RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 SELENOPP49908 381 aa15.32■□□□□ 0.04
SEC13-218ENST00000490283 CLDN17P56750 224 aa15.32■□□□□ 0.04
SEC13-218ENST00000490283 SF3A3Q12874 501 aaKnown RBP eCLIP15.32■□□□□ 0.045e-7■■■□□ 16.9
SEC13-218ENST00000490283 KLF10Q13118 480 aa15.32■□□□□ 0.04
SEC13-218ENST00000490283 HMBOX1Q6NT76 420 aa15.32■□□□□ 0.04
SEC13-218ENST00000490283 ZNF613Q6PF04 617 aa15.32■□□□□ 0.04
SEC13-218ENST00000490283 H1FNTQ75WM6 255 aaPredicted RBP15.32■□□□□ 0.04
SEC13-218ENST00000490283 EPHX4Q8IUS5 362 aa15.32■□□□□ 0.04
SEC13-218ENST00000490283 PCYOX1LQ8NBM8 494 aa15.32■□□□□ 0.04
SEC13-218ENST00000490283 OR8J3Q8NGG0 315 aa15.32■□□□□ 0.04
SEC13-218ENST00000490283 OR6S1Q8NH40 331 aa15.32■□□□□ 0.04
SEC13-218ENST00000490283 ZNF417Q8TAU3 575 aa15.32■□□□□ 0.04
SEC13-218ENST00000490283 NEUROG1Q92886 237 aa15.32■□□□□ 0.04
SEC13-218ENST00000490283 TAAR8Q969N4 342 aa15.32■□□□□ 0.04
SEC13-218ENST00000490283 ALKBH3Q96Q83 286 aaPredicted RBP15.32■□□□□ 0.04
SEC13-218ENST00000490283 ZNF587Q96SQ5 575 aaPredicted RBP15.32■□□□□ 0.04
SEC13-218ENST00000490283 PRR14Q9BWN1 585 aa15.32■□□□□ 0.04
SEC13-218ENST00000490283 FKRPQ9H9S5 495 aa15.32■□□□□ 0.04
SEC13-218ENST00000490283 OBP2BQ9NPH6 170 aa15.32■□□□□ 0.04
SEC13-218ENST00000490283 GID8Q9NWU2 228 aa15.32■□□□□ 0.04
SEC13-218ENST00000490283 KLHL14Q9P2G3 628 aa15.32■□□□□ 0.04
SEC13-218ENST00000490283 DSCAMO60469 2012 aa15.32■□□□□ 0.04
SEC13-218ENST00000490283 ROS1P08922 2347 aa15.32■□□□□ 0.04
SEC13-218ENST00000490283 SHISA9B4DS77 424 aa15.31■□□□□ 0.04
SEC13-218ENST00000490283 M0R3H8 397 aa15.31■□□□□ 0.04
SEC13-218ENST00000490283 FBP2O00757 339 aa15.31■□□□□ 0.04
SEC13-218ENST00000490283 SOD3P08294 240 aa15.31■□□□□ 0.04
SEC13-218ENST00000490283 DANCRP0C864 163 aa15.31■□□□□ 0.04
SEC13-218ENST00000490283 CBLP22681 906 aa15.31■□□□□ 0.04
SEC13-218ENST00000490283 PAX7P23759 505 aa15.31■□□□□ 0.04
SEC13-218ENST00000490283 CDH12P55289 794 aa15.31■□□□□ 0.04
SEC13-218ENST00000490283 SH3BGRP55822 239 aaPredicted RBP15.31■□□□□ 0.04
SEC13-218ENST00000490283 UBE2NP61088 152 aaKnown RBP15.31■□□□□ 0.04
SEC13-218ENST00000490283 GUCY1A3Q02108 690 aa15.31■□□□□ 0.04
SEC13-218ENST00000490283 ETFDHQ16134 617 aa15.31■□□□□ 0.04
SEC13-218ENST00000490283 NRF1Q16656 503 aa15.31■□□□□ 0.04
SEC13-218ENST00000490283 VMACQ2NL98 169 aa15.31■□□□□ 0.04
SEC13-218ENST00000490283 AGAP6Q5VW22 663 aa15.31■□□□□ 0.04
SEC13-218ENST00000490283 NANOGP8Q6NSW7 305 aa15.31■□□□□ 0.04
SEC13-218ENST00000490283 KDM8Q8N371 416 aa15.31■□□□□ 0.04
SEC13-218ENST00000490283 ADPRHL1Q8NDY3 354 aa15.31■□□□□ 0.04
SEC13-218ENST00000490283 LRRC58Q96CX6 371 aa15.31■□□□□ 0.04
SEC13-218ENST00000490283 ARHGDIGQ99819 225 aa15.31■□□□□ 0.04
SEC13-218ENST00000490283 TMEM43Q9BTV4 400 aa15.31■□□□□ 0.04
SEC13-218ENST00000490283 C1QTNF6Q9BXI9 259 aa15.31■□□□□ 0.04
SEC13-218ENST00000490283 RSPO3Q9BXY4 272 aaPredicted RBP15.31■□□□□ 0.04
SEC13-218ENST00000490283 LINC00470Q9BZP3 86 aa15.31■□□□□ 0.04
SEC13-218ENST00000490283 NANOGQ9H9S0 305 aa15.31■□□□□ 0.04
SEC13-218ENST00000490283 SAR1AQ9NR31 198 aa15.31■□□□□ 0.04
SEC13-218ENST00000490283 CAPN7Q9Y6W3 813 aa15.31■□□□□ 0.04
SEC13-218ENST00000490283 RAI1Q7Z5J4 1906 aaPredicted RBP15.31■□□□□ 0.04
SEC13-218ENST00000490283 C2CD3Q4AC94 2353 aa15.31■□□□□ 0.04
SEC13-218ENST00000490283 IGKV1D-42A0A075B6H8 117 aa15.3■□□□□ 0.04
SEC13-218ENST00000490283 H7C1Q1 480 aa15.3■□□□□ 0.04
SEC13-218ENST00000490283 CHP2O43745 196 aa15.3■□□□□ 0.04
SEC13-218ENST00000490283 FZD7O75084 574 aa15.3■□□□□ 0.04
SEC13-218ENST00000490283 DUSP7Q16829 419 aa15.3■□□□□ 0.04
SEC13-218ENST00000490283 REP15Q6BDI9 236 aa15.3■□□□□ 0.04
SEC13-218ENST00000490283 ERICH5Q6P6B1 374 aa15.3■□□□□ 0.04
SEC13-218ENST00000490283 UEVLDQ8IX04 471 aa15.3■□□□□ 0.04
SEC13-218ENST00000490283 GPR137CQ8N3F9 429 aa15.3■□□□□ 0.04
SEC13-218ENST00000490283 SCAIQ8N9R8 606 aa15.3■□□□□ 0.04
SEC13-218ENST00000490283 WDR31Q8NA23 367 aa15.3■□□□□ 0.04
SEC13-218ENST00000490283 PIK3C3Q8NEB9 887 aa15.3■□□□□ 0.04
SEC13-218ENST00000490283 VANGL1Q8TAA9 524 aaPredicted RBP15.3■□□□□ 0.04
SEC13-218ENST00000490283 PROX1Q92786 737 aa15.3■□□□□ 0.04
SEC13-218ENST00000490283 ZNF317Q96PQ6 595 aaPredicted RBP15.3■□□□□ 0.04
SEC13-218ENST00000490283 KCNS3Q9BQ31 491 aa15.3■□□□□ 0.04
SEC13-218ENST00000490283 GSX1Q9H4S2 264 aaPredicted RBP15.3■□□□□ 0.04
SEC13-218ENST00000490283 CCDC134Q9H6E4 229 aa15.3■□□□□ 0.04
SEC13-218ENST00000490283 MOV10Q9HCE1 1003 aaKnown RBP15.3■□□□□ 0.04
SEC13-218ENST00000490283 ARID1AO14497 2285 aa15.29■□□□□ 0.04
SEC13-218ENST00000490283 CPSF4LA6NMK7 179 aaKnown RBP15.29■□□□□ 0.04
SEC13-218ENST00000490283 SLC22A2O15244 555 aa15.29■□□□□ 0.04
SEC13-218ENST00000490283 MT-ATP6P00846 226 aa15.29■□□□□ 0.04
SEC13-218ENST00000490283 IFNA14P01570 189 aa15.29■□□□□ 0.04
SEC13-218ENST00000490283 CD247P20963 164 aa15.29■□□□□ 0.04
SEC13-218ENST00000490283 ROR2Q01974 943 aaKnown RBP15.29■□□□□ 0.04
SEC13-218ENST00000490283 PMS2P3Q13401 168 aa15.29■□□□□ 0.04
SEC13-218ENST00000490283 PGGHGQ32M88 737 aa15.29■□□□□ 0.04
SEC13-218ENST00000490283 HIKESHIQ53FT3 197 aa15.29■□□□□ 0.04
SEC13-218ENST00000490283 RABL3Q5HYI8 236 aa15.29■□□□□ 0.04
SEC13-218ENST00000490283 ENTPD8Q5MY95 495 aa15.29■□□□□ 0.04
SEC13-218ENST00000490283 CLEC9AQ6UXN8 241 aa15.29■□□□□ 0.04
SEC13-218ENST00000490283 SNX32Q86XE0 403 aa15.29■□□□□ 0.04
SEC13-218ENST00000490283 FBXL14Q8N1E6 418 aa15.29■□□□□ 0.04
SEC13-218ENST00000490283 GPR32P1Q8NGA4 272 aa15.29■□□□□ 0.04
SEC13-218ENST00000490283 OR6T1Q8NGN1 323 aa15.29■□□□□ 0.04
SEC13-218ENST00000490283 OR1K1Q8NGR3 316 aa15.29■□□□□ 0.04
SEC13-218ENST00000490283 COX4I2Q96KJ9 171 aa15.29■□□□□ 0.04
SEC13-218ENST00000490283 HS6ST2Q96MM7 605 aa15.29■□□□□ 0.04
SEC13-218ENST00000490283 BARX1Q9HBU1 254 aaPredicted RBP15.29■□□□□ 0.04
SEC13-218ENST00000490283 SEC14L4Q9UDX3 406 aa15.29■□□□□ 0.04
SEC13-218ENST00000490283 ATP23Q9Y6H3 246 aa15.29■□□□□ 0.04
SEC13-218ENST00000490283 PRR14LQ5THK1 2151 aa15.28■□□□□ 0.04
SEC13-218ENST00000490283 FLNAP21333 2647 aaKnown RBP15.28■□□□□ 0.04
SEC13-218ENST00000490283 LOC100653049A0A140TA62 436 aa15.28■□□□□ 0.04
SEC13-218ENST00000490283 LOC102725191A0A1B0GVB3 256 aa15.28■□□□□ 0.04
SEC13-218ENST00000490283 TRAPPC13A5PLN9 417 aa15.28■□□□□ 0.04
SEC13-218ENST00000490283 OVOL3O00110 214 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms