aa17.73■□□□□ 0.43
SNAPC3-206ENST00000490969 MS4A4EQ96PG1 132 aa17.73■□□□□ 0.43
SNAPC3-206ENST00000490969 KXD1Q9BQD3 176 aa17.73■□□□□ 0.43
SNAPC3-206ENST00000490969 MEPEQ9NQ76 525 aaPredicted RBP17.73■□□□□ 0.43
SNAPC3-206ENST00000490969 OR6C74A6NCV1 312 aa17.72■□□□□ 0.43
SNAPC3-206ENST00000490969 TMEM127O75204 238 aa17.72■□□□□ 0.43
SNAPC3-206ENST00000490969 THBS1P07996 1170 aa17.72■□□□□ 0.43
SNAPC3-206ENST00000490969 CALCBP10092 127 aa17.72■□□□□ 0.43
SNAPC3-206ENST00000490969 ACHEP22303 614 aa17.72■□□□□ 0.43
SNAPC3-206ENST00000490969 CD96P40200 585 aa17.72■□□□□ 0.43
SNAPC3-206ENST00000490969 FGL2Q14314 439 aa17.72■□□□□ 0.43
SNAPC3-206ENST00000490969 AMZ1Q400G9 498 aa17.72■□□□□ 0.43
SNAPC3-206ENST00000490969 MRPL2Q5T653 305 aaKnown RBP17.72■□□□□ 0.43
SNAPC3-206ENST00000490969 MOB3CQ70IA8 216 aa17.72■□□□□ 0.43
SNAPC3-206ENST00000490969 ZNF765Q7L2R6 523 aa17.72■□□□□ 0.43
SNAPC3-206ENST00000490969 GLB1L2Q8IW92 636 aa17.72■□□□□ 0.43
SNAPC3-206ENST00000490969 POMGNT2Q8NAT1 580 aa17.72■□□□□ 0.43
SNAPC3-206ENST00000490969 CAMKVQ8NCB2 501 aa17.72■□□□□ 0.43
SNAPC3-206ENST00000490969 OR52E2Q8NGJ4 325 aa17.72■□□□□ 0.43
SNAPC3-206ENST00000490969 MRI1Q9BV20 369 aa17.72■□□□□ 0.43
SNAPC3-206ENST00000490969 TM7SF3Q9NS93 570 aa17.72■□□□□ 0.43
SNAPC3-206ENST00000490969 NCDNQ9UBB6 729 aa17.72■□□□□ 0.43
SNAPC3-206ENST00000490969 ICAM5Q9UMF0 924 aa17.72■□□□□ 0.43
SNAPC3-206ENST00000490969 DNAH14Q0VDD8 3507 aa17.72■□□□□ 0.43
SNAPC3-206ENST00000490969 RFPL4AA6NLU0 287 aa17.72■□□□□ 0.43
SNAPC3-206ENST00000490969 RFPL4AL1F8VTS6 287 aa17.72■□□□□ 0.43
SNAPC3-206ENST00000490969 EIF4E2O60573 245 aaKnown RBP17.72■□□□□ 0.43
SNAPC3-206ENST00000490969 ZNF254O75437 659 aa17.72■□□□□ 0.43
SNAPC3-206ENST00000490969 ADH1CP00326 375 aa17.72■□□□□ 0.43
SNAPC3-206ENST00000490969 S100A12P80511 92 aa17.72■□□□□ 0.43
SNAPC3-206ENST00000490969 GAS6Q14393 721 aa17.72■□□□□ 0.43
SNAPC3-206ENST00000490969 HFEQ30201 348 aa17.72■□□□□ 0.43
SNAPC3-206ENST00000490969 ARHGAP11BQ3KRB8 267 aa17.72■□□□□ 0.43
SNAPC3-206ENST00000490969 ARHGAP11AQ6P4F7 1023 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms