RNA–Protein interactions for RNA: ENST00000490231.5

NUP58-213, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-213ENST00000490231 OR4A8P0C604 315 aa13.62□□□□□ -0.23
NUP58-213ENST00000490231 CECR9P0C854 216 aa13.62□□□□□ -0.23
NUP58-213ENST00000490231 PNMTP11086 282 aa13.62□□□□□ -0.23
NUP58-213ENST00000490231 IGFBP5P24593 272 aa13.62□□□□□ -0.23
NUP58-213ENST00000490231 PPOXP50336 477 aa13.62□□□□□ -0.23
NUP58-213ENST00000490231 WDR4P57081 412 aaKnown RBP13.62□□□□□ -0.23
NUP58-213ENST00000490231 RPS26P11Q5JNZ5 115 aaPredicted RBP13.62□□□□□ -0.23
NUP58-213ENST00000490231 NXNQ6DKJ4 435 aa13.62□□□□□ -0.23
NUP58-213ENST00000490231 ARIH2OSQ8N7S6 290 aa13.62□□□□□ -0.23
NUP58-213ENST00000490231 ANKRD42Q8N9B4 389 aa13.62□□□□□ -0.23
NUP58-213ENST00000490231 ZNF540Q8NDQ6 660 aa13.62□□□□□ -0.23
NUP58-213ENST00000490231 NUP37Q8NFH4 326 aa13.62□□□□□ -0.23
NUP58-213ENST00000490231 OR4F15Q8NGB8 312 aa13.62□□□□□ -0.23
NUP58-213ENST00000490231 VPS33AQ96AX1 596 aa13.62□□□□□ -0.23
NUP58-213ENST00000490231 MSI2Q96DH6 328 aaKnown RBP13.62□□□□□ -0.23
NUP58-213ENST00000490231 VRK1Q99986 396 aaPredicted RBP13.62□□□□□ -0.23
NUP58-213ENST00000490231 PTDSS2Q9BVG9 487 aa13.62□□□□□ -0.23
NUP58-213ENST00000490231 BCL2L10Q9HD36 194 aa13.62□□□□□ -0.23
NUP58-213ENST00000490231 SDR39U1Q9NRG7 319 aaPredicted RBP13.62□□□□□ -0.23
NUP58-213ENST00000490231 A0A096LPE4 126 aa13.61□□□□□ -0.23
NUP58-213ENST00000490231 LOC100289279A0A1B0GTE1 492 aa13.61□□□□□ -0.23
NUP58-213ENST00000490231 A0A1W2PPZ6 126 aa13.61□□□□□ -0.23
NUP58-213ENST00000490231 ZNF432O94892 652 aa13.61□□□□□ -0.23
NUP58-213ENST00000490231 KITP10721 976 aa13.61□□□□□ -0.23
NUP58-213ENST00000490231 APEHP13798 732 aaKnown RBP13.61□□□□□ -0.23
NUP58-213ENST00000490231 ZNF43P17038 809 aa13.61□□□□□ -0.23
NUP58-213ENST00000490231 SRD5A1P18405 259 aa13.61□□□□□ -0.23
NUP58-213ENST00000490231 CALCRP30988 508 aa13.61□□□□□ -0.23
NUP58-213ENST00000490231 ROR2Q01974 943 aaKnown RBP13.61□□□□□ -0.23
NUP58-213ENST00000490231 EGR4Q05215 589 aa13.61□□□□□ -0.23
NUP58-213ENST00000490231 KRTAP24-1Q3LI83 254 aa13.61□□□□□ -0.23
NUP58-213ENST00000490231 GTDC1Q4AE62 458 aa13.61□□□□□ -0.23
NUP58-213ENST00000490231 ZNF311Q5JNZ3 666 aa13.61□□□□□ -0.23
NUP58-213ENST00000490231 ATG16L1Q676U5 607 aa13.61□□□□□ -0.23
NUP58-213ENST00000490231 ANKS4BQ8N8V4 417 aa13.61□□□□□ -0.23
NUP58-213ENST00000490231 SLC25A36Q96CQ1 311 aa13.61□□□□□ -0.23
NUP58-213ENST00000490231 FOXN4Q96NZ1 517 aa13.61□□□□□ -0.23
NUP58-213ENST00000490231 ZNF442Q9H7R0 627 aa13.61□□□□□ -0.23
NUP58-213ENST00000490231 C12orf10Q9HB07 376 aa13.61□□□□□ -0.23
NUP58-213ENST00000490231 IGHV4-61A0A0C4DH41 118 aa13.6□□□□□ -0.23
NUP58-213ENST00000490231 TMEM120BA0PK00 339 aa13.6□□□□□ -0.23
NUP58-213ENST00000490231 SLC35F4A4IF30 521 aa13.6□□□□□ -0.23
NUP58-213ENST00000490231 OR2T1O43869 369 aa13.6□□□□□ -0.23
NUP58-213ENST00000490231 SLC43A1O75387 559 aa13.6□□□□□ -0.23
NUP58-213ENST00000490231 BMP2P12643 396 aa13.6□□□□□ -0.23
NUP58-213ENST00000490231 CBR1P16152 277 aa13.6□□□□□ -0.23
NUP58-213ENST00000490231 ZNF23P17027 643 aa13.6□□□□□ -0.23
NUP58-213ENST00000490231 GTF2E2P29084 291 aaKnown RBP13.6□□□□□ -0.23
NUP58-213ENST00000490231 RPS5P46782 204 aaKnown RBP13.6□□□□□ -0.23
NUP58-213ENST00000490231 IDH3GP51553 393 aaPredicted RBP13.6□□□□□ -0.23
NUP58-213ENST00000490231 POLR2JP52435 117 aaKnown RBP13.6□□□□□ -0.23
NUP58-213ENST00000490231 CLDN17P56750 224 aa13.6□□□□□ -0.23
NUP58-213ENST00000490231 TUBA1BP68363 451 aa13.6□□□□□ -0.23
NUP58-213ENST00000490231 TUBA4AP68366 448 aa13.6□□□□□ -0.23
NUP58-213ENST00000490231 RGNQ15493 299 aa13.6□□□□□ -0.23
NUP58-213ENST00000490231 CARTPTQ16568 116 aa13.6□□□□□ -0.23
NUP58-213ENST00000490231 SLC9B1Q4ZJI4 515 aa13.6□□□□□ -0.23
NUP58-213ENST00000490231 C6orf10Q5SRN2 563 aa13.6□□□□□ -0.23
NUP58-213ENST00000490231 FAM120AOSQ5T036 256 aa13.6□□□□□ -0.23
NUP58-213ENST00000490231 C5orf46Q6UWT4 87 aa13.6□□□□□ -0.23
NUP58-213ENST00000490231 C6orf89Q6UWU4 347 aa13.6□□□□□ -0.23
NUP58-213ENST00000490231 TUBA1AQ71U36 451 aa13.6□□□□□ -0.23
NUP58-213ENST00000490231 KDM8Q8N371 416 aa13.6□□□□□ -0.23
NUP58-213ENST00000490231 BBS10Q8TAM1 723 aa13.6□□□□□ -0.23
NUP58-213ENST00000490231 KTI12Q96EK9 354 aaPredicted RBP13.6□□□□□ -0.23
NUP58-213ENST00000490231 OXGR1Q96P68 337 aa13.6□□□□□ -0.23
NUP58-213ENST00000490231 RAB1BQ9H0U4 201 aa13.6□□□□□ -0.23
NUP58-213ENST00000490231 RAD21L1Q9H4I0 556 aa13.6□□□□□ -0.23
NUP58-213ENST00000490231 CHODLQ9H9P2 273 aa13.6□□□□□ -0.23
NUP58-213ENST00000490231 A4GALTQ9NPC4 353 aa13.6□□□□□ -0.23
NUP58-213ENST00000490231 B3GAT1Q9P2W7 334 aa13.6□□□□□ -0.23
NUP58-213ENST00000490231 RAB21Q9UL25 225 aa13.6□□□□□ -0.23
NUP58-213ENST00000490231 SVEP1Q4LDE5 3571 aa13.59□□□□□ -0.23
NUP58-213ENST00000490231 VSTM5A8MXK1 200 aa13.59□□□□□ -0.23
NUP58-213ENST00000490231 AIM2O14862 343 aa13.59□□□□□ -0.23
NUP58-213ENST00000490231 UBDO15205 165 aa13.59□□□□□ -0.23
NUP58-213ENST00000490231 HNF1AP20823 631 aa13.59□□□□□ -0.23
NUP58-213ENST00000490231 SLC18A1P54219 525 aa13.59□□□□□ -0.23
NUP58-213ENST00000490231 ARF1P84077 181 aaKnown RBP13.59□□□□□ -0.23
NUP58-213ENST00000490231 HGFACQ04756 655 aa13.59□□□□□ -0.23
NUP58-213ENST00000490231 FADDQ13158 208 aa13.59□□□□□ -0.23
NUP58-213ENST00000490231 IQCCQ4KMZ1 466 aa13.59□□□□□ -0.23
NUP58-213ENST00000490231 FAM69AQ5T7M9 428 aa13.59□□□□□ -0.23
NUP58-213ENST00000490231 VHLLQ6RSH7 139 aa13.59□□□□□ -0.23
NUP58-213ENST00000490231 CCDC36Q8IYA8 594 aa13.59□□□□□ -0.23
NUP58-213ENST00000490231 LSMEM1Q8N8F7 131 aa13.59□□□□□ -0.23
NUP58-213ENST00000490231 GTF2H4Q92759 462 aa13.59□□□□□ -0.23
NUP58-213ENST00000490231 BPESC1Q9GZL8 116 aa13.59□□□□□ -0.23
NUP58-213ENST00000490231 PAIP1Q9H074 479 aaKnown RBP13.59□□□□□ -0.23
NUP58-213ENST00000490231 SEC61A2Q9H9S3 476 aa13.59□□□□□ -0.23
NUP58-213ENST00000490231 GPR35Q9HC97 309 aa13.59□□□□□ -0.23
NUP58-213ENST00000490231 PCDHB14Q9Y5E9 798 aa13.59□□□□□ -0.23
NUP58-213ENST00000490231 ALPK2Q86TB3 2170 aa13.58□□□□□ -0.24
NUP58-213ENST00000490231 LOC102725191A0A1B0GVB3 256 aa13.58□□□□□ -0.24
NUP58-213ENST00000490231 CLIC1O00299 241 aa13.58□□□□□ -0.24
NUP58-213ENST00000490231 AKAP8O43823 692 aaKnown RBP13.58□□□□□ -0.24
NUP58-213ENST00000490231 STAMBPO95630 424 aa13.58□□□□□ -0.24
NUP58-213ENST00000490231 ERCC1P07992 297 aaPredicted RBP13.58□□□□□ -0.24
NUP58-213ENST00000490231 NUDT7P0C024 238 aa13.58□□□□□ -0.24
NUP58-213ENST00000490231 ETS2P15036 469 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms