RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 CHRDL1Q9BU40 450 aa2.56□□□□□ -2
CD46-216ENST00000490278 LRRC40Q9H9A6 602 aa2.56□□□□□ -2
CD46-216ENST00000490278 SIAEQ9HAT2 523 aa2.56□□□□□ -2
CD46-216ENST00000490278 QPCTLQ9NXS2 382 aa2.56□□□□□ -2
CD46-216ENST00000490278 NUFIP1Q9UHK0 495 aaKnown RBP2.56□□□□□ -2
CD46-216ENST00000490278 KCNIP3Q9Y2W7 256 aa2.56□□□□□ -2
CD46-216ENST00000490278 SLC25A15Q9Y619 301 aa2.56□□□□□ -2
CD46-216ENST00000490278 A0A0G2JLM5 398 aa2.55□□□□□ -2
CD46-216ENST00000490278 RBMY1BA6NDE4 496 aaKnown RBP2.55□□□□□ -2
CD46-216ENST00000490278 A6NDX4 124 aa2.55□□□□□ -2
CD46-216ENST00000490278 RBMY1EA6NEQ0 496 aaKnown RBP2.55□□□□□ -2
CD46-216ENST00000490278 CCDC182A6NF36 153 aa2.55□□□□□ -2
CD46-216ENST00000490278 OR5B21A6NL26 309 aa2.55□□□□□ -2
CD46-216ENST00000490278 SNTNA6NMZ2 147 aa2.55□□□□□ -2
CD46-216ENST00000490278 GOLGA8SH3BPF8 625 aa2.55□□□□□ -2
CD46-216ENST00000490278 TIMM8AO60220 97 aaPredicted RBP2.55□□□□□ -2
CD46-216ENST00000490278 TNFSF13O75888 250 aa2.55□□□□□ -2
CD46-216ENST00000490278 RBMY1DP0C7P1 496 aaKnown RBP2.55□□□□□ -2
CD46-216ENST00000490278 RBMY1A1P0DJD3 496 aaKnown RBP2.55□□□□□ -2
CD46-216ENST00000490278 CRISP2P16562 243 aa2.55□□□□□ -2
CD46-216ENST00000490278 TBPP20226 339 aa2.55□□□□□ -2
CD46-216ENST00000490278 CCNCP24863 283 aa2.55□□□□□ -2
CD46-216ENST00000490278 RPS10P46783 165 aaKnown RBP2.55□□□□□ -2
CD46-216ENST00000490278 MECOMQ03112 1051 aa2.55□□□□□ -2
CD46-216ENST00000490278 RLFQ13129 1914 aa2.55□□□□□ -2
CD46-216ENST00000490278 LTBP1Q14766 1721 aa2.55□□□□□ -2
CD46-216ENST00000490278 GPNMBQ14956 572 aa2.55□□□□□ -2
CD46-216ENST00000490278 CYTH1Q15438 398 aa2.55□□□□□ -2
CD46-216ENST00000490278 CENPPQ6IPU0 288 aa2.55□□□□□ -2
CD46-216ENST00000490278 COX15Q7KZN9 410 aa2.55□□□□□ -2
CD46-216ENST00000490278 EFL1Q7Z2Z2 1120 aaKnown RBP2.55□□□□□ -2
CD46-216ENST00000490278 ZNF546Q86UE3 836 aa2.55□□□□□ -2
CD46-216ENST00000490278 NUDCD3Q8IVD9 361 aa2.55□□□□□ -2
CD46-216ENST00000490278 TMEM61Q8N0U2 210 aa2.55□□□□□ -2
CD46-216ENST00000490278 EIF1ADQ8N9N8 165 aaKnown RBP2.55□□□□□ -2
CD46-216ENST00000490278 Q8N9W7 124 aa2.55□□□□□ -2
CD46-216ENST00000490278 BHLHE23Q8NDY6 225 aa2.55□□□□□ -2
CD46-216ENST00000490278 OR6X1Q8NH79 312 aa2.55□□□□□ -2
CD46-216ENST00000490278 ZNF641Q96N77 438 aaPredicted RBP2.55□□□□□ -2
CD46-216ENST00000490278 ZNF285Q96NJ3 590 aa2.55□□□□□ -2
CD46-216ENST00000490278 SDHCQ99643 169 aaPredicted RBP2.55□□□□□ -2
CD46-216ENST00000490278 RIOK1Q9BRS2 568 aaKnown RBP2.55□□□□□ -2
CD46-216ENST00000490278 SLC25A39Q9BZJ4 359 aaPredicted RBP2.55□□□□□ -2
CD46-216ENST00000490278 GBA3Q9H227 469 aa2.55□□□□□ -2
CD46-216ENST00000490278 RANBP3Q9H6Z4 567 aaPredicted RBP2.55□□□□□ -2
CD46-216ENST00000490278 EML4Q9HC35 981 aaKnown RBP2.55□□□□□ -2
CD46-216ENST00000490278 GLRX2Q9NS18 164 aa2.55□□□□□ -2
CD46-216ENST00000490278 FANCIQ9NVI1 1328 aa2.55□□□□□ -2
CD46-216ENST00000490278 GIN1Q9NXP7 522 aa2.55□□□□□ -2
CD46-216ENST00000490278 EXTL2Q9UBQ6 330 aa2.55□□□□□ -2
CD46-216ENST00000490278 PIGLQ9Y2B2 252 aa2.55□□□□□ -2
CD46-216ENST00000490278 TP53TG5Q9Y2B4 290 aa2.55□□□□□ -2
CD46-216ENST00000490278 CDC42BPBQ9Y5S2 1711 aa2.55□□□□□ -2
CD46-216ENST00000490278 ATAD2BQ9ULI0 1458 aa2.54□□□□□ -2
CD46-216ENST00000490278 TRBV6-6A0A0A6YYG2 114 aa2.54□□□□□ -2
CD46-216ENST00000490278 A0A0G2JN53 185 aa2.54□□□□□ -2
CD46-216ENST00000490278 CLRN2A0PK11 232 aa2.54□□□□□ -2
CD46-216ENST00000490278 NKX2-6A6NCS4 301 aa2.54□□□□□ -2
CD46-216ENST00000490278 FAM166BA8MTA8 275 aa2.54□□□□□ -2
CD46-216ENST00000490278 C12orf77C9JDV5 145 aa2.54□□□□□ -2
CD46-216ENST00000490278 SURF6O75683 361 aaKnown RBP2.54□□□□□ -2
CD46-216ENST00000490278 TSPAN12O95859 305 aa2.54□□□□□ -2
CD46-216ENST00000490278 MOSP00540 346 aa2.54□□□□□ -2
CD46-216ENST00000490278 MMP1P03956 469 aa2.54□□□□□ -2
CD46-216ENST00000490278 HOXC4P09017 264 aaPredicted RBP2.54□□□□□ -2
CD46-216ENST00000490278 TOP1P11387 765 aaKnown RBP2.54□□□□□ -2
CD46-216ENST00000490278 UCNP55089 124 aa2.54□□□□□ -2
CD46-216ENST00000490278 OGDHQ02218 1023 aa2.54□□□□□ -2
CD46-216ENST00000490278 C1orf94Q6P1W5 598 aa2.54□□□□□ -2
CD46-216ENST00000490278 ENPP6Q6UWR7 440 aa2.54□□□□□ -2
CD46-216ENST00000490278 ZNF429Q86V71 674 aa2.54□□□□□ -2
CD46-216ENST00000490278 PLA2G4DQ86XP0 818 aa2.54□□□□□ -2
CD46-216ENST00000490278 ENTHD1Q8IYW4 607 aa2.54□□□□□ -2
CD46-216ENST00000490278 ARIH2OSQ8N7S6 290 aa2.54□□□□□ -2
CD46-216ENST00000490278 Q8N9L7 120 aa2.54□□□□□ -2
CD46-216ENST00000490278 ACOT11Q8WXI4 607 aaPredicted RBP2.54□□□□□ -2
CD46-216ENST00000490278 RIOK2Q9BVS4 552 aaKnown RBP2.54□□□□□ -2
CD46-216ENST00000490278 DEFB127Q9H1M4 99 aa2.54□□□□□ -2
CD46-216ENST00000490278 AZI2Q9H6S1 392 aa2.54□□□□□ -2
CD46-216ENST00000490278 CCL28Q9NRJ3 127 aa2.54□□□□□ -2
CD46-216ENST00000490278 CLCF1Q9UBD9 225 aa2.54□□□□□ -2
CD46-216ENST00000490278 MMP17Q9ULZ9 603 aa2.54□□□□□ -2
CD46-216ENST00000490278 PRG3Q9Y2Y8 225 aaPredicted RBP2.54□□□□□ -2
CD46-216ENST00000490278 PDS5BQ9NTI5 1447 aa2.53□□□□□ -2
CD46-216ENST00000490278 IGKV6D-21A0A0A0MT36 114 aa2.53□□□□□ -2
CD46-216ENST00000490278 A0A1B0GVL5 298 aa2.53□□□□□ -2
CD46-216ENST00000490278 C12orf71A8MTZ7 269 aa2.53□□□□□ -2
CD46-216ENST00000490278 CXCL11O14625 94 aa2.53□□□□□ -2
CD46-216ENST00000490278 FCMRO60667 390 aa2.53□□□□□ -2
CD46-216ENST00000490278 TOM1O60784 492 aa2.53□□□□□ -2
CD46-216ENST00000490278 TDGF1P13385 188 aa2.53□□□□□ -2
CD46-216ENST00000490278 HPGDP15428 266 aa2.53□□□□□ -2
CD46-216ENST00000490278 BTCP35070 178 aa2.53□□□□□ -2
CD46-216ENST00000490278 EPS15P42566 896 aa2.53□□□□□ -2
CD46-216ENST00000490278 LHX2P50458 406 aa2.53□□□□□ -2
CD46-216ENST00000490278 TDGF1P3P51864 188 aa2.53□□□□□ -2
CD46-216ENST00000490278 ERVK-25P63136 954 aa2.53□□□□□ -2
CD46-216ENST00000490278 SCRN3Q0VDG4 424 aa2.53□□□□□ -2
CD46-216ENST00000490278 KIAA0087Q14695 138 aa2.53□□□□□ -2
CD46-216ENST00000490278 GNMTQ14749 295 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms