RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.7□□□□□ -0.86
HDAC6-233ENST00000489352 DNAH1Q9P2D7 4330 aa9.7□□□□□ -0.86
HDAC6-233ENST00000489352 TANC2Q9HCD6 1990 aa9.7□□□□□ -0.86
HDAC6-233ENST00000489352 LYSTQ99698 3801 aa9.69□□□□□ -0.86
HDAC6-233ENST00000489352 CCDC189A1A4V9 331 aa9.69□□□□□ -0.86
HDAC6-233ENST00000489352 FAM187AA6NFU0 413 aa9.69□□□□□ -0.86
HDAC6-233ENST00000489352 POC1B-GALNT4F8VUJ3 575 aa9.69□□□□□ -0.86
HDAC6-233ENST00000489352 UPK3AO75631 287 aa9.69□□□□□ -0.86
HDAC6-233ENST00000489352 RSL1D1O76021 490 aaKnown RBP9.69□□□□□ -0.86
HDAC6-233ENST00000489352 UBTFL6P0CB48 400 aaPredicted RBP9.69□□□□□ -0.86
HDAC6-233ENST00000489352 OR12D1P0DN82 309 aa9.69□□□□□ -0.86
HDAC6-233ENST00000489352 ZNF35P13682 527 aa9.69□□□□□ -0.86
HDAC6-233ENST00000489352 PTDSS1P48651 473 aaKnown RBP9.69□□□□□ -0.86
HDAC6-233ENST00000489352 ARL4CP56559 192 aa9.69□□□□□ -0.86
HDAC6-233ENST00000489352 GNB2P62879 340 aa9.69□□□□□ -0.86
HDAC6-233ENST00000489352 EMX1Q04741 257 aaPredicted RBP9.69□□□□□ -0.86
HDAC6-233ENST00000489352 PIGFQ07326 219 aa9.69□□□□□ -0.86
HDAC6-233ENST00000489352 DCTN2Q13561 401 aaKnown RBP9.69□□□□□ -0.86
HDAC6-233ENST00000489352 FXNQ16595 210 aa9.69□□□□□ -0.86
HDAC6-233ENST00000489352 PRSS53Q2L4Q9 553 aa9.69□□□□□ -0.86
HDAC6-233ENST00000489352 FAM209AQ5JX71 171 aa9.69□□□□□ -0.86
HDAC6-233ENST00000489352 SPDYAQ5MJ70 313 aa9.69□□□□□ -0.86
HDAC6-233ENST00000489352 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.69□□□□□ -0.86
HDAC6-233ENST00000489352 NOXRED1Q6NXP6 359 aa9.69□□□□□ -0.86
HDAC6-233ENST00000489352 VASH1Q7L8A9 365 aaPredicted RBP9.69□□□□□ -0.86
HDAC6-233ENST00000489352 GALNT4Q8N4A0 578 aa9.69□□□□□ -0.86
HDAC6-233ENST00000489352 PTGR2Q8N8N7 351 aaPredicted RBP9.69□□□□□ -0.86
HDAC6-233ENST00000489352 ZIC4Q8N9L1 334 aa9.69□□□□□ -0.86
HDAC6-233ENST00000489352 FBXO36Q8NEA4 188 aa9.69□□□□□ -0.86
HDAC6-233ENST00000489352 MUC7Q8TAX7 377 aa9.69□□□□□ -0.86
HDAC6-233ENST00000489352 LRTOMTQ8WZ04 291 aa9.69□□□□□ -0.86
HDAC6-233ENST00000489352 RBMXL1Q96E39 390 aaKnown RBP9.69□□□□□ -0.86
HDAC6-233ENST00000489352 NEURL3Q96EH8 262 aa9.69□□□□□ -0.86
HDAC6-233ENST00000489352 CCDC106Q9BWC9 280 aa9.69□□□□□ -0.86
HDAC6-233ENST00000489352 ACTRT3Q9BYD9 372 aa9.69□□□□□ -0.86
HDAC6-233ENST00000489352 DPAGT1Q9H3H5 408 aa9.69□□□□□ -0.86
HDAC6-233ENST00000489352 TOR3AQ9H497 397 aa9.69□□□□□ -0.86
HDAC6-233ENST00000489352 PIF1Q9H611 641 aa9.69□□□□□ -0.86
HDAC6-233ENST00000489352 PATZ1Q9HBE1 687 aaKnown RBP9.69□□□□□ -0.86
HDAC6-233ENST00000489352 SLC7A8Q9UHI5 535 aa9.69□□□□□ -0.86
HDAC6-233ENST00000489352 PCDHGB4Q9UN71 923 aa9.69□□□□□ -0.86
HDAC6-233ENST00000489352 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.68□□□□□ -0.86
HDAC6-233ENST00000489352 TMEM229AB2RXF0 380 aa9.68□□□□□ -0.86
HDAC6-233ENST00000489352 PDPK1O15530 556 aa9.68□□□□□ -0.86
HDAC6-233ENST00000489352 CLPTM1O96005 669 aa9.68□□□□□ -0.86
HDAC6-233ENST00000489352 CSTAP01040 98 aa9.68□□□□□ -0.86
HDAC6-233ENST00000489352 CD33P20138 364 aa9.68□□□□□ -0.86
HDAC6-233ENST00000489352 MAKP20794 623 aa9.68□□□□□ -0.86
HDAC6-233ENST00000489352 UQCRC2P22695 453 aa9.68□□□□□ -0.86
HDAC6-233ENST00000489352 PCBP3P57721 371 aaKnown RBP9.68□□□□□ -0.86
HDAC6-233ENST00000489352 SEC61A1P61619 476 aaKnown RBP9.68□□□□□ -0.86
HDAC6-233ENST00000489352 NSUN5P1Q3KNT7 163 aa9.68□□□□□ -0.86
HDAC6-233ENST00000489352 LINGO2Q7L985 606 aa9.68□□□□□ -0.86
HDAC6-233ENST00000489352 GRINAQ7Z429 371 aa9.68□□□□□ -0.86
HDAC6-233ENST00000489352 TMEM99Q8N816 258 aa9.68□□□□□ -0.86
HDAC6-233ENST00000489352 ADAMTS15Q8TE58 950 aa9.68□□□□□ -0.86
HDAC6-233ENST00000489352 DCAKDQ8WVC6 231 aa9.68□□□□□ -0.86
HDAC6-233ENST00000489352 C11orf40Q8WZ69 217 aa9.68□□□□□ -0.86
HDAC6-233ENST00000489352 R3HDM4Q96D70 268 aa9.68□□□□□ -0.86
HDAC6-233ENST00000489352 GIMAP5Q96F15 307 aa9.68□□□□□ -0.86
HDAC6-233ENST00000489352 APIPQ96GX9 242 aa9.68□□□□□ -0.86
HDAC6-233ENST00000489352 NSUN5Q96P11 429 aaKnown RBP9.68□□□□□ -0.86
HDAC6-233ENST00000489352 STACQ99469 402 aa9.68□□□□□ -0.86
HDAC6-233ENST00000489352 DESI2Q9BSY9 194 aa9.68□□□□□ -0.86
HDAC6-233ENST00000489352 LINC00470Q9BZP3 86 aa9.68□□□□□ -0.86
HDAC6-233ENST00000489352 TMEM165Q9HC07 324 aa9.68□□□□□ -0.86
HDAC6-233ENST00000489352 DUSP22Q9NRW4 184 aa9.68□□□□□ -0.86
HDAC6-233ENST00000489352 PCTPQ9UKL6 214 aa9.68□□□□□ -0.86
HDAC6-233ENST00000489352 TRIM33Q9UPN9 1127 aa9.68□□□□□ -0.86
HDAC6-233ENST00000489352 NPTNQ9Y639 398 aa9.68□□□□□ -0.86
HDAC6-233ENST00000489352 WI2-2373I1.2A0A1W2PRP0 233 aa9.67□□□□□ -0.86
HDAC6-233ENST00000489352 BTBD17A6NE02 478 aa9.67□□□□□ -0.86
HDAC6-233ENST00000489352 ZNF503-AS2A6NEH8 195 aa9.67□□□□□ -0.86
HDAC6-233ENST00000489352 ANKRD61A6NGH8 418 aa9.67□□□□□ -0.86
HDAC6-233ENST00000489352 A8MXK9 166 aa9.67□□□□□ -0.86
HDAC6-233ENST00000489352 MANBAO00462 879 aa9.67□□□□□ -0.86
HDAC6-233ENST00000489352 AKR7A3O95154 331 aa9.67□□□□□ -0.86
HDAC6-233ENST00000489352 RAB36O95755 333 aa9.67□□□□□ -0.86
HDAC6-233ENST00000489352 HLA-HP01893 362 aa9.67□□□□□ -0.86
HDAC6-233ENST00000489352 LCKP06239 509 aa9.67□□□□□ -0.86
HDAC6-233ENST00000489352 GPIP06744 558 aa9.67□□□□□ -0.86
HDAC6-233ENST00000489352 OR8G3PP0DMU2 310 aa9.67□□□□□ -0.86
HDAC6-233ENST00000489352 UROSP10746 265 aa9.67□□□□□ -0.86
HDAC6-233ENST00000489352 CHN1P15882 459 aa9.67□□□□□ -0.86
HDAC6-233ENST00000489352 RYKP34925 604 aa9.67□□□□□ -0.86
HDAC6-233ENST00000489352 ZNF81P51508 661 aa9.67□□□□□ -0.86
HDAC6-233ENST00000489352 PDIA2Q13087 525 aaKnown RBP9.67□□□□□ -0.86
HDAC6-233ENST00000489352 SKP2Q13309 424 aa9.67□□□□□ -0.86
HDAC6-233ENST00000489352 ATP6AP1LQ52LC2 224 aa9.67□□□□□ -0.86
HDAC6-233ENST00000489352 DCST2Q5T1A1 773 aa9.67□□□□□ -0.86
HDAC6-233ENST00000489352 PDZK1Q5T2W1 519 aa9.67□□□□□ -0.86
HDAC6-233ENST00000489352 LETMD1Q6P1Q0 360 aa9.67□□□□□ -0.86
HDAC6-233ENST00000489352 CTAGE3PQ8IX95 158 aa9.67□□□□□ -0.86
HDAC6-233ENST00000489352 GPR137CQ8N3F9 429 aa9.67□□□□□ -0.86
HDAC6-233ENST00000489352 ANKK1Q8NFD2 765 aa9.67□□□□□ -0.86
HDAC6-233ENST00000489352 OR4F17Q8NGA8 305 aa9.67□□□□□ -0.86
HDAC6-233ENST00000489352 THOC1Q96FV9 657 aaKnown RBP9.67□□□□□ -0.86
HDAC6-233ENST00000489352 TSPAN32Q96QS1 320 aa9.67□□□□□ -0.86
HDAC6-233ENST00000489352 OR4F4Q96R69 305 aa9.67□□□□□ -0.86
HDAC6-233ENST00000489352 PIGUQ9H490 435 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms