RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 STK35Q8TDR2 534 aa8.13□□□□□ -1.11
SNX17-207ENST00000489402 HPS1Q92902 700 aa8.13□□□□□ -1.11
SNX17-207ENST00000489402 SLC25A36Q96CQ1 311 aa8.13□□□□□ -1.11
SNX17-207ENST00000489402 TRIM44Q96DX7 344 aaPredicted RBP8.13□□□□□ -1.11
SNX17-207ENST00000489402 ANKRD27Q96NW4 1050 aa8.13□□□□□ -1.11
SNX17-207ENST00000489402 SORT1Q99523 831 aa8.13□□□□□ -1.11
SNX17-207ENST00000489402 TMEM109Q9BVC6 243 aa8.13□□□□□ -1.11
SNX17-207ENST00000489402 ZNF442Q9H7R0 627 aa8.13□□□□□ -1.11
SNX17-207ENST00000489402 SSU72Q9NP77 194 aaKnown RBP8.13□□□□□ -1.11
SNX17-207ENST00000489402 AIG1Q9NVV5 245 aa8.13□□□□□ -1.11
SNX17-207ENST00000489402 HAO1Q9UJM8 370 aa8.13□□□□□ -1.11
SNX17-207ENST00000489402 ZNF232Q9UNY5 417 aa8.13□□□□□ -1.11
SNX17-207ENST00000489402 RCE1Q9Y256 329 aa8.13□□□□□ -1.11
SNX17-207ENST00000489402 ZNF443Q9Y2A4 671 aaPredicted RBP8.13□□□□□ -1.11
SNX17-207ENST00000489402 TENM1Q9UKZ4 2725 aa8.12□□□□□ -1.11
SNX17-207ENST00000489402 LRP5LA4QPB2 252 aa8.12□□□□□ -1.11
SNX17-207ENST00000489402 RPL36A-HNRNPH2H7BZ11 118 aa8.12□□□□□ -1.11
SNX17-207ENST00000489402 TCF21O43680 179 aa8.12□□□□□ -1.11
SNX17-207ENST00000489402 AKAP8O43823 692 aaKnown RBP8.12□□□□□ -1.11
SNX17-207ENST00000489402 SLC43A1O75387 559 aa8.12□□□□□ -1.11
SNX17-207ENST00000489402 IGKV3-15P01624 115 aa8.12□□□□□ -1.11
SNX17-207ENST00000489402 IGLV1-44P01699 117 aa8.12□□□□□ -1.11
SNX17-207ENST00000489402 PNMTP11086 282 aa8.12□□□□□ -1.11
SNX17-207ENST00000489402 CBR1P16152 277 aa8.12□□□□□ -1.11
SNX17-207ENST00000489402 BGNP21810 368 aa8.12□□□□□ -1.11
SNX17-207ENST00000489402 PCMT1P22061 227 aa8.12□□□□□ -1.11
SNX17-207ENST00000489402 APEX1P27695 318 aaKnown RBP8.12□□□□□ -1.11
SNX17-207ENST00000489402 IL12AP29459 219 aa8.12□□□□□ -1.11
SNX17-207ENST00000489402 CALCRP30988 508 aa8.12□□□□□ -1.11
SNX17-207ENST00000489402 ARR3P36575 388 aa8.12□□□□□ -1.11
SNX17-207ENST00000489402 CAPZA2P47755 286 aa8.12□□□□□ -1.11
SNX17-207ENST00000489402 P2RY4P51582 365 aa8.12□□□□□ -1.11
SNX17-207ENST00000489402 DSTNP60981 165 aa8.12□□□□□ -1.11
SNX17-207ENST00000489402 IL1RL1Q01638 556 aa8.12□□□□□ -1.11
SNX17-207ENST00000489402 NPRL3Q12980 569 aa8.12□□□□□ -1.11
SNX17-207ENST00000489402 C1DQ13901 141 aaKnown RBP8.12□□□□□ -1.11
SNX17-207ENST00000489402 MPP2Q14168 576 aa8.12□□□□□ -1.11
SNX17-207ENST00000489402 UGT2A3Q6UWM9 527 aa8.12□□□□□ -1.11
SNX17-207ENST00000489402 LINGO2Q7L985 606 aa8.12□□□□□ -1.11
SNX17-207ENST00000489402 SPATA21Q7Z572 469 aa8.12□□□□□ -1.11
SNX17-207ENST00000489402 EPHX4Q8IUS5 362 aa8.12□□□□□ -1.11
SNX17-207ENST00000489402 CCDC36Q8IYA8 594 aa8.12□□□□□ -1.11
SNX17-207ENST00000489402 SVOPLQ8N434 492 aa8.12□□□□□ -1.11
SNX17-207ENST00000489402 LINC01356Q8N9X3 169 aa8.12□□□□□ -1.11
SNX17-207ENST00000489402 ANKK1Q8NFD2 765 aa8.12□□□□□ -1.11
SNX17-207ENST00000489402 AENQ8WTP8 325 aaKnown RBP8.12□□□□□ -1.11
SNX17-207ENST00000489402 SOX7Q9BT81 388 aa8.12□□□□□ -1.11
SNX17-207ENST00000489402 SPATA9Q9BWV2 254 aa8.12□□□□□ -1.11
SNX17-207ENST00000489402 RSPO3Q9BXY4 272 aaPredicted RBP8.12□□□□□ -1.11
SNX17-207ENST00000489402 NELFAQ9H3P2 528 aa8.12□□□□□ -1.11
SNX17-207ENST00000489402 RMND5AQ9H871 391 aa8.12□□□□□ -1.11
SNX17-207ENST00000489402 SEC61A2Q9H9S3 476 aa8.12□□□□□ -1.11
SNX17-207ENST00000489402 SLC6A13Q9NSD5 602 aa8.12□□□□□ -1.11
SNX17-207ENST00000489402 PNPOQ9NVS9 261 aa8.12□□□□□ -1.11
SNX17-207ENST00000489402 THUMPD1Q9NXG2 353 aaKnown RBP8.12□□□□□ -1.11
SNX17-207ENST00000489402 RPS6KB2Q9UBS0 482 aa8.12□□□□□ -1.11
SNX17-207ENST00000489402 TMEFF2Q9UIK5 374 aaPredicted RBP8.12□□□□□ -1.11
SNX17-207ENST00000489402 IFT52Q9Y366 437 aa8.12□□□□□ -1.11
SNX17-207ENST00000489402 IGHV2OR16-5A0A0B4J2B6 119 aa8.11□□□□□ -1.11
SNX17-207ENST00000489402 A0A0G2JPF8 293 aa8.11□□□□□ -1.11
SNX17-207ENST00000489402 SH3PXD2BA1X283 911 aa8.11□□□□□ -1.11
SNX17-207ENST00000489402 TRPC5OSA6NMA1 111 aa8.11□□□□□ -1.11
SNX17-207ENST00000489402 TMEM229AB2RXF0 380 aa8.11□□□□□ -1.11
SNX17-207ENST00000489402 HNRNPCL2B2RXH8 293 aa8.11□□□□□ -1.11
SNX17-207ENST00000489402 HNRNPCL3B7ZW38 293 aa8.11□□□□□ -1.11
SNX17-207ENST00000489402 SDHDO14521 159 aa8.11□□□□□ -1.11
SNX17-207ENST00000489402 AIM2O14862 343 aa8.11□□□□□ -1.11
SNX17-207ENST00000489402 HNRNPCL1O60812 293 aaKnown RBP8.11□□□□□ -1.11
SNX17-207ENST00000489402 NPIPB7O75200 414 aa8.11□□□□□ -1.11
SNX17-207ENST00000489402 IL6P05231 212 aa8.11□□□□□ -1.11
SNX17-207ENST00000489402 CELA3BP08861 270 aa8.11□□□□□ -1.11
SNX17-207ENST00000489402 TACSTD2P09758 323 aa8.11□□□□□ -1.11
SNX17-207ENST00000489402 HNRNPCL4P0DMR1 293 aa8.11□□□□□ -1.11
SNX17-207ENST00000489402 PRG2P13727 222 aa8.11□□□□□ -1.11
SNX17-207ENST00000489402 ETFAP13804 333 aa8.11□□□□□ -1.11
SNX17-207ENST00000489402 IDO1P14902 403 aa8.11□□□□□ -1.11
SNX17-207ENST00000489402 IFNGR1P15260 489 aa8.11□□□□□ -1.11
SNX17-207ENST00000489402 THBS4P35443 961 aa8.11□□□□□ -1.11
SNX17-207ENST00000489402 RPS5P46782 204 aaKnown RBP8.11□□□□□ -1.11
SNX17-207ENST00000489402 ARF1P84077 181 aaKnown RBP8.11□□□□□ -1.11
SNX17-207ENST00000489402 HGFACQ04756 655 aa8.11□□□□□ -1.11
SNX17-207ENST00000489402 BST1Q10588 318 aa8.11□□□□□ -1.11
SNX17-207ENST00000489402 SNTB2Q13425 540 aaKnown RBP8.11□□□□□ -1.11
SNX17-207ENST00000489402 DAG1Q14118 895 aa8.11□□□□□ -1.11
SNX17-207ENST00000489402 ADRM1Q16186 407 aa8.11□□□□□ -1.11
SNX17-207ENST00000489402 CEACAM16Q2WEN9 425 aa8.11□□□□□ -1.11
SNX17-207ENST00000489402 ZNF311Q5JNZ3 666 aa8.11□□□□□ -1.11
SNX17-207ENST00000489402 RPS26P11Q5JNZ5 115 aaPredicted RBP8.11□□□□□ -1.11
SNX17-207ENST00000489402 NXNQ6DKJ4 435 aa8.11□□□□□ -1.11
SNX17-207ENST00000489402 C5orf46Q6UWT4 87 aa8.11□□□□□ -1.11
SNX17-207ENST00000489402 SERPINA11Q86U17 422 aa8.11□□□□□ -1.11
SNX17-207ENST00000489402 KDM8Q8N371 416 aa8.11□□□□□ -1.11
SNX17-207ENST00000489402 ZNF786Q8N393 782 aa8.11□□□□□ -1.11
SNX17-207ENST00000489402 CLIP4Q8N3C7 705 aa8.11□□□□□ -1.11
SNX17-207ENST00000489402 PIK3C3Q8NEB9 887 aa8.11□□□□□ -1.11
SNX17-207ENST00000489402 IL17RDQ8NFM7 739 aa8.11□□□□□ -1.11
SNX17-207ENST00000489402 UBASH3BQ8TF42 649 aa8.11□□□□□ -1.11
SNX17-207ENST00000489402 SLC38A5Q8WUX1 472 aa8.11□□□□□ -1.11
SNX17-207ENST00000489402 CKAP2Q8WWK9 683 aa8.11□□□□□ -1.11
SNX17-207ENST00000489402 TMEM19Q96HH6 336 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms