RNA–Protein interactions for RNA: ENST00000490444.2

PUM3-204, Transcript of pumilio RNA binding family member 3, human

TSL 5

Gene PUM3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM3-204	ENST00000490444	C12orf4	Q9NQ89	552 aa		2.19	□□□□□ -2.06
PUM3-204	ENST00000490444	SAMSN1	Q9NSI8	373 aa	Known RBP	2.19	□□□□□ -2.06
PUM3-204	ENST00000490444	C19orf12	Q9NSK7	152 aa		2.19	□□□□□ -2.06
PUM3-204	ENST00000490444	PLCXD1	Q9NUJ7	323 aa		2.19	□□□□□ -2.06
PUM3-204	ENST00000490444	EXD2	Q9NVH0	621 aa		2.19	□□□□□ -2.06
PUM3-204	ENST00000490444	C2orf42	Q9NWW7	574 aa		2.19	□□□□□ -2.06
PUM3-204	ENST00000490444	TAS2R9	Q9NYW1	312 aa		2.19	□□□□□ -2.06
PUM3-204	ENST00000490444	IL36G	Q9NZH8	169 aa		2.19	□□□□□ -2.06
PUM3-204	ENST00000490444	EIF3K	Q9UBQ5	218 aa	Known RBP	2.19	□□□□□ -2.06
PUM3-204	ENST00000490444	KIF25	Q9UIL4	384 aa		2.19	□□□□□ -2.06
PUM3-204	ENST00000490444	STOML2	Q9UJZ1	356 aa		2.19	□□□□□ -2.06
PUM3-204	ENST00000490444	NXT1	Q9UKK6	140 aa	Known RBP	2.19	□□□□□ -2.06
PUM3-204	ENST00000490444	CLEC4E	Q9ULY5	219 aa		2.19	□□□□□ -2.06
PUM3-204	ENST00000490444	TBL2	Q9Y4P3	447 aa	Known RBP	2.19	□□□□□ -2.06
PUM3-204	ENST00000490444	POLR3H	Q9Y535	204 aa	Predicted RBP	2.19	□□□□□ -2.06
PUM3-204	ENST00000490444	WIF1	Q9Y5W5	379 aa		2.19	□□□□□ -2.06
PUM3-204	ENST00000490444	CACNG2	Q9Y698	323 aa		2.19	□□□□□ -2.06
PUM3-204	ENST00000490444	CDH10	Q9Y6N8	788 aa		2.19	□□□□□ -2.06
PUM3-204	ENST00000490444	MYH14	Q7Z406	1995 aa	Known RBP	2.19	□□□□□ -2.06
PUM3-204	ENST00000490444	NACAD	O15069	1562 aa		2.19	□□□□□ -2.06
PUM3-204	ENST00000490444	MN1	Q10571	1320 aa	Predicted RBP	2.18	□□□□□ -2.06
PUM3-204	ENST00000490444		A0A1B0GTI1	187 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	GNG14	A0A1W2PPG7	69 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444		A0A1W2PRF3	423 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444		A0A1W2PRM7	423 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	MED19	A0JLT2	244 aa	Predicted RBP	2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	FUOM	A2VDF0	154 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	CCDC182	A6NF36	153 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	FAM74A7	A6NL05	159 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	PRR32	B1ATL7	298 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444		G3V4G9	280 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444		M0QXV9	152 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	CCL24	O00175	119 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	SIRPB1	O00241	398 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	GOSR2	O14653	212 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	PRMT5	O14744	637 aa	Predicted RBP	2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	SH2D1B	O14796	132 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	ZBTB5	O15062	677 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	CHST1	O43916	411 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	PFKFB2	O60825	505 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	RAMP3	O60896	148 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	VAMP5	O95183	116 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	PSMG1	O95456	288 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	NADK	O95544	446 aa	Predicted RBP	2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	HLA-H	P01893	362 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	APOE	P02649	317 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	AMBP	P02760	352 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	ATP1A1	P05023	1023 aa	Known RBP	2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	ALDOB	P05062	364 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	GIMD1	P0DJR0	217 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	MBL2	P11226	248 aa	Predicted RBP	2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	PGC	P20142	388 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	NPR2	P20594	1047 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	IMPDH1	P20839	514 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	GPX3	P22352	226 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	CA4	P22748	312 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	S100A1	P23297	94 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	DTYMK	P23919	212 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	CXCR2	P25025	360 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	PRDX3	P30048	256 aa	Known RBP	2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	IFNA8	P32881	189 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	DUT	P33316	252 aa	Known RBP	2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	RANBP1	P43487	201 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	GPR1	P46091	355 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	GNPDA1	P46926	289 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	P2RY1	P47900	373 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	CX3CR1	P49238	355 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	VEGFC	P49767	419 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	XK	P51811	444 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	PDX1	P52945	283 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	CLDN17	P56750	224 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	B3GALT5-AS1	P59052	145 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	RPS4X	P62701	263 aa	Known RBP	2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	MYL7	Q01449	175 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	OC90	Q02509	493 aa	Predicted RBP	2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	GUCY2D	Q02846	1103 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	CKAP4	Q07065	602 aa	Known RBP	2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	C1orf61	Q13536	156 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	ITGA9	Q13797	1035 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	KLF5	Q13887	457 aa	Predicted RBP	2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	ATXN7L3	Q14CW9	347 aa	Predicted RBP	2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	OR1C1	Q15619	314 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	IMPG1	Q17R60	797 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	HLA-B	Q31612	363 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	CCDC153	Q494R4	210 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	COX19	Q49B96	90 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	FAM74A3	Q4VXF1	159 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	AKIRIN2	Q53H80	203 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	YIF1B	Q5BJH7	314 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	PIGG	Q5H8A4	983 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	DMRTC1	Q5HYR2	192 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	LY6G6F	Q5SQ64	297 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	BEND6	Q5SZJ8	279 aa	Predicted RBP	2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	UTF1	Q5T230	341 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	BEND3	Q5T5X7	828 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	IDNK	Q5T6J7	187 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	LCE1C	Q5T751	118 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	LCE1B	Q5T7P3	118 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	OR5M10	Q6IEU7	315 aa		2.18	□□□□□ -2.06
PUM3-204	ENST00000490444	SLC27A4	Q6P1M0	643 aa		2.18	□□□□□ -2.06

Retrieved 100 of 20,778 RNA–protein pairs in 43 ms