RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 TAMM41Q96BW9 452 aa17.34■□□□□ 0.37
SMC4-222ENST00000490207 LRRC58Q96CX6 371 aa17.34■□□□□ 0.37
SMC4-222ENST00000490207 Q96MF0 132 aa17.34■□□□□ 0.37
SMC4-222ENST00000490207 ALKBH3Q96Q83 286 aaPredicted RBP17.34■□□□□ 0.37
SMC4-222ENST00000490207 SH3GL1Q99961 368 aa17.34■□□□□ 0.37
SMC4-222ENST00000490207 SLC17A5Q9NRA2 495 aa17.34■□□□□ 0.37
SMC4-222ENST00000490207 B3GAT1Q9P2W7 334 aa17.34■□□□□ 0.37
SMC4-222ENST00000490207 CAPN7Q9Y6W3 813 aa17.34■□□□□ 0.37
SMC4-222ENST00000490207 CADP27708 2225 aa17.33■□□□□ 0.37
SMC4-222ENST00000490207 OR6C65A6NJZ3 312 aa17.33■□□□□ 0.36
SMC4-222ENST00000490207 SHISA9B4DS77 424 aa17.33■□□□□ 0.36
SMC4-222ENST00000490207 ZNF587BE7ETH6 402 aa17.33■□□□□ 0.36
SMC4-222ENST00000490207 M0R1B8 84 aa17.33■□□□□ 0.36
SMC4-222ENST00000490207 SOD3P08294 240 aa17.33■□□□□ 0.36
SMC4-222ENST00000490207 CD247P20963 164 aa17.33■□□□□ 0.36
SMC4-222ENST00000490207 CBLP22681 906 aa17.33■□□□□ 0.36
SMC4-222ENST00000490207 PTAFRP25105 342 aa17.33■□□□□ 0.36
SMC4-222ENST00000490207 CDH12P55289 794 aa17.33■□□□□ 0.36
SMC4-222ENST00000490207 SLC25A3Q00325 362 aa17.33■□□□□ 0.36
SMC4-222ENST00000490207 IL1RL1Q01638 556 aa17.33■□□□□ 0.36
SMC4-222ENST00000490207 LGALS3BPQ08380 585 aa17.33■□□□□ 0.36
SMC4-222ENST00000490207 MFSD13AQ14CX5 517 aa17.33■□□□□ 0.36
SMC4-222ENST00000490207 NPTX1Q15818 432 aa17.33■□□□□ 0.36
SMC4-222ENST00000490207 ZNF613Q6PF04 617 aa17.33■□□□□ 0.36
SMC4-222ENST00000490207 WDR31Q8NA23 367 aa17.33■□□□□ 0.36
SMC4-222ENST00000490207 ADPRHL1Q8NDY3 354 aa17.33■□□□□ 0.36
SMC4-222ENST00000490207 OR6T1Q8NGN1 323 aa17.33■□□□□ 0.36
SMC4-222ENST00000490207 OR6S1Q8NH40 331 aa17.33■□□□□ 0.36
SMC4-222ENST00000490207 VANGL1Q8TAA9 524 aaPredicted RBP17.33■□□□□ 0.36
SMC4-222ENST00000490207 SMAP2Q8WU79 429 aaPredicted RBP17.33■□□□□ 0.36
SMC4-222ENST00000490207 C10orf82Q8WW14 230 aa17.33■□□□□ 0.36
SMC4-222ENST00000490207 OXGR1Q96P68 337 aa17.33■□□□□ 0.36
SMC4-222ENST00000490207 ECSITQ9BQ95 431 aa17.33■□□□□ 0.36
SMC4-222ENST00000490207 ZNF701Q9NV72 531 aaPredicted RBP17.33■□□□□ 0.36
SMC4-222ENST00000490207 MGAT4BQ9UQ53 548 aa17.33■□□□□ 0.36
SMC4-222ENST00000490207 RCE1Q9Y256 329 aa17.33■□□□□ 0.36
SMC4-222ENST00000490207 B3GALT5Q9Y2C3 310 aa17.33■□□□□ 0.36
SMC4-222ENST00000490207 MAGED1Q9Y5V3 778 aaPredicted RBP17.33■□□□□ 0.36
SMC4-222ENST00000490207 ACANP16112 2415 aa17.32■□□□□ 0.36
SMC4-222ENST00000490207 CPSF4LA6NMK7 179 aaKnown RBP17.32■□□□□ 0.36
SMC4-222ENST00000490207 CHP2O43745 196 aa17.32■□□□□ 0.36
SMC4-222ENST00000490207 NPPAP01160 153 aa17.32■□□□□ 0.36
SMC4-222ENST00000490207 BGLAPP02818 100 aa17.32■□□□□ 0.36
SMC4-222ENST00000490207 DANCRP0C864 163 aa17.32■□□□□ 0.36
SMC4-222ENST00000490207 CDH2P19022 906 aaPredicted RBP17.32■□□□□ 0.36
SMC4-222ENST00000490207 CD40P25942 277 aa17.32■□□□□ 0.36
SMC4-222ENST00000490207 MDH1P40925 334 aaKnown RBP17.32■□□□□ 0.36
SMC4-222ENST00000490207 SPOCK1Q08629 439 aa17.32■□□□□ 0.36
SMC4-222ENST00000490207 C1DQ13901 141 aaKnown RBP17.32■□□□□ 0.36
SMC4-222ENST00000490207 ENTPD8Q5MY95 495 aa17.32■□□□□ 0.36
SMC4-222ENST00000490207 H1FNTQ75WM6 255 aaPredicted RBP17.32■□□□□ 0.36
SMC4-222ENST00000490207 CALHM3Q86XJ0 350 aa17.32■□□□□ 0.36
SMC4-222ENST00000490207 PCYOX1LQ8NBM8 494 aa17.32■□□□□ 0.36
SMC4-222ENST00000490207 OR4D11Q8NGI4 311 aa17.32■□□□□ 0.36
SMC4-222ENST00000490207 RASSF5Q8WWW0 418 aa17.32■□□□□ 0.36
SMC4-222ENST00000490207 RADILQ96JH8 1075 aa17.32■□□□□ 0.36
SMC4-222ENST00000490207 C18orf12Q96KH6 178 aa17.32■□□□□ 0.36
SMC4-222ENST00000490207 TMEM43Q9BTV4 400 aa17.32■□□□□ 0.36
SMC4-222ENST00000490207 CISD1Q9NZ45 108 aaKnown RBP17.32■□□□□ 0.36
SMC4-222ENST00000490207 CORINQ9Y5Q5 1042 aa17.32■□□□□ 0.36
SMC4-222ENST00000490207 LOC100653049A0A140TA62 436 aa17.31■□□□□ 0.36
SMC4-222ENST00000490207 SLC22A2O15244 555 aa17.31■□□□□ 0.36
SMC4-222ENST00000490207 AKAP8O43823 692 aaKnown RBP17.31■□□□□ 0.36
SMC4-222ENST00000490207 KRT34O76011 436 aa17.31■□□□□ 0.36
SMC4-222ENST00000490207 WNT11O96014 354 aa17.31■□□□□ 0.36
SMC4-222ENST00000490207 NQO1P15559 274 aaKnown RBP17.31■□□□□ 0.36
SMC4-222ENST00000490207 ATP5J2P56134 94 aa17.31■□□□□ 0.36
SMC4-222ENST00000490207 PGGHGQ32M88 737 aa17.31■□□□□ 0.36
SMC4-222ENST00000490207 HIKESHIQ53FT3 197 aa17.31■□□□□ 0.36
SMC4-222ENST00000490207 C1QTNF12Q5T7M4 302 aa17.31■□□□□ 0.36
SMC4-222ENST00000490207 CCDC80Q76M96 950 aa17.31■□□□□ 0.36
SMC4-222ENST00000490207 SCAIQ8N9R8 606 aa17.31■□□□□ 0.36
SMC4-222ENST00000490207 OR1K1Q8NGR3 316 aa17.31■□□□□ 0.36
SMC4-222ENST00000490207 C1QTNF6Q9BXI9 259 aa17.31■□□□□ 0.36
SMC4-222ENST00000490207 ASPNQ9BXN1 380 aa17.31■□□□□ 0.36
SMC4-222ENST00000490207 LINC00470Q9BZP3 86 aa17.31■□□□□ 0.36
SMC4-222ENST00000490207 GSX1Q9H4S2 264 aaPredicted RBP17.31■□□□□ 0.36
SMC4-222ENST00000490207 FAIMQ9NVQ4 179 aa17.31■□□□□ 0.36
SMC4-222ENST00000490207 GID8Q9NWU2 228 aa17.31■□□□□ 0.36
SMC4-222ENST00000490207 TRAF3IP2O43734 574 aaPredicted RBP17.3■□□□□ 0.36
SMC4-222ENST00000490207 SLC43A1O75387 559 aa17.3■□□□□ 0.36
SMC4-222ENST00000490207 UPK3AO75631 287 aa17.3■□□□□ 0.36
SMC4-222ENST00000490207 CRYBA2P53672 197 aa17.3■□□□□ 0.36
SMC4-222ENST00000490207 PRPS1P60891 318 aa17.3■□□□□ 0.36
SMC4-222ENST00000490207 LTBQ06643 244 aa17.3■□□□□ 0.36
SMC4-222ENST00000490207 ERICH5Q6P6B1 374 aa17.3■□□□□ 0.36
SMC4-222ENST00000490207 SLC22A25Q6T423 547 aa17.3■□□□□ 0.36
SMC4-222ENST00000490207 LINGO2Q7L985 606 aa17.3■□□□□ 0.36
SMC4-222ENST00000490207 BIVMQ86UB2 503 aa17.3■□□□□ 0.36
SMC4-222ENST00000490207 RBM45Q8IUH3 476 aaKnown RBP17.3■□□□□ 0.36
SMC4-222ENST00000490207 UEVLDQ8IX04 471 aa17.3■□□□□ 0.36
SMC4-222ENST00000490207 C10orf53Q8N6V4 93 aa17.3■□□□□ 0.36
SMC4-222ENST00000490207 ADAMTS16Q8TE57 1224 aa17.3■□□□□ 0.36
SMC4-222ENST00000490207 GTPBP3Q969Y2 492 aaKnown RBP17.3■□□□□ 0.36
SMC4-222ENST00000490207 SLC41A3Q96GZ6 507 aa17.3■□□□□ 0.36
SMC4-222ENST00000490207 MOGAT1Q96PD6 335 aa17.3■□□□□ 0.36
SMC4-222ENST00000490207 ZNF317Q96PQ6 595 aaPredicted RBP17.3■□□□□ 0.36
SMC4-222ENST00000490207 ALG2Q9H553 416 aa17.3■□□□□ 0.36
SMC4-222ENST00000490207 ARMCX1Q9P291 453 aa17.3■□□□□ 0.36
SMC4-222ENST00000490207 POU2F3Q9UKI9 436 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms