RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 C8BP07358 591 aa21.91■■□□□ 1.1
HMGN1-217ENST00000489072 CBLP22681 906 aa21.91■■□□□ 1.1
HMGN1-217ENST00000489072 LTBQ06643 244 aa21.91■■□□□ 1.1
HMGN1-217ENST00000489072 SPOCK1Q08629 439 aa21.91■■□□□ 1.1
HMGN1-217ENST00000489072 VMACQ2NL98 169 aa21.91■■□□□ 1.1
HMGN1-217ENST00000489072 PGGHGQ32M88 737 aa21.91■■□□□ 1.1
HMGN1-217ENST00000489072 HSP90B2PQ58FF3 399 aa21.91■■□□□ 1.1
HMGN1-217ENST00000489072 COQ5Q5HYK3 327 aa21.91■■□□□ 1.1
HMGN1-217ENST00000489072 LINGO2Q7L985 606 aa21.91■■□□□ 1.1
HMGN1-217ENST00000489072 PATL1Q86TB9 770 aaKnown RBP21.91■■□□□ 1.1
HMGN1-217ENST00000489072 SNX32Q86XE0 403 aa21.91■■□□□ 1.1
HMGN1-217ENST00000489072 CALHM3Q86XJ0 350 aa21.91■■□□□ 1.1
HMGN1-217ENST00000489072 RBM45Q8IUH3 476 aaKnown RBP21.91■■□□□ 1.1
HMGN1-217ENST00000489072 SLC30A8Q8IWU4 369 aa21.91■■□□□ 1.1
HMGN1-217ENST00000489072 C17orf78Q8N4C9 275 aa21.91■■□□□ 1.1
HMGN1-217ENST00000489072 OR6T1Q8NGN1 323 aa21.91■■□□□ 1.1
HMGN1-217ENST00000489072 C18orf12Q96KH6 178 aa21.91■■□□□ 1.1
HMGN1-217ENST00000489072 Q96MF0 132 aa21.91■■□□□ 1.1
HMGN1-217ENST00000489072 MCHR1Q99705 422 aa21.91■■□□□ 1.1
HMGN1-217ENST00000489072 MRGBPQ9NV56 204 aa21.91■■□□□ 1.1
HMGN1-217ENST00000489072 SELENONQ9NZV5 590 aa21.91■■□□□ 1.1
HMGN1-217ENST00000489072 NSD1Q96L73 2696 aaPredicted RBP21.91■■□□□ 1.1
HMGN1-217ENST00000489072 MRASO14807 208 aa21.9■■□□□ 1.1
HMGN1-217ENST00000489072 FMO6PO60774 539 aa21.9■■□□□ 1.1
HMGN1-217ENST00000489072 UPK3AO75631 287 aa21.9■■□□□ 1.1
HMGN1-217ENST00000489072 CDH2P19022 906 aaPredicted RBP21.9■■□□□ 1.1
HMGN1-217ENST00000489072 CDH11P55287 796 aa21.9■■□□□ 1.1
HMGN1-217ENST00000489072 CLDN17P56750 224 aa21.9■■□□□ 1.1
HMGN1-217ENST00000489072 RPS4XP62701 263 aaKnown RBP21.9■■□□□ 1.1
HMGN1-217ENST00000489072 TGFBR3Q03167 851 aa21.9■■□□□ 1.1
HMGN1-217ENST00000489072 TMEM108Q6UXF1 575 aa21.9■■□□□ 1.1
HMGN1-217ENST00000489072 OXGR1Q96P68 337 aa21.9■■□□□ 1.1
HMGN1-217ENST00000489072 ALKBH3Q96Q83 286 aaPredicted RBP21.9■■□□□ 1.1
HMGN1-217ENST00000489072 SMR3AQ99954 134 aa21.9■■□□□ 1.1
HMGN1-217ENST00000489072 MED4Q9NPJ6 270 aa21.9■■□□□ 1.1
HMGN1-217ENST00000489072 CISD1Q9NZ45 108 aaKnown RBP21.9■■□□□ 1.1
HMGN1-217ENST00000489072 USP22Q9UPT9 525 aa21.9■■□□□ 1.1
HMGN1-217ENST00000489072 B3GALT5Q9Y2C3 310 aa21.9■■□□□ 1.1
HMGN1-217ENST00000489072 MAGED1Q9Y5V3 778 aaPredicted RBP21.9■■□□□ 1.1
HMGN1-217ENST00000489072 LOC100653049A0A140TA62 436 aa21.89■■□□□ 1.09
HMGN1-217ENST00000489072 BBIP1A8MTZ0 92 aa21.89■■□□□ 1.09
HMGN1-217ENST00000489072 M0R1B8 84 aa21.89■■□□□ 1.09
HMGN1-217ENST00000489072 OVOL3O00110 214 aa21.89■■□□□ 1.09
HMGN1-217ENST00000489072 KRT34O76011 436 aa21.89■■□□□ 1.09
HMGN1-217ENST00000489072 ZNF432O94892 652 aa21.89■■□□□ 1.09
HMGN1-217ENST00000489072 BGLAPP02818 100 aa21.89■■□□□ 1.09
HMGN1-217ENST00000489072 ZNF43P17038 809 aa21.89■■□□□ 1.09
HMGN1-217ENST00000489072 CD40P25942 277 aa21.89■■□□□ 1.09
HMGN1-217ENST00000489072 MMEL1Q495T6 779 aa21.89■■□□□ 1.09
HMGN1-217ENST00000489072 HIKESHIQ53FT3 197 aa21.89■■□□□ 1.09
HMGN1-217ENST00000489072 SWT1Q5T5J6 900 aaKnown RBP21.89■■□□□ 1.09
HMGN1-217ENST00000489072 KLHL17Q6TDP4 642 aa21.89■■□□□ 1.09
HMGN1-217ENST00000489072 H1FNTQ75WM6 255 aaPredicted RBP21.89■■□□□ 1.09
HMGN1-217ENST00000489072 CCDC80Q76M96 950 aa21.89■■□□□ 1.09
HMGN1-217ENST00000489072 TSPYL5Q86VY4 417 aaPredicted RBP21.89■■□□□ 1.09
HMGN1-217ENST00000489072 CIARTQ8N365 385 aaPredicted RBP21.89■■□□□ 1.09
HMGN1-217ENST00000489072 OR8J3Q8NGG0 315 aa21.89■■□□□ 1.09
HMGN1-217ENST00000489072 OR6S1Q8NH40 331 aa21.89■■□□□ 1.09
HMGN1-217ENST00000489072 VANGL1Q8TAA9 524 aaPredicted RBP21.89■■□□□ 1.09
HMGN1-217ENST00000489072 C10orf82Q8WW14 230 aa21.89■■□□□ 1.09
HMGN1-217ENST00000489072 AMDHD2Q9Y303 409 aa21.89■■□□□ 1.09
HMGN1-217ENST00000489072 ZNF587BE7ETH6 402 aa21.88■■□□□ 1.09
HMGN1-217ENST00000489072 KRT33AO76009 404 aa21.88■■□□□ 1.09
HMGN1-217ENST00000489072 LYPD3O95274 346 aa21.88■■□□□ 1.09
HMGN1-217ENST00000489072 HPRP00739 348 aa21.88■■□□□ 1.09
HMGN1-217ENST00000489072 THY1P04216 161 aa21.88■■□□□ 1.09
HMGN1-217ENST00000489072 PTAFRP25105 342 aa21.88■■□□□ 1.09
HMGN1-217ENST00000489072 MAPRE2Q15555 327 aa21.88■■□□□ 1.09
HMGN1-217ENST00000489072 ENTPD8Q5MY95 495 aa21.88■■□□□ 1.09
HMGN1-217ENST00000489072 INTS11Q5TA45 600 aaKnown RBP21.88■■□□□ 1.09
HMGN1-217ENST00000489072 ZNF613Q6PF04 617 aa21.88■■□□□ 1.09
HMGN1-217ENST00000489072 LINC00114Q6XXX2 140 aa21.88■■□□□ 1.09
HMGN1-217ENST00000489072 ABHD12BQ7Z5M8 362 aaPredicted RBP21.88■■□□□ 1.09
HMGN1-217ENST00000489072 ADPRHL1Q8NDY3 354 aa21.88■■□□□ 1.09
HMGN1-217ENST00000489072 SLC41A3Q96GZ6 507 aa21.88■■□□□ 1.09
HMGN1-217ENST00000489072 BOD1Q96IK1 185 aa21.88■■□□□ 1.09
HMGN1-217ENST00000489072 MOGAT1Q96PD6 335 aa21.88■■□□□ 1.09
HMGN1-217ENST00000489072 ZNF317Q96PQ6 595 aaPredicted RBP21.88■■□□□ 1.09
HMGN1-217ENST00000489072 EPYCQ99645 322 aa21.88■■□□□ 1.09
HMGN1-217ENST00000489072 SH3GL1Q99961 368 aa21.88■■□□□ 1.09
HMGN1-217ENST00000489072 TMEM43Q9BTV4 400 aa21.88■■□□□ 1.09
HMGN1-217ENST00000489072 LINC00470Q9BZP3 86 aa21.88■■□□□ 1.09
HMGN1-217ENST00000489072 MGAT4BQ9UQ53 548 aa21.88■■□□□ 1.09
HMGN1-217ENST00000489072 RCE1Q9Y256 329 aa21.88■■□□□ 1.09
HMGN1-217ENST00000489072 TRIM64A6NGJ6 449 aa21.87■■□□□ 1.09
HMGN1-217ENST00000489072 TRIM64BA6NI03 449 aa21.87■■□□□ 1.09
HMGN1-217ENST00000489072 OR6C65A6NJZ3 312 aa21.87■■□□□ 1.09
HMGN1-217ENST00000489072 CPSF4LA6NMK7 179 aaKnown RBP21.87■■□□□ 1.09
HMGN1-217ENST00000489072 LRRN3E7EW58 273 aa21.87■■□□□ 1.09
HMGN1-217ENST00000489072 MS4A18H0YCH9 400 aa21.87■■□□□ 1.09
HMGN1-217ENST00000489072 TRAF3IP2O43734 574 aaPredicted RBP21.87■■□□□ 1.09
HMGN1-217ENST00000489072 NPPAP01160 153 aa21.87■■□□□ 1.09
HMGN1-217ENST00000489072 CD8AP01732 235 aa21.87■■□□□ 1.09
HMGN1-217ENST00000489072 INHBBP09529 407 aa21.87■■□□□ 1.09
HMGN1-217ENST00000489072 MDH1P40925 334 aaKnown RBP21.87■■□□□ 1.09
HMGN1-217ENST00000489072 ATP5J2P56134 94 aa21.87■■□□□ 1.09
HMGN1-217ENST00000489072 MS4A18Q3C1V0 323 aa21.87■■□□□ 1.09
HMGN1-217ENST00000489072 WDR88Q6ZMY6 472 aa21.87■■□□□ 1.09
HMGN1-217ENST00000489072 OR1K1Q8NGR3 316 aa21.87■■□□□ 1.09
HMGN1-217ENST00000489072 ECSITQ9BQ95 431 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms