RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 MPGP29372 298 aa12.59□□□□□ -0.39
BRCA1-218ENST00000489037 NTF4P34130 210 aa12.59□□□□□ -0.39
BRCA1-218ENST00000489037 CLDN17P56750 224 aa12.59□□□□□ -0.39
BRCA1-218ENST00000489037 PSME3P61289 254 aa12.59□□□□□ -0.39
BRCA1-218ENST00000489037 NPTX1Q15818 432 aa12.59□□□□□ -0.39
BRCA1-218ENST00000489037 ACKR1Q16570 336 aa12.59□□□□□ -0.39
BRCA1-218ENST00000489037 TSPO2Q5TGU0 170 aa12.59□□□□□ -0.39
BRCA1-218ENST00000489037 DEF8Q6ZN54 512 aa12.59□□□□□ -0.39
BRCA1-218ENST00000489037 ZNF704Q6ZNC4 412 aaPredicted RBP12.59□□□□□ -0.39
BRCA1-218ENST00000489037 C20orf204Q6ZNR8 217 aa12.59□□□□□ -0.39
BRCA1-218ENST00000489037 HIST3H2AQ7L7L0 130 aa12.59□□□□□ -0.39
BRCA1-218ENST00000489037 LSRQ86X29 649 aaPredicted RBP12.59□□□□□ -0.39
BRCA1-218ENST00000489037 LURAP1LQ8IV03 231 aa12.59□□□□□ -0.39
BRCA1-218ENST00000489037 UEVLDQ8IX04 471 aa12.59□□□□□ -0.39
BRCA1-218ENST00000489037 KDM8Q8N371 416 aa12.59□□□□□ -0.39
BRCA1-218ENST00000489037 ZIC4Q8N9L1 334 aa12.59□□□□□ -0.39
BRCA1-218ENST00000489037 SCAIQ8N9R8 606 aa12.59□□□□□ -0.39
BRCA1-218ENST00000489037 ADPRHL1Q8NDY3 354 aa12.59□□□□□ -0.39
BRCA1-218ENST00000489037 OR4D11Q8NGI4 311 aa12.59□□□□□ -0.39
BRCA1-218ENST00000489037 HIST1H2ACQ93077 130 aa12.59□□□□□ -0.39
BRCA1-218ENST00000489037 MBD6Q96DN6 1003 aa12.59□□□□□ -0.39
BRCA1-218ENST00000489037 SLC41A3Q96GZ6 507 aa12.59□□□□□ -0.39
BRCA1-218ENST00000489037 LRRC37BQ96QE4 947 aa12.59□□□□□ -0.39
BRCA1-218ENST00000489037 PCDHAC1Q9H158 963 aa12.59□□□□□ -0.39
BRCA1-218ENST00000489037 ALG2Q9H553 416 aa12.59□□□□□ -0.39
BRCA1-218ENST00000489037 CSMD1Q96PZ7 3565 aa12.59□□□□□ -0.39
BRCA1-218ENST00000489037 ZNF587BE7ETH6 402 aa12.58□□□□□ -0.4
BRCA1-218ENST00000489037 CXCR6O00574 342 aa12.58□□□□□ -0.4
BRCA1-218ENST00000489037 SLC43A1O75387 559 aa12.58□□□□□ -0.4
BRCA1-218ENST00000489037 ATE1O95260 518 aa12.58□□□□□ -0.4
BRCA1-218ENST00000489037 BGLAPP02818 100 aa12.58□□□□□ -0.4
BRCA1-218ENST00000489037 PTNP21246 168 aa12.58□□□□□ -0.4
BRCA1-218ENST00000489037 PRRC2AP48634 2157 aaKnown RBP12.58□□□□□ -0.4
BRCA1-218ENST00000489037 CRYBA2P53672 197 aa12.58□□□□□ -0.4
BRCA1-218ENST00000489037 SELENOWP63302 87 aa12.58□□□□□ -0.4
BRCA1-218ENST00000489037 NCMAPQ5T1S8 102 aa12.58□□□□□ -0.4
BRCA1-218ENST00000489037 C1QTNF12Q5T7M4 302 aa12.58□□□□□ -0.4
BRCA1-218ENST00000489037 C9orf135Q5VTT2 229 aa12.58□□□□□ -0.4
BRCA1-218ENST00000489037 KLHL17Q6TDP4 642 aa12.58□□□□□ -0.4
BRCA1-218ENST00000489037 KLHL24Q6TFL4 600 aa12.58□□□□□ -0.4
BRCA1-218ENST00000489037 LINC00114Q6XXX2 140 aa12.58□□□□□ -0.4
BRCA1-218ENST00000489037 EPHX4Q8IUS5 362 aa12.58□□□□□ -0.4
BRCA1-218ENST00000489037 C1orf162Q8NEQ5 155 aaPredicted RBP12.58□□□□□ -0.4
BRCA1-218ENST00000489037 PIGTQ969N2 578 aa12.58□□□□□ -0.4
BRCA1-218ENST00000489037 MUS81Q96NY9 551 aa12.58□□□□□ -0.4
BRCA1-218ENST00000489037 HS3ST6Q96QI5 342 aa12.58□□□□□ -0.4
BRCA1-218ENST00000489037 KCTD14Q9BQ13 255 aaPredicted RBP12.58□□□□□ -0.4
BRCA1-218ENST00000489037 SLC19A3Q9BZV2 496 aa12.58□□□□□ -0.4
BRCA1-218ENST00000489037 BEX4Q9NWD9 120 aaPredicted RBP12.58□□□□□ -0.4
BRCA1-218ENST00000489037 MRPL39Q9NYK5 338 aaKnown RBP12.58□□□□□ -0.4
BRCA1-218ENST00000489037 ADA2Q9NZK5 511 aa12.58□□□□□ -0.4
BRCA1-218ENST00000489037 RCE1Q9Y256 329 aa12.58□□□□□ -0.4
BRCA1-218ENST00000489037 RNF115Q9Y4L5 304 aa12.58□□□□□ -0.4
BRCA1-218ENST00000489037 MED13LQ71F56 2210 aa12.57□□□□□ -0.4
BRCA1-218ENST00000489037 LOC102725191A0A1B0GVB3 256 aa12.57□□□□□ -0.4
BRCA1-218ENST00000489037 A0A1W2PPR1 153 aa12.57□□□□□ -0.4
BRCA1-218ENST00000489037 NME4O00746 187 aa12.57□□□□□ -0.4
BRCA1-218ENST00000489037 CLOCKO15516 846 aa12.57□□□□□ -0.4
BRCA1-218ENST00000489037 FZD7O75084 574 aa12.57□□□□□ -0.4
BRCA1-218ENST00000489037 OR5F1O95221 314 aa12.57□□□□□ -0.4
BRCA1-218ENST00000489037 ZNF682O95780 498 aa12.57□□□□□ -0.4
BRCA1-218ENST00000489037 ITGA5P08648 1049 aa12.57□□□□□ -0.4
BRCA1-218ENST00000489037 UMPSP11172 480 aa12.57□□□□□ -0.4
BRCA1-218ENST00000489037 CDH2P19022 906 aaPredicted RBP12.57□□□□□ -0.4
BRCA1-218ENST00000489037 AHCYP23526 432 aa12.57□□□□□ -0.4
BRCA1-218ENST00000489037 OR1E2P47887 323 aa12.57□□□□□ -0.4
BRCA1-218ENST00000489037 SELENOPP49908 381 aa12.57□□□□□ -0.4
BRCA1-218ENST00000489037 PUDPQ08623 228 aa12.57□□□□□ -0.4
BRCA1-218ENST00000489037 GABRA6Q16445 453 aa12.57□□□□□ -0.4
BRCA1-218ENST00000489037 DEFB113Q30KQ7 82 aa12.57□□□□□ -0.4
BRCA1-218ENST00000489037 HMBOX1Q6NT76 420 aa12.57□□□□□ -0.4
BRCA1-218ENST00000489037 PIGWQ7Z7B1 504 aa12.57□□□□□ -0.4
BRCA1-218ENST00000489037 GPR137CQ8N3F9 429 aa12.57□□□□□ -0.4
BRCA1-218ENST00000489037 C17orf78Q8N4C9 275 aa12.57□□□□□ -0.4
BRCA1-218ENST00000489037 PIK3C3Q8NEB9 887 aa12.57□□□□□ -0.4
BRCA1-218ENST00000489037 OR5J2Q8NH18 312 aa12.57□□□□□ -0.4
BRCA1-218ENST00000489037 OR52N5Q8NH56 324 aa12.57□□□□□ -0.4
BRCA1-218ENST00000489037 FAM162AQ96A26 154 aa12.57□□□□□ -0.4
BRCA1-218ENST00000489037 HS6ST2Q96MM7 605 aa12.57□□□□□ -0.4
BRCA1-218ENST00000489037 ALPK1Q96QP1 1244 aa12.57□□□□□ -0.4
BRCA1-218ENST00000489037 CCL19Q99731 98 aa12.57□□□□□ -0.4
BRCA1-218ENST00000489037 LINC00470Q9BZP3 86 aa12.57□□□□□ -0.4
BRCA1-218ENST00000489037 SPAG4Q9NPE6 437 aa12.57□□□□□ -0.4
BRCA1-218ENST00000489037 NANSQ9NR45 359 aa12.57□□□□□ -0.4
BRCA1-218ENST00000489037 SEC14L4Q9UDX3 406 aa12.57□□□□□ -0.4
BRCA1-218ENST00000489037 RIMS3Q9UJD0 308 aa12.57□□□□□ -0.4
BRCA1-218ENST00000489037 AMDHD2Q9Y303 409 aa12.57□□□□□ -0.4
BRCA1-218ENST00000489037 NOX1Q9Y5S8 564 aa12.57□□□□□ -0.4
BRCA1-218ENST00000489037 MAGED1Q9Y5V3 778 aaPredicted RBP12.57□□□□□ -0.4
BRCA1-218ENST00000489037 HRNRQ86YZ3 2850 aaPredicted RBP12.57□□□□□ -0.4
BRCA1-218ENST00000489037 ZNF726A6NNF4 738 aa12.56□□□□□ -0.4
BRCA1-218ENST00000489037 MS4A18H0YCH9 400 aa12.56□□□□□ -0.4
BRCA1-218ENST00000489037 PDLIM1O00151 329 aa12.56□□□□□ -0.4
BRCA1-218ENST00000489037 KPNA4O00629 521 aaPredicted RBP12.56□□□□□ -0.4
BRCA1-218ENST00000489037 SHOX2O60902 331 aaPredicted RBP12.56□□□□□ -0.4
BRCA1-218ENST00000489037 CH25HO95992 272 aa12.56□□□□□ -0.4
BRCA1-218ENST00000489037 WNT11O96014 354 aa12.56□□□□□ -0.4
BRCA1-218ENST00000489037 IFNW1P05000 195 aa12.56□□□□□ -0.4
BRCA1-218ENST00000489037 ADORA3P0DMS8 318 aa12.56□□□□□ -0.4
BRCA1-218ENST00000489037 THRBP10828 461 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms