RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 DOK1Q99704 481 aa13.75□□□□□ -0.21
PLOD3-216ENST00000489927 ZNF442Q9H7R0 627 aa13.75□□□□□ -0.21
PLOD3-216ENST00000489927 MOV10Q9HCE1 1003 aaKnown RBP13.75□□□□□ -0.21
PLOD3-216ENST00000489927 SEC14L4Q9UDX3 406 aa13.75□□□□□ -0.21
PLOD3-216ENST00000489927 FBXO9Q9UK97 447 aaPredicted RBP13.75□□□□□ -0.21
PLOD3-216ENST00000489927 GPR45Q9Y5Y3 372 aa13.75□□□□□ -0.21
PLOD3-216ENST00000489927 ZNF503-AS2A6NEH8 195 aa13.74□□□□□ -0.21
PLOD3-216ENST00000489927 RFXANKO14593 260 aa13.74□□□□□ -0.21
PLOD3-216ENST00000489927 TM9SF1O15321 606 aa13.74□□□□□ -0.21
PLOD3-216ENST00000489927 ZNF432O94892 652 aa13.74□□□□□ -0.21
PLOD3-216ENST00000489927 TACSTD2P09758 323 aa13.74□□□□□ -0.21
PLOD3-216ENST00000489927 PNMTP11086 282 aa13.74□□□□□ -0.21
PLOD3-216ENST00000489927 HOXB1P14653 301 aaPredicted RBP13.74□□□□□ -0.21
PLOD3-216ENST00000489927 CBR1P16152 277 aa13.74□□□□□ -0.21
PLOD3-216ENST00000489927 NPR2P20594 1047 aa13.74□□□□□ -0.21
PLOD3-216ENST00000489927 CRATP43155 626 aa13.74□□□□□ -0.21
PLOD3-216ENST00000489927 CHN2P52757 468 aa13.74□□□□□ -0.21
PLOD3-216ENST00000489927 CRISP3P54108 245 aa13.74□□□□□ -0.21
PLOD3-216ENST00000489927 CLDN17P56750 224 aa13.74□□□□□ -0.21
PLOD3-216ENST00000489927 ARF1P84077 181 aaKnown RBP13.74□□□□□ -0.21
PLOD3-216ENST00000489927 STX3Q13277 289 aa13.74□□□□□ -0.21
PLOD3-216ENST00000489927 MPP2Q14168 576 aa13.74□□□□□ -0.21
PLOD3-216ENST00000489927 KRT71Q3SY84 523 aa13.74□□□□□ -0.21
PLOD3-216ENST00000489927 SPATA21Q7Z572 469 aa13.74□□□□□ -0.21
PLOD3-216ENST00000489927 MFSD8Q8NHS3 518 aa13.74□□□□□ -0.21
PLOD3-216ENST00000489927 STK35Q8TDR2 534 aa13.74□□□□□ -0.21
PLOD3-216ENST00000489927 NEU4Q8WWR8 484 aaPredicted RBP13.74□□□□□ -0.21
PLOD3-216ENST00000489927 SNX18Q96RF0 628 aa13.74□□□□□ -0.21
PLOD3-216ENST00000489927 ZBTB18Q99592 522 aa13.74□□□□□ -0.21
PLOD3-216ENST00000489927 PTDSS2Q9BVG9 487 aa13.74□□□□□ -0.21
PLOD3-216ENST00000489927 WDR55Q9H6Y2 383 aaPredicted RBP13.74□□□□□ -0.21
PLOD3-216ENST00000489927 SSU72Q9NP77 194 aaKnown RBP13.74□□□□□ -0.21
PLOD3-216ENST00000489927 CALML5Q9NZT1 146 aa13.74□□□□□ -0.21
PLOD3-216ENST00000489927 IGHV2OR16-5A0A0B4J2B6 119 aa13.73□□□□□ -0.21
PLOD3-216ENST00000489927 TMEM129A0AVI4 362 aa13.73□□□□□ -0.21
PLOD3-216ENST00000489927 RPL36A-HNRNPH2H7BZ11 118 aa13.73□□□□□ -0.21
PLOD3-216ENST00000489927 RGS16O15492 202 aaPredicted RBP13.73□□□□□ -0.21
PLOD3-216ENST00000489927 TCF21O43680 179 aa13.73□□□□□ -0.21
PLOD3-216ENST00000489927 AHSA1O95433 338 aa13.73□□□□□ -0.21
PLOD3-216ENST00000489927 ERCC1P07992 297 aaPredicted RBP13.73□□□□□ -0.21
PLOD3-216ENST00000489927 IGFBP1P08833 259 aaPredicted RBP13.73□□□□□ -0.21
PLOD3-216ENST00000489927 ZNF43P17038 809 aa13.73□□□□□ -0.21
PLOD3-216ENST00000489927 APEX1P27695 318 aaKnown RBP13.73□□□□□ -0.21
PLOD3-216ENST00000489927 RPS5P46782 204 aaKnown RBP13.73□□□□□ -0.21
PLOD3-216ENST00000489927 DSTNP60981 165 aa13.73□□□□□ -0.21
PLOD3-216ENST00000489927 EGR4Q05215 589 aa13.73□□□□□ -0.21
PLOD3-216ENST00000489927 BST1Q10588 318 aa13.73□□□□□ -0.21
PLOD3-216ENST00000489927 LARS2Q15031 903 aaKnown RBP13.73□□□□□ -0.21
PLOD3-216ENST00000489927 ATG16L1Q676U5 607 aa13.73□□□□□ -0.21
PLOD3-216ENST00000489927 ZNF786Q8N393 782 aa13.73□□□□□ -0.21
PLOD3-216ENST00000489927 RFLNBQ8N5W9 214 aa13.73□□□□□ -0.21
PLOD3-216ENST00000489927 LINC01356Q8N9X3 169 aa13.73□□□□□ -0.21
PLOD3-216ENST00000489927 ANKK1Q8NFD2 765 aa13.73□□□□□ -0.21
PLOD3-216ENST00000489927 HPS1Q92902 700 aa13.73□□□□□ -0.21
PLOD3-216ENST00000489927 ZNF837Q96EG3 531 aaPredicted RBP13.73□□□□□ -0.21
PLOD3-216ENST00000489927 ANKRD27Q96NW4 1050 aa13.73□□□□□ -0.21
PLOD3-216ENST00000489927 B3GAT1Q9P2W7 334 aa13.73□□□□□ -0.21
PLOD3-216ENST00000489927 TMEFF2Q9UIK5 374 aaPredicted RBP13.73□□□□□ -0.21
PLOD3-216ENST00000489927 RCE1Q9Y256 329 aa13.73□□□□□ -0.21
PLOD3-216ENST00000489927 SH3PXD2BA1X283 911 aa13.72□□□□□ -0.21
PLOD3-216ENST00000489927 VSTM5A8MXK1 200 aa13.72□□□□□ -0.21
PLOD3-216ENST00000489927 SLC43A1O75387 559 aa13.72□□□□□ -0.21
PLOD3-216ENST00000489927 EPHA3P29320 983 aa13.72□□□□□ -0.21
PLOD3-216ENST00000489927 HOXC5Q00444 222 aa13.72□□□□□ -0.21
PLOD3-216ENST00000489927 NPRL3Q12980 569 aa13.72□□□□□ -0.21
PLOD3-216ENST00000489927 RIN1Q13671 783 aa13.72□□□□□ -0.21
PLOD3-216ENST00000489927 TRIP10Q15642 601 aa13.72□□□□□ -0.21
PLOD3-216ENST00000489927 ADRM1Q16186 407 aa13.72□□□□□ -0.21
PLOD3-216ENST00000489927 CEACAM16Q2WEN9 425 aa13.72□□□□□ -0.21
PLOD3-216ENST00000489927 GTDC1Q4AE62 458 aa13.72□□□□□ -0.21
PLOD3-216ENST00000489927 CDK20Q8IZL9 346 aa13.72□□□□□ -0.21
PLOD3-216ENST00000489927 GLB1L3Q8NCI6 653 aaPredicted RBP13.72□□□□□ -0.21
PLOD3-216ENST00000489927 KTI12Q96EK9 354 aaPredicted RBP13.72□□□□□ -0.21
PLOD3-216ENST00000489927 TMEM19Q96HH6 336 aa13.72□□□□□ -0.21
PLOD3-216ENST00000489927 SPATA9Q9BWV2 254 aa13.72□□□□□ -0.21
PLOD3-216ENST00000489927 TPT1P8Q9HAU6 139 aa13.72□□□□□ -0.21
PLOD3-216ENST00000489927 CRLF2Q9HC73 371 aa13.72□□□□□ -0.21
PLOD3-216ENST00000489927 GPR35Q9HC97 309 aa13.72□□□□□ -0.21
PLOD3-216ENST00000489927 DYNLRB1Q9NP97 96 aa13.72□□□□□ -0.21
PLOD3-216ENST00000489927 ZNF232Q9UNY5 417 aa13.72□□□□□ -0.21
PLOD3-216ENST00000489927 A0A0G2JPF8 293 aa13.71□□□□□ -0.21
PLOD3-216ENST00000489927 HNRNPCL2B2RXH8 293 aa13.71□□□□□ -0.21
PLOD3-216ENST00000489927 HNRNPCL3B7ZW38 293 aa13.71□□□□□ -0.21
PLOD3-216ENST00000489927 LYNX1G3V0Z9 82 aa13.71□□□□□ -0.21
PLOD3-216ENST00000489927 HNRNPCL1O60812 293 aaKnown RBP13.71□□□□□ -0.21
PLOD3-216ENST00000489927 SEC14L2O76054 403 aa13.71□□□□□ -0.21
PLOD3-216ENST00000489927 IL6P05231 212 aa13.71□□□□□ -0.21
PLOD3-216ENST00000489927 ADRA2AP08913 450 aa13.71□□□□□ -0.21
PLOD3-216ENST00000489927 HNRNPCL4P0DMR1 293 aa13.71□□□□□ -0.21
PLOD3-216ENST00000489927 LYNX1P0DP58 116 aa13.71□□□□□ -0.21
PLOD3-216ENST00000489927 IFNGR1P15260 489 aa13.71□□□□□ -0.21
PLOD3-216ENST00000489927 ITGA2P17301 1181 aa13.71□□□□□ -0.21
PLOD3-216ENST00000489927 GTF2E2P29084 291 aaKnown RBP13.71□□□□□ -0.21
PLOD3-216ENST00000489927 ARR3P36575 388 aa13.71□□□□□ -0.21
PLOD3-216ENST00000489927 SRP14P37108 136 aaKnown RBP13.71□□□□□ -0.21
PLOD3-216ENST00000489927 CDH15P55291 814 aa13.71□□□□□ -0.21
PLOD3-216ENST00000489927 SNTB2Q13425 540 aaKnown RBP13.71□□□□□ -0.21
PLOD3-216ENST00000489927 DAG1Q14118 895 aa13.71□□□□□ -0.21
PLOD3-216ENST00000489927 ZNF311Q5JNZ3 666 aa13.71□□□□□ -0.21
PLOD3-216ENST00000489927 KRT80Q6KB66 452 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms