RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 C1QTNF12Q5T7M4 302 aa20.12■□□□□ 0.81
COL9A3-213ENST00000489045 FAM69AQ5T7M9 428 aa20.12■□□□□ 0.81
COL9A3-213ENST00000489045 FAM91A1Q658Y4 838 aa20.12■□□□□ 0.81
COL9A3-213ENST00000489045 ULK3Q6PHR2 472 aa20.12■□□□□ 0.81
COL9A3-213ENST00000489045 C5orf46Q6UWT4 87 aa20.12■□□□□ 0.81
COL9A3-213ENST00000489045 LINGO2Q7L985 606 aa20.12■□□□□ 0.81
COL9A3-213ENST00000489045 RETREG3Q86VR2 466 aa20.12■□□□□ 0.81
COL9A3-213ENST00000489045 PTOV1Q86YD1 416 aa20.12■□□□□ 0.81
COL9A3-213ENST00000489045 ARMC8Q8IUR7 673 aa20.12■□□□□ 0.81
COL9A3-213ENST00000489045 FBXL14Q8N1E6 418 aa20.12■□□□□ 0.81
COL9A3-213ENST00000489045 DPP10Q8N608 796 aa20.12■□□□□ 0.81
COL9A3-213ENST00000489045 ZNF417Q8TAU3 575 aa20.12■□□□□ 0.81
COL9A3-213ENST00000489045 BOD1Q96IK1 185 aa20.12■□□□□ 0.81
COL9A3-213ENST00000489045 ZNF587Q96SQ5 575 aaPredicted RBP20.12■□□□□ 0.81
COL9A3-213ENST00000489045 CGREF1Q99674 301 aa20.12■□□□□ 0.81
COL9A3-213ENST00000489045 WFDC6Q9BQY6 131 aa20.12■□□□□ 0.81
COL9A3-213ENST00000489045 CACNG6Q9BXT2 260 aa20.12■□□□□ 0.81
COL9A3-213ENST00000489045 BARX1Q9HBU1 254 aaPredicted RBP20.12■□□□□ 0.81
COL9A3-213ENST00000489045 CBLN4Q9NTU7 201 aa20.12■□□□□ 0.81
COL9A3-213ENST00000489045 B3GAT1Q9P2W7 334 aa20.12■□□□□ 0.81
COL9A3-213ENST00000489045 SLC13A4Q9UKG4 626 aa20.12■□□□□ 0.81
COL9A3-213ENST00000489045 TRAV36DV7A0A075B6V5 113 aa20.11■□□□□ 0.81
COL9A3-213ENST00000489045 A0A0G2JND7 137 aa20.11■□□□□ 0.81
COL9A3-213ENST00000489045 OR6C65A6NJZ3 312 aa20.11■□□□□ 0.81
COL9A3-213ENST00000489045 AIM2O14862 343 aa20.11■□□□□ 0.81
COL9A3-213ENST00000489045 UPK3AO75631 287 aa20.11■□□□□ 0.81
COL9A3-213ENST00000489045 SERPINB7O75635 380 aa20.11■□□□□ 0.81
COL9A3-213ENST00000489045 SASH3O75995 380 aa20.11■□□□□ 0.81
COL9A3-213ENST00000489045 ZNF43P17038 809 aa20.11■□□□□ 0.81
COL9A3-213ENST00000489045 PCSK6P29122 969 aa20.11■□□□□ 0.81
COL9A3-213ENST00000489045 FABP6P51161 128 aa20.11■□□□□ 0.81
COL9A3-213ENST00000489045 MTPNP58546 118 aa20.11■□□□□ 0.81
COL9A3-213ENST00000489045 DMTNQ08495 405 aa20.11■□□□□ 0.81
COL9A3-213ENST00000489045 CYP51A1Q16850 503 aa20.11■□□□□ 0.81
COL9A3-213ENST00000489045 TBRG1Q3YBR2 411 aa20.11■□□□□ 0.81
COL9A3-213ENST00000489045 MUC15Q8N387 334 aa20.11■□□□□ 0.81
COL9A3-213ENST00000489045 C11orf65Q8NCR3 313 aa20.11■□□□□ 0.81
COL9A3-213ENST00000489045 MAPK1IP1LQ8NDC0 245 aa20.11■□□□□ 0.81
COL9A3-213ENST00000489045 BHLHE22Q8NFJ8 381 aaPredicted RBP20.11■□□□□ 0.81
COL9A3-213ENST00000489045 RNF217Q8TC41 542 aa20.11■□□□□ 0.81
COL9A3-213ENST00000489045 SLC47A1Q96FL8 570 aa20.11■□□□□ 0.81
COL9A3-213ENST00000489045 ANKRD27Q96NW4 1050 aa20.11■□□□□ 0.81
COL9A3-213ENST00000489045 OXGR1Q96P68 337 aa20.11■□□□□ 0.81
COL9A3-213ENST00000489045 FKRPQ9H9S5 495 aa20.11■□□□□ 0.81
COL9A3-213ENST00000489045 TMEM27Q9HBJ8 222 aa20.11■□□□□ 0.81
COL9A3-213ENST00000489045 SELENONQ9NZV5 590 aa20.11■□□□□ 0.81
COL9A3-213ENST00000489045 KLHL14Q9P2G3 628 aa20.11■□□□□ 0.81
COL9A3-213ENST00000489045 RCE1Q9Y256 329 aa20.11■□□□□ 0.81
COL9A3-213ENST00000489045 ATP23Q9Y6H3 246 aa20.11■□□□□ 0.81
COL9A3-213ENST00000489045 A0A0B4J2E0 115 aa20.1■□□□□ 0.81
COL9A3-213ENST00000489045 A0A1B0GX12 115 aa20.1■□□□□ 0.81
COL9A3-213ENST00000489045 ATP6V1G2-DDX39BF2Z307 99 aa20.1■□□□□ 0.81
COL9A3-213ENST00000489045 TPST2O60704 377 aa20.1■□□□□ 0.81
COL9A3-213ENST00000489045 MFN2O95140 757 aa20.1■□□□□ 0.81
COL9A3-213ENST00000489045 CBLP22681 906 aa20.1■□□□□ 0.81
COL9A3-213ENST00000489045 GRPRP30550 384 aa20.1■□□□□ 0.81
COL9A3-213ENST00000489045 PCBP3P57721 371 aaKnown RBP20.1■□□□□ 0.81
COL9A3-213ENST00000489045 OR1Q1Q15612 314 aa20.1■□□□□ 0.81
COL9A3-213ENST00000489045 NRF1Q16656 503 aa20.1■□□□□ 0.81
COL9A3-213ENST00000489045 SMYD1Q8NB12 490 aa20.1■□□□□ 0.81
COL9A3-213ENST00000489045 SIKE1Q9BRV8 207 aa20.1■□□□□ 0.81
COL9A3-213ENST00000489045 LINC00470Q9BZP3 86 aa20.1■□□□□ 0.81
COL9A3-213ENST00000489045 OBP2BQ9NPH6 170 aa20.1■□□□□ 0.81
COL9A3-213ENST00000489045 ALPK2Q86TB3 2170 aa20.1■□□□□ 0.81
COL9A3-213ENST00000489045 A0A087WUJ7 227 aa20.09■□□□□ 0.81
COL9A3-213ENST00000489045 ZNF432O94892 652 aa20.09■□□□□ 0.81
COL9A3-213ENST00000489045 OPN1SWP03999 348 aa20.09■□□□□ 0.81
COL9A3-213ENST00000489045 IL1RL1Q01638 556 aa20.09■□□□□ 0.81
COL9A3-213ENST00000489045 ROR2Q01974 943 aaKnown RBP20.09■□□□□ 0.81
COL9A3-213ENST00000489045 RBBP4Q09028 425 aa20.09■□□□□ 0.81
COL9A3-213ENST00000489045 C1DQ13901 141 aaKnown RBP20.09■□□□□ 0.81
COL9A3-213ENST00000489045 NFYCQ13952 458 aa20.09■□□□□ 0.81
COL9A3-213ENST00000489045 HMBOX1Q6NT76 420 aa20.09■□□□□ 0.81
COL9A3-213ENST00000489045 ZNF544Q6NX49 715 aa20.09■□□□□ 0.81
COL9A3-213ENST00000489045 DNM1P46Q6ZS02 220 aa20.09■□□□□ 0.81
COL9A3-213ENST00000489045 H1FNTQ75WM6 255 aaPredicted RBP20.09■□□□□ 0.81
COL9A3-213ENST00000489045 RANBP3LQ86VV4 465 aaPredicted RBP20.09■□□□□ 0.81
COL9A3-213ENST00000489045 BCL2L2Q92843 193 aaPredicted RBP20.09■□□□□ 0.81
COL9A3-213ENST00000489045 ADAD1Q96M93 576 aaKnown RBP20.09■□□□□ 0.81
COL9A3-213ENST00000489045 REG4Q9BYZ8 158 aa20.09■□□□□ 0.81
COL9A3-213ENST00000489045 JMJD1CQ15652 2540 aa20.08■□□□□ 0.81
COL9A3-213ENST00000489045 INAFM1C9JVW0 142 aa20.08■□□□□ 0.81
COL9A3-213ENST00000489045 M0R3H8 397 aa20.08■□□□□ 0.81
COL9A3-213ENST00000489045 SSX4O60224 188 aa20.08■□□□□ 0.81
COL9A3-213ENST00000489045 SLC43A1O75387 559 aa20.08■□□□□ 0.81
COL9A3-213ENST00000489045 UBE2NP61088 152 aaKnown RBP20.08■□□□□ 0.81
COL9A3-213ENST00000489045 KRTAP1-1Q07627 177 aa20.08■□□□□ 0.81
COL9A3-213ENST00000489045 NET1Q7Z628 596 aaPredicted RBP20.08■□□□□ 0.81
COL9A3-213ENST00000489045 ADPRHL1Q8NDY3 354 aa20.08■□□□□ 0.81
COL9A3-213ENST00000489045 TSPEARQ8WU66 669 aa20.08■□□□□ 0.81
COL9A3-213ENST00000489045 EPYCQ99645 322 aa20.08■□□□□ 0.81
COL9A3-213ENST00000489045 NELFAQ9H3P2 528 aa20.08■□□□□ 0.81
COL9A3-213ENST00000489045 EVA1AQ9H8M9 152 aa20.08■□□□□ 0.81
COL9A3-213ENST00000489045 MOKQ9UQ07 419 aa20.08■□□□□ 0.81
COL9A3-213ENST00000489045 ABCA2Q9BZC7 2435 aa20.08■□□□□ 0.8
COL9A3-213ENST00000489045 A0A096LPE4 126 aa20.07■□□□□ 0.8
COL9A3-213ENST00000489045 IGHV1-18A0A0C4DH31 117 aa20.07■□□□□ 0.8
COL9A3-213ENST00000489045 A0A1W2PPZ6 126 aa20.07■□□□□ 0.8
COL9A3-213ENST00000489045 TRAF3IP2O43734 574 aaPredicted RBP20.07■□□□□ 0.8
COL9A3-213ENST00000489045 NUDT6P53370 316 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms