RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 RDH8Q9NYR8 311 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 TAS2R1Q9NYW7 299 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 RAB26Q9ULW5 256 aa2.49□□□□□ -2.01
UBXN4-208ENST00000490163 NID2Q14112 1375 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 BAZ2AQ9UIF9 1905 aaKnown RBP2.48□□□□□ -2.01
UBXN4-208ENST00000490163 A0A087WXM4 84 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 TRBV5-4A0A0C4DH59 114 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 TRPC5OSA6NMA1 111 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 MIF4GDA9UHW6 222 aaKnown RBP2.48□□□□□ -2.01
UBXN4-208ENST00000490163 RNASEK-C17orf49H0YIS7 233 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 TMEM178BH3BS89 294 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 K7EQG2 157 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 SLC22A1O15245 554 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 HDAC3O15379 428 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 ERI3O43414 337 aaKnown RBP2.48□□□□□ -2.01
UBXN4-208ENST00000490163 DENRO43583 198 aaKnown RBP2.48□□□□□ -2.01
UBXN4-208ENST00000490163 CLPXO76031 633 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 CD160O95971 181 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 IFNA16P05015 189 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 CALB1P05937 261 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 HOXC6P09630 235 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 SMIM10L1P0DMW3 83 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 FGF3P11487 239 aaPredicted RBP2.48□□□□□ -2.01
UBXN4-208ENST00000490163 CDH1P12830 882 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 SLC26A3P40879 764 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 BACE1P56817 501 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 OTUD4Q01804 1114 aaKnown RBP2.48□□□□□ -2.01
UBXN4-208ENST00000490163 OGDHQ02218 1023 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 TRAF2Q12933 501 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 SELENBP1Q13228 472 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 KLF5Q13887 457 aaPredicted RBP2.48□□□□□ -2.01
UBXN4-208ENST00000490163 PON2Q15165 354 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 TMED2Q15363 201 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 TEAD2Q15562 447 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 HLFQ16534 295 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 ZNF74Q16587 644 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 EXOC3L4Q17RC7 722 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 TTC27Q6P3X3 843 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 ZNF589Q86UQ0 364 aaPredicted RBP2.48□□□□□ -2.01
UBXN4-208ENST00000490163 STX12Q86Y82 276 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 SVOPLQ8N434 492 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 FBXL16Q8N461 479 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 C17orf78Q8N4C9 275 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 CCNYL1Q8N7R7 359 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 CLHC1Q8NHS4 586 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 FBXO25Q8TCJ0 367 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 C12orf43Q96C57 262 aaKnown RBP2.48□□□□□ -2.01
UBXN4-208ENST00000490163 RMND5BQ96G75 393 aaPredicted RBP2.48□□□□□ -2.01
UBXN4-208ENST00000490163 SMIM10Q96HG1 83 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 MROQ9BYG7 248 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 HOXD1Q9GZZ0 328 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 FBXO44Q9H4M3 255 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 EVA1AQ9H8M9 152 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 SPACA1Q9HBV2 294 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 ELOVL5Q9NYP7 299 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 ANAPC7Q9UJX3 599 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 MYRFQ9Y2G1 1151 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 OR2W1Q9Y3N9 320 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 TMED3Q9Y3Q3 217 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 CPQQ9Y646 472 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 HS3ST3B1Q9Y662 390 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 DNAJC9-AS1A6NH13 148 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 OR2AG2A6NM03 316 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 C12orf71A8MTZ7 269 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 CLDN25C9JDP6 229 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 F5H6K3 240 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 H0YL77 283 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 FGGP02679 453 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 CHRNGP07510 517 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 ALPIP09923 528 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 CYP2B6P20813 491 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 GPD1P21695 349 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 RRM2P31350 389 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 FOXN2P32314 431 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 PEX3P56589 373 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 S100A12P80511 92 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 IFITM2Q01629 132 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 ID2Q02363 134 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 GNA12Q03113 381 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 KLRC3Q07444 240 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 MERTKQ12866 999 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 NFATC2Q13469 925 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 OXA1LQ15070 435 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 CTF1Q16619 201 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 VMACQ2NL98 169 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 LSM12Q3MHD2 195 aaKnown RBP2.48□□□□□ -2.01
UBXN4-208ENST00000490163 GLYR1Q49A26 553 aaPredicted RBP2.48□□□□□ -2.01
UBXN4-208ENST00000490163 TNFAIP8L3Q5GJ75 292 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 UBE2UQ5VVX9 321 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 MOB2Q70IA6 237 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 SETD3Q86TU7 594 aaPredicted RBP2.48□□□□□ -2.01
UBXN4-208ENST00000490163 HORMAD1Q86X24 394 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 FAM58AQ8N1B3 248 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 PGBD5Q8N414 524 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 LRTM2Q8N967 370 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 SNX31Q8N9S9 440 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 OR1J1Q8NGS3 322 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 RFT1Q96AA3 541 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 ISOC1Q96CN7 298 aa2.48□□□□□ -2.01
UBXN4-208ENST00000490163 CCDC124Q96CT7 223 aaKnown RBP2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms