RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 BOD1Q96IK1 185 aa17.2■□□□□ 0.34
SREBF1-216ENST00000490796 VRK1Q99986 396 aaPredicted RBP17.2■□□□□ 0.34
SREBF1-216ENST00000490796 BEX2Q9BXY8 128 aa17.2■□□□□ 0.34
SREBF1-216ENST00000490796 SELENONQ9NZV5 590 aa17.2■□□□□ 0.34
SREBF1-216ENST00000490796 USH1CQ9Y6N9 552 aa17.2■□□□□ 0.34
SREBF1-216ENST00000490796 A0A096LNT2 108 aa17.19■□□□□ 0.34
SREBF1-216ENST00000490796 AKAP8O43823 692 aaKnown RBP17.19■□□□□ 0.34
SREBF1-216ENST00000490796 OR2T1O43869 369 aa17.19■□□□□ 0.34
SREBF1-216ENST00000490796 NPIPB7O75200 414 aa17.19■□□□□ 0.34
SREBF1-216ENST00000490796 UPK3AO75631 287 aa17.19■□□□□ 0.34
SREBF1-216ENST00000490796 NCALDP61601 193 aa17.19■□□□□ 0.34
SREBF1-216ENST00000490796 VHLLQ6RSH7 139 aa17.19■□□□□ 0.34
SREBF1-216ENST00000490796 C5orf46Q6UWT4 87 aa17.19■□□□□ 0.34
SREBF1-216ENST00000490796 KRT73Q86Y46 540 aa17.19■□□□□ 0.34
SREBF1-216ENST00000490796 GPR137CQ8N3F9 429 aa17.19■□□□□ 0.34
SREBF1-216ENST00000490796 BCL2L2Q92843 193 aaPredicted RBP17.19■□□□□ 0.34
SREBF1-216ENST00000490796 SLC38A4Q969I6 547 aa17.19■□□□□ 0.34
SREBF1-216ENST00000490796 PIMREGQ9BSJ6 248 aa17.19■□□□□ 0.34
SREBF1-216ENST00000490796 SPATA5L1Q9BVQ7 753 aa17.19■□□□□ 0.34
SREBF1-216ENST00000490796 LINC00470Q9BZP3 86 aa17.19■□□□□ 0.34
SREBF1-216ENST00000490796 PAIP1Q9H074 479 aaKnown RBP17.19■□□□□ 0.34
SREBF1-216ENST00000490796 CA10Q9NS85 328 aa17.19■□□□□ 0.34
SREBF1-216ENST00000490796 SLC13A4Q9UKG4 626 aa17.19■□□□□ 0.34
SREBF1-216ENST00000490796 RCE1Q9Y256 329 aa17.19■□□□□ 0.34
SREBF1-216ENST00000490796 CHST2Q9Y4C5 530 aa17.19■□□□□ 0.34
SREBF1-216ENST00000490796 ARPC4-TTLL3A0A0A6YYG9 625 aa17.18■□□□□ 0.34
SREBF1-216ENST00000490796 B9A039 149 aa17.18■□□□□ 0.34
SREBF1-216ENST00000490796 NR5A2O00482 541 aa17.18■□□□□ 0.34
SREBF1-216ENST00000490796 AIM2O14862 343 aa17.18■□□□□ 0.34
SREBF1-216ENST00000490796 LY6HO94772 140 aa17.18■□□□□ 0.34
SREBF1-216ENST00000490796 HOXB1P14653 301 aaPredicted RBP17.18■□□□□ 0.34
SREBF1-216ENST00000490796 ETS2P15036 469 aa17.18■□□□□ 0.34
SREBF1-216ENST00000490796 TUBA1BP68363 451 aa17.18■□□□□ 0.34
SREBF1-216ENST00000490796 TUBA4AP68366 448 aa17.18■□□□□ 0.34
SREBF1-216ENST00000490796 LSM11P83369 360 aaKnown RBP eCLIP17.18■□□□□ 0.34
SREBF1-216ENST00000490796 GGTLC2Q14390 218 aa17.18■□□□□ 0.34
SREBF1-216ENST00000490796 SWI5Q1ZZU3 235 aa17.18■□□□□ 0.34
SREBF1-216ENST00000490796 GCNT6Q5T4J0 391 aa17.18■□□□□ 0.34
SREBF1-216ENST00000490796 EPGNQ6UW88 154 aa17.18■□□□□ 0.34
SREBF1-216ENST00000490796 TUBA1AQ71U36 451 aa17.18■□□□□ 0.34
SREBF1-216ENST00000490796 OR4F15Q8NGB8 312 aa17.18■□□□□ 0.34
SREBF1-216ENST00000490796 MAGEE2Q8TD90 523 aaPredicted RBP17.18■□□□□ 0.34
SREBF1-216ENST00000490796 NANOS1Q8WY41 292 aaKnown RBP17.18■□□□□ 0.34
SREBF1-216ENST00000490796 KTI12Q96EK9 354 aaPredicted RBP17.18■□□□□ 0.34
SREBF1-216ENST00000490796 OXGR1Q96P68 337 aa17.18■□□□□ 0.34
SREBF1-216ENST00000490796 C12orf10Q9HB07 376 aa17.18■□□□□ 0.34
SREBF1-216ENST00000490796 TMBIM4Q9HC24 238 aa17.18■□□□□ 0.34
SREBF1-216ENST00000490796 TCF7L2Q9NQB0 619 aa17.18■□□□□ 0.34
SREBF1-216ENST00000490796 LPAR3Q9UBY5 353 aa17.18■□□□□ 0.34
SREBF1-216ENST00000490796 FBN1P35555 2871 aaKnown RBP17.18■□□□□ 0.34
SREBF1-216ENST00000490796 FTCDNL1E5RQL4 147 aa17.17■□□□□ 0.34
SREBF1-216ENST00000490796 NDUFS8O00217 210 aa17.17■□□□□ 0.34
SREBF1-216ENST00000490796 OR4A8P0C604 315 aa17.17■□□□□ 0.34
SREBF1-216ENST00000490796 FAM157CP0CG43 387 aa17.17■□□□□ 0.34
SREBF1-216ENST00000490796 BMP2P12643 396 aa17.17■□□□□ 0.34
SREBF1-216ENST00000490796 PPIBP23284 216 aaKnown RBP17.17■□□□□ 0.34
SREBF1-216ENST00000490796 PRKAR1BP31321 381 aa17.17■□□□□ 0.34
SREBF1-216ENST00000490796 GZMKP49863 264 aa17.17■□□□□ 0.34
SREBF1-216ENST00000490796 NAAAQ02083 359 aa17.17■□□□□ 0.34
SREBF1-216ENST00000490796 FAM69AQ5T7M9 428 aa17.17■□□□□ 0.34
SREBF1-216ENST00000490796 ARFGEF3Q5TH69 2177 aa17.17■□□□□ 0.34
SREBF1-216ENST00000490796 NFKBIDQ8NI38 313 aa17.17■□□□□ 0.34
SREBF1-216ENST00000490796 DNAJA4Q8WW22 397 aaPredicted RBP17.17■□□□□ 0.34
SREBF1-216ENST00000490796 TMEM158Q8WZ71 300 aa17.17■□□□□ 0.34
SREBF1-216ENST00000490796 TLCD1Q96CP7 247 aa17.17■□□□□ 0.34
SREBF1-216ENST00000490796 SHARPINQ9H0F6 387 aa17.17■□□□□ 0.34
SREBF1-216ENST00000490796 FBXO9Q9UK97 447 aaPredicted RBP17.17■□□□□ 0.34
SREBF1-216ENST00000490796 M0R082 166 aa17.16■□□□□ 0.34
SREBF1-216ENST00000490796 ERCC1P07992 297 aaPredicted RBP17.16■□□□□ 0.34
SREBF1-216ENST00000490796 NQO1P15559 274 aaKnown RBP17.16■□□□□ 0.34
SREBF1-216ENST00000490796 ZNF16P17020 682 aaPredicted RBP17.16■□□□□ 0.34
SREBF1-216ENST00000490796 CAPZA2P47755 286 aa17.16■□□□□ 0.34
SREBF1-216ENST00000490796 ARF1P84077 181 aaKnown RBP17.16■□□□□ 0.34
SREBF1-216ENST00000490796 EGR4Q05215 589 aa17.16■□□□□ 0.34
SREBF1-216ENST00000490796 MST1LQ2TV78 715 aa17.16■□□□□ 0.34
SREBF1-216ENST00000490796 C3orf36Q3SXR2 165 aa17.16■□□□□ 0.34
SREBF1-216ENST00000490796 IQCCQ4KMZ1 466 aa17.16■□□□□ 0.34
SREBF1-216ENST00000490796 ALG10BQ5I7T1 473 aa17.16■□□□□ 0.34
SREBF1-216ENST00000490796 REEP3Q6NUK4 255 aa17.16■□□□□ 0.34
SREBF1-216ENST00000490796 H1FNTQ75WM6 255 aaPredicted RBP17.16■□□□□ 0.34
SREBF1-216ENST00000490796 LINGO2Q7L985 606 aa17.16■□□□□ 0.34
SREBF1-216ENST00000490796 NET1Q7Z628 596 aaPredicted RBP17.16■□□□□ 0.34
SREBF1-216ENST00000490796 PIK3C3Q8NEB9 887 aa17.16■□□□□ 0.34
SREBF1-216ENST00000490796 ANKK1Q8NFD2 765 aa17.16■□□□□ 0.34
SREBF1-216ENST00000490796 ZNF417Q8TAU3 575 aa17.16■□□□□ 0.34
SREBF1-216ENST00000490796 LRRC8CQ8TDW0 803 aa17.16■□□□□ 0.34
SREBF1-216ENST00000490796 SORCS2Q96PQ0 1159 aa17.16■□□□□ 0.34
SREBF1-216ENST00000490796 ZNF587Q96SQ5 575 aaPredicted RBP17.16■□□□□ 0.34
SREBF1-216ENST00000490796 PTDSS2Q9BVG9 487 aa17.16■□□□□ 0.34
SREBF1-216ENST00000490796 TMEM27Q9HBJ8 222 aa17.16■□□□□ 0.34
SREBF1-216ENST00000490796 MYOZ1Q9NP98 299 aaPredicted RBP17.16■□□□□ 0.34
SREBF1-216ENST00000490796 FBN3Q75N90 2809 aa17.16■□□□□ 0.34
SREBF1-216ENST00000490796 TRAV36DV7A0A075B6V5 113 aa17.15■□□□□ 0.34
SREBF1-216ENST00000490796 A0A1B0GWA3 101 aa17.15■□□□□ 0.34
SREBF1-216ENST00000490796 PRORSD1PA6NEY8 169 aa17.15■□□□□ 0.34
SREBF1-216ENST00000490796 PDE5AO76074 875 aa17.15■□□□□ 0.34
SREBF1-216ENST00000490796 TGDSO95455 350 aa17.15■□□□□ 0.34
SREBF1-216ENST00000490796 CECR9P0C854 216 aa17.15■□□□□ 0.34
SREBF1-216ENST00000490796 IGHV4-31P0DP07 118 aa17.15■□□□□ 0.34
SREBF1-216ENST00000490796 CBLP22681 906 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms