RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 ZNF546Q86UE3 836 aa2.84□□□□□ -1.95
CCDC39-206ENST00000489868 TMEM183AQ8IXX5 376 aa2.84□□□□□ -1.95
CCDC39-206ENST00000489868 OR2T34Q8NGX1 318 aa2.84□□□□□ -1.95
CCDC39-206ENST00000489868 TSNARE1Q96NA8 513 aa2.84□□□□□ -1.95
CCDC39-206ENST00000489868 TUBGCP2Q9BSJ2 902 aa2.84□□□□□ -1.95
CCDC39-206ENST00000489868 PALMDQ9NP74 551 aa2.84□□□□□ -1.95
CCDC39-206ENST00000489868 ZNF226Q9NYT6 803 aa2.84□□□□□ -1.95
CCDC39-206ENST00000489868 COPS3Q9UNS2 423 aa2.84□□□□□ -1.95
CCDC39-206ENST00000489868 PPIAL4EA0A075B759 164 aa2.83□□□□□ -1.96
CCDC39-206ENST00000489868 AP2A1O95782 977 aa2.83□□□□□ -1.96
CCDC39-206ENST00000489868 PPIAL4FP0DN26 164 aa2.83□□□□□ -1.96
CCDC39-206ENST00000489868 HNF1AP20823 631 aa2.83□□□□□ -1.96
CCDC39-206ENST00000489868 QARSP47897 775 aaKnown RBP2.83□□□□□ -1.96
CCDC39-206ENST00000489868 RFX4Q33E94 735 aa2.83□□□□□ -1.96
CCDC39-206ENST00000489868 FAM71E1Q6IPT2 247 aa2.83□□□□□ -1.96
CCDC39-206ENST00000489868 ZSCAN25Q6NSZ9 544 aa2.83□□□□□ -1.96
CCDC39-206ENST00000489868 CCDC80Q76M96 950 aa2.83□□□□□ -1.96
CCDC39-206ENST00000489868 NLRP9Q7RTR0 991 aa2.83□□□□□ -1.96
CCDC39-206ENST00000489868 THOC6Q86W42 341 aaKnown RBP2.83□□□□□ -1.96
CCDC39-206ENST00000489868 ANKFN1Q8N957 763 aa2.83□□□□□ -1.96
CCDC39-206ENST00000489868 OR10G9Q8NGN4 311 aa2.83□□□□□ -1.96
CCDC39-206ENST00000489868 ACOT11Q8WXI4 607 aaPredicted RBP2.83□□□□□ -1.96
CCDC39-206ENST00000489868 TM4SF19Q96DZ7 209 aa2.83□□□□□ -1.96
CCDC39-206ENST00000489868 DTNBP1Q96EV8 351 aa2.83□□□□□ -1.96
CCDC39-206ENST00000489868 RIOK2Q9BVS4 552 aaKnown RBP2.83□□□□□ -1.96
CCDC39-206ENST00000489868 LRRN3Q9H3W5 708 aa2.83□□□□□ -1.96
CCDC39-206ENST00000489868 FARSBQ9NSD9 589 aaKnown RBP2.83□□□□□ -1.96
CCDC39-206ENST00000489868 ANGPTL7O43827 346 aa2.82□□□□□ -1.96
CCDC39-206ENST00000489868 IQCF3P0C7M6 154 aa2.82□□□□□ -1.96
CCDC39-206ENST00000489868 POU2F1P14859 743 aa2.82□□□□□ -1.96
CCDC39-206ENST00000489868 ABOP16442 354 aa2.82□□□□□ -1.96
CCDC39-206ENST00000489868 HMGB2P26583 209 aaKnown RBP2.82□□□□□ -1.96
CCDC39-206ENST00000489868 ASPHQ12797 758 aa2.82□□□□□ -1.96
CCDC39-206ENST00000489868 OXA1LQ15070 435 aa2.82□□□□□ -1.96
CCDC39-206ENST00000489868 SGCAQ16586 387 aa2.82□□□□□ -1.96
CCDC39-206ENST00000489868 GUCA2BQ16661 112 aa2.82□□□□□ -1.96
CCDC39-206ENST00000489868 DUSP7Q16829 419 aa2.82□□□□□ -1.96
CCDC39-206ENST00000489868 CES3Q6UWW8 571 aa2.82□□□□□ -1.96
CCDC39-206ENST00000489868 HSDL2Q6YN16 418 aa2.82□□□□□ -1.96
CCDC39-206ENST00000489868 ZNF683Q8IZ20 524 aa2.82□□□□□ -1.96
CCDC39-206ENST00000489868 OR52H1Q8NGJ2 320 aa2.82□□□□□ -1.96
CCDC39-206ENST00000489868 EFHD2Q96C19 240 aaPredicted RBP2.82□□□□□ -1.96
CCDC39-206ENST00000489868 TPPP3Q9BW30 176 aa2.82□□□□□ -1.96
CCDC39-206ENST00000489868 SLC35D1Q9NTN3 355 aa2.82□□□□□ -1.96
CCDC39-206ENST00000489868 PIPOXQ9P0Z9 390 aa2.82□□□□□ -1.96
CCDC39-206ENST00000489868 OPN4Q9UHM6 478 aa2.82□□□□□ -1.96
CCDC39-206ENST00000489868 RPH3ALQ9UNE2 315 aa2.82□□□□□ -1.96
CCDC39-206ENST00000489868 GAKO14976 1311 aa2.82□□□□□ -1.96
CCDC39-206ENST00000489868 KIF26AQ9ULI4 1882 aaPredicted RBP2.82□□□□□ -1.96
CCDC39-206ENST00000489868 TCRBV9S1A1TA0A576 114 aa2.81□□□□□ -1.96
CCDC39-206ENST00000489868 PLAC8L1A1L4L8 177 aa2.81□□□□□ -1.96
CCDC39-206ENST00000489868 SPAG7O75391 227 aa2.81□□□□□ -1.96
CCDC39-206ENST00000489868 B3GALNT1O75752 331 aa2.81□□□□□ -1.96
CCDC39-206ENST00000489868 ATP5LO75964 103 aa2.81□□□□□ -1.96
CCDC39-206ENST00000489868 OXSR1O95747 527 aaPredicted RBP2.81□□□□□ -1.96
CCDC39-206ENST00000489868 KRT8P05787 483 aa2.81□□□□□ -1.96
CCDC39-206ENST00000489868 TBPP20226 339 aa2.81□□□□□ -1.96
CCDC39-206ENST00000489868 CHI3L1P36222 383 aaPredicted RBP2.81□□□□□ -1.96
CCDC39-206ENST00000489868 FGF8P55075 233 aaPredicted RBP2.81□□□□□ -1.96
CCDC39-206ENST00000489868 POLR2FP61218 127 aaKnown RBP2.81□□□□□ -1.96
CCDC39-206ENST00000489868 CBX1P83916 185 aa2.81□□□□□ -1.96
CCDC39-206ENST00000489868 TNFRSF17Q02223 184 aa2.81□□□□□ -1.96
CCDC39-206ENST00000489868 KLRB1Q12918 225 aa2.81□□□□□ -1.96
CCDC39-206ENST00000489868 PDIA2Q13087 525 aaKnown RBP2.81□□□□□ -1.96
CCDC39-206ENST00000489868 PDK4Q16654 411 aa2.81□□□□□ -1.96
CCDC39-206ENST00000489868 NADK2Q4G0N4 442 aa2.81□□□□□ -1.96
CCDC39-206ENST00000489868 LCN12Q6JVE5 192 aa2.81□□□□□ -1.96
CCDC39-206ENST00000489868 LYPD2Q6UXB3 125 aa2.81□□□□□ -1.96
CCDC39-206ENST00000489868 PCP2Q8IVA1 136 aa2.81□□□□□ -1.96
CCDC39-206ENST00000489868 MCOLN3Q8TDD5 553 aa2.81□□□□□ -1.96
CCDC39-206ENST00000489868 UFD1Q92890 307 aa2.81□□□□□ -1.96
CCDC39-206ENST00000489868 FGF14Q92915 247 aa2.81□□□□□ -1.96
CCDC39-206ENST00000489868 RAB34Q9BZG1 259 aa2.81□□□□□ -1.96
CCDC39-206ENST00000489868 RAB33BQ9H082 229 aa2.81□□□□□ -1.96
CCDC39-206ENST00000489868 SLCO1B3Q9NPD5 702 aa2.81□□□□□ -1.96
CCDC39-206ENST00000489868 UFSP2Q9NUQ7 469 aa2.81□□□□□ -1.96
CCDC39-206ENST00000489868 KIF3AQ9Y496 699 aa2.81□□□□□ -1.96
CCDC39-206ENST00000489868 F11RQ9Y624 299 aaKnown RBP2.81□□□□□ -1.96
CCDC39-206ENST00000489868 IGLV11-55A0A075B6I3 123 aa2.8□□□□□ -1.96
CCDC39-206ENST00000489868 METTL21EPA6NDL7 271 aa2.8□□□□□ -1.96
CCDC39-206ENST00000489868 C12orf71A8MTZ7 269 aa2.8□□□□□ -1.96
CCDC39-206ENST00000489868 PEX7O00628 323 aa2.8□□□□□ -1.96
CCDC39-206ENST00000489868 HSD17B6O14756 317 aa2.8□□□□□ -1.96
CCDC39-206ENST00000489868 SLC31A2O15432 143 aa2.8□□□□□ -1.96
CCDC39-206ENST00000489868 PRKAB2O43741 272 aa2.8□□□□□ -1.96
CCDC39-206ENST00000489868 DIRAS1O95057 198 aa2.8□□□□□ -1.96
CCDC39-206ENST00000489868 CD5P06127 495 aa2.8□□□□□ -1.96
CCDC39-206ENST00000489868 TLX1NBP0CAT3 122 aa2.8□□□□□ -1.96
CCDC39-206ENST00000489868 CNR1P21554 472 aa2.8□□□□□ -1.96
CCDC39-206ENST00000489868 SLC26A3P40879 764 aa2.8□□□□□ -1.96
CCDC39-206ENST00000489868 ACAA2P42765 397 aaKnown RBP2.8□□□□□ -1.96
CCDC39-206ENST00000489868 ENPEPQ07075 957 aa2.8□□□□□ -1.96
CCDC39-206ENST00000489868 FZD2Q14332 565 aa2.8□□□□□ -1.96
CCDC39-206ENST00000489868 DMRTC1Q5HYR2 192 aa2.8□□□□□ -1.96
CCDC39-206ENST00000489868 CCDC65Q8IXS2 484 aa2.8□□□□□ -1.96
CCDC39-206ENST00000489868 ZFP90Q8TF47 636 aa2.8□□□□□ -1.96
CCDC39-206ENST00000489868 IFI27L2Q9H2X8 130 aa2.8□□□□□ -1.96
CCDC39-206ENST00000489868 IL26Q9NPH9 171 aa2.8□□□□□ -1.96
CCDC39-206ENST00000489868 KCNIP1Q9NZI2 227 aa2.8□□□□□ -1.96
CCDC39-206ENST00000489868 RNF14Q9UBS8 474 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms