RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 RNF13O43567 381 aa19.47■□□□□ 0.71
SMC4-221ENST00000489573 RGS10O43665 173 aa19.47■□□□□ 0.71
SMC4-221ENST00000489573 MRPS14O60783 128 aaKnown RBP19.47■□□□□ 0.71
SMC4-221ENST00000489573 RFC3P40938 356 aa19.47■□□□□ 0.71
SMC4-221ENST00000489573 EIF2S3P41091 472 aaKnown RBP19.47■□□□□ 0.71
SMC4-221ENST00000489573 ZNF91Q05481 1191 aa19.47■□□□□ 0.71
SMC4-221ENST00000489573 PIGFQ07326 219 aa19.47■□□□□ 0.71
SMC4-221ENST00000489573 C19orf57Q0VDD7 668 aa19.47■□□□□ 0.71
SMC4-221ENST00000489573 WIPI1Q5MNZ9 446 aaPredicted RBP19.47■□□□□ 0.71
SMC4-221ENST00000489573 AADACL4Q5VUY2 407 aa19.47■□□□□ 0.71
SMC4-221ENST00000489573 NXNL2Q5VZ03 156 aa19.47■□□□□ 0.71
SMC4-221ENST00000489573 H1FNTQ75WM6 255 aaPredicted RBP19.47■□□□□ 0.71
SMC4-221ENST00000489573 CPOQ8IVL8 374 aa19.47■□□□□ 0.71
SMC4-221ENST00000489573 MYDGFQ969H8 173 aa19.47■□□□□ 0.71
SMC4-221ENST00000489573 INIPQ9NRY2 104 aa19.47■□□□□ 0.71
SMC4-221ENST00000489573 SNX5Q9Y5X3 404 aa19.47■□□□□ 0.71
SMC4-221ENST00000489573 C11orf98E9PRG8 122 aa19.46■□□□□ 0.71
SMC4-221ENST00000489573 GLSO94925 669 aaPredicted RBP19.46■□□□□ 0.71
SMC4-221ENST00000489573 HPNP05981 417 aa19.46■□□□□ 0.71
SMC4-221ENST00000489573 DBTP11182 482 aaKnown RBP19.46■□□□□ 0.71
SMC4-221ENST00000489573 HIST1H1CP16403 213 aaKnown RBP19.46■□□□□ 0.71
SMC4-221ENST00000489573 SLC15A1P46059 708 aa19.46■□□□□ 0.71
SMC4-221ENST00000489573 OR2B6P58173 313 aa19.46■□□□□ 0.71
SMC4-221ENST00000489573 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.46■□□□□ 0.71
SMC4-221ENST00000489573 ITGADQ13349 1161 aa19.46■□□□□ 0.71
SMC4-221ENST00000489573 CRMP1Q14194 572 aa19.46■□□□□ 0.71
SMC4-221ENST00000489573 ZNF362Q5T0B9 420 aaPredicted RBP19.46■□□□□ 0.71
SMC4-221ENST00000489573 PLBD1Q6P4A8 553 aa19.46■□□□□ 0.71
SMC4-221ENST00000489573 FAM122BQ7Z309 247 aa19.46■□□□□ 0.71
SMC4-221ENST00000489573 ZFP62Q8NB50 900 aaPredicted RBP19.46■□□□□ 0.71
SMC4-221ENST00000489573 FAM98AQ8NCA5 519 aaKnown RBP19.46■□□□□ 0.71
SMC4-221ENST00000489573 LSM14AQ8ND56 463 aaKnown RBP19.46■□□□□ 0.71
SMC4-221ENST00000489573 OR52E2Q8NGJ4 325 aa19.46■□□□□ 0.71
SMC4-221ENST00000489573 OR4K13Q8NH42 304 aa19.46■□□□□ 0.71
SMC4-221ENST00000489573 RFKQ969G6 155 aa19.46■□□□□ 0.71
SMC4-221ENST00000489573 MIB2Q96AX9 1013 aa19.46■□□□□ 0.71
SMC4-221ENST00000489573 CCDC90BQ9GZT6 254 aa19.46■□□□□ 0.71
SMC4-221ENST00000489573 TRAPPC4Q9Y296 219 aa19.46■□□□□ 0.71
SMC4-221ENST00000489573 TEX13CA0A0J9YWL9 993 aa19.45■□□□□ 0.7
SMC4-221ENST00000489573 FAM183AA6NL82 134 aa19.45■□□□□ 0.7
SMC4-221ENST00000489573 FAM166BA8MTA8 275 aa19.45■□□□□ 0.7
SMC4-221ENST00000489573 PRR23D1E9PI22 279 aaPredicted RBP19.45■□□□□ 0.7
SMC4-221ENST00000489573 M0R3G1 203 aa19.45■□□□□ 0.7
SMC4-221ENST00000489573 RRP8O43159 456 aaKnown RBP19.45■□□□□ 0.7
SMC4-221ENST00000489573 TXNDC12O95881 172 aa19.45■□□□□ 0.7
SMC4-221ENST00000489573 TFAP2AP05549 437 aa19.45■□□□□ 0.7
SMC4-221ENST00000489573 PRR23D2P0DMB1 279 aaPredicted RBP19.45■□□□□ 0.7
SMC4-221ENST00000489573 PIPP12273 146 aaPredicted RBP19.45■□□□□ 0.7
SMC4-221ENST00000489573 PAICSP22234 425 aaKnown RBP19.45■□□□□ 0.7
SMC4-221ENST00000489573 AHCYP23526 432 aa19.45■□□□□ 0.7
SMC4-221ENST00000489573 SDHAP31040 664 aa19.45■□□□□ 0.7
SMC4-221ENST00000489573 RPL5P46777 297 aaKnown RBP19.45■□□□□ 0.7
SMC4-221ENST00000489573 NR1H2P55055 460 aa19.45■□□□□ 0.7
SMC4-221ENST00000489573 CDH11P55287 796 aa19.45■□□□□ 0.7
SMC4-221ENST00000489573 TLE3Q04726 772 aa19.45■□□□□ 0.7
SMC4-221ENST00000489573 PUDPQ08623 228 aa19.45■□□□□ 0.7
SMC4-221ENST00000489573 ZP4Q12836 540 aa19.45■□□□□ 0.7
SMC4-221ENST00000489573 HYAL4Q2M3T9 481 aa19.45■□□□□ 0.7
SMC4-221ENST00000489573 GPR139Q6DWJ6 353 aa19.45■□□□□ 0.7
SMC4-221ENST00000489573 TMPPEQ6ZT21 453 aa19.45■□□□□ 0.7
SMC4-221ENST00000489573 GID4Q8IVV7 300 aa19.45■□□□□ 0.7
SMC4-221ENST00000489573 SPARTQ8N0X7 666 aa19.45■□□□□ 0.7
SMC4-221ENST00000489573 TMEM251Q8N6I4 163 aa19.45■□□□□ 0.7
SMC4-221ENST00000489573 SLC37A3Q8NCC5 494 aa19.45■□□□□ 0.7
SMC4-221ENST00000489573 BBS1Q8NFJ9 593 aa19.45■□□□□ 0.7
SMC4-221ENST00000489573 SMPDL3BQ92485 455 aa19.45■□□□□ 0.7
SMC4-221ENST00000489573 RASD2Q96D21 266 aa19.45■□□□□ 0.7
SMC4-221ENST00000489573 Q96M85 177 aa19.45■□□□□ 0.7
SMC4-221ENST00000489573 TSPAN32Q96QS1 320 aa19.45■□□□□ 0.7
SMC4-221ENST00000489573 H2AFY2Q9P0M6 372 aaPredicted RBP19.45■□□□□ 0.7
SMC4-221ENST00000489573 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.45■□□□□ 0.7
SMC4-221ENST00000489573 B3GALT5Q9Y2C3 310 aa19.45■□□□□ 0.7
SMC4-221ENST00000489573 CSAG2Q9Y5P2 127 aa19.45■□□□□ 0.7
SMC4-221ENST00000489573 SULT2B1O00204 365 aa19.44■□□□□ 0.7
SMC4-221ENST00000489573 PMS2P2O95744 297 aa19.44■□□□□ 0.7
SMC4-221ENST00000489573 CDK1P06493 297 aa19.44■□□□□ 0.7
SMC4-221ENST00000489573 ADRB1P08588 477 aa19.44■□□□□ 0.7
SMC4-221ENST00000489573 ACVR2AP27037 513 aa19.44■□□□□ 0.7
SMC4-221ENST00000489573 DIO1P49895 249 aa19.44■□□□□ 0.7
SMC4-221ENST00000489573 SLC35A1P78382 337 aa19.44■□□□□ 0.7
SMC4-221ENST00000489573 EMC4Q5J8M3 183 aa19.44■□□□□ 0.7
SMC4-221ENST00000489573 PRSS48Q7RTY5 328 aa19.44■□□□□ 0.7
SMC4-221ENST00000489573 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.44■□□□□ 0.7
SMC4-221ENST00000489573 STX19Q8N4C7 294 aa19.44■□□□□ 0.7
SMC4-221ENST00000489573 ADPRHL1Q8NDY3 354 aa19.44■□□□□ 0.7
SMC4-221ENST00000489573 SDR9C7Q8NEX9 313 aa19.44■□□□□ 0.7
SMC4-221ENST00000489573 TM9SF4Q92544 642 aa19.44■□□□□ 0.7
SMC4-221ENST00000489573 OTULINQ96BN8 352 aa19.44■□□□□ 0.7
SMC4-221ENST00000489573 KLHL15Q96M94 604 aa19.44■□□□□ 0.7
SMC4-221ENST00000489573 DCBLD2Q96PD2 775 aa19.44■□□□□ 0.7
SMC4-221ENST00000489573 SIGLEC11Q96RL6 698 aa19.44■□□□□ 0.7
SMC4-221ENST00000489573 GRHPRQ9UBQ7 328 aa19.44■□□□□ 0.7
SMC4-221ENST00000489573 FREM2Q5SZK8 3169 aa19.44■□□□□ 0.7
SMC4-221ENST00000489573 TRAV17A0A0B4J275 112 aa19.44■□□□□ 0.7
SMC4-221ENST00000489573 LINC01387J3KSC0 135 aa19.44■□□□□ 0.7
SMC4-221ENST00000489573 AKR7A3O95154 331 aa19.44■□□□□ 0.7
SMC4-221ENST00000489573 MT-ND2P03891 347 aa19.44■□□□□ 0.7
SMC4-221ENST00000489573 MAGEA5P43359 124 aa19.44■□□□□ 0.7
SMC4-221ENST00000489573 NIPAL3Q6P499 406 aa19.44■□□□□ 0.7
SMC4-221ENST00000489573 KCTD8Q6ZWB6 473 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms