RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 SAGP10523 405 aaPredicted RBP14□□□□□ -0.17
C9orf3-219ENST00000488186 RRM2P31350 389 aa14□□□□□ -0.17
C9orf3-219ENST00000488186 ASCL1P50553 236 aa14□□□□□ -0.17
C9orf3-219ENST00000488186 LTBQ06643 244 aa14□□□□□ -0.17
C9orf3-219ENST00000488186 PODNL1Q6PEZ8 512 aa14□□□□□ -0.17
C9orf3-219ENST00000488186 TBPL2Q6SJ96 375 aa14□□□□□ -0.17
C9orf3-219ENST00000488186 MBOAT2Q6ZWT7 520 aa14□□□□□ -0.17
C9orf3-219ENST00000488186 NANOGNBQ7Z5D8 188 aa14□□□□□ -0.17
C9orf3-219ENST00000488186 YTHDF3Q7Z739 585 aaKnown RBP14□□□□□ -0.17
C9orf3-219ENST00000488186 NRMQ8IXM6 262 aa14□□□□□ -0.17
C9orf3-219ENST00000488186 ADGRG5Q8IZF4 528 aa14□□□□□ -0.17
C9orf3-219ENST00000488186 OR5J2Q8NH18 312 aa14□□□□□ -0.17
C9orf3-219ENST00000488186 BPIFA2Q96DR5 249 aa14□□□□□ -0.17
C9orf3-219ENST00000488186 OXGR1Q96P68 337 aa14□□□□□ -0.17
C9orf3-219ENST00000488186 RBM24Q9BX46 236 aaKnown RBP14□□□□□ -0.17
C9orf3-219ENST00000488186 MEPEQ9NQ76 525 aaPredicted RBP14□□□□□ -0.17
C9orf3-219ENST00000488186 MAN2C1Q9NTJ4 1040 aa14□□□□□ -0.17
C9orf3-219ENST00000488186 MRPL39Q9NYK5 338 aaKnown RBP14□□□□□ -0.17
C9orf3-219ENST00000488186 UTP20O75691 2785 aaKnown RBP14□□□□□ -0.17
C9orf3-219ENST00000488186 SETXQ7Z333 2677 aaKnown RBP14□□□□□ -0.17
C9orf3-219ENST00000488186 MED12LQ86YW9 2145 aa14□□□□□ -0.17
C9orf3-219ENST00000488186 IGKV3D-15A0A087WSY6 115 aa13.99□□□□□ -0.17
C9orf3-219ENST00000488186 A0A087WUU8 490 aa13.99□□□□□ -0.17
C9orf3-219ENST00000488186 ZNF716A6NP11 495 aa13.99□□□□□ -0.17
C9orf3-219ENST00000488186 BLOC1S5-TXNDC5H3BN57 136 aa13.99□□□□□ -0.17
C9orf3-219ENST00000488186 TNFRSF11BO00300 401 aa13.99□□□□□ -0.17
C9orf3-219ENST00000488186 MSTNO14793 375 aa13.99□□□□□ -0.17
C9orf3-219ENST00000488186 RNF13O43567 381 aa13.99□□□□□ -0.17
C9orf3-219ENST00000488186 PIP5K1CO60331 668 aa13.99□□□□□ -0.17
C9orf3-219ENST00000488186 RAMP1O60894 148 aa13.99□□□□□ -0.17
C9orf3-219ENST00000488186 CST1P01037 141 aa13.99□□□□□ -0.17
C9orf3-219ENST00000488186 IGF2P01344 180 aa13.99□□□□□ -0.17
C9orf3-219ENST00000488186 CD8BP10966 210 aa13.99□□□□□ -0.17
C9orf3-219ENST00000488186 UQCRC1P31930 480 aa13.99□□□□□ -0.17
C9orf3-219ENST00000488186 IFNGR2P38484 337 aa13.99□□□□□ -0.17
C9orf3-219ENST00000488186 SLC16A1P53985 500 aa13.99□□□□□ -0.17
C9orf3-219ENST00000488186 PRKCDQ05655 676 aa13.99□□□□□ -0.17
C9orf3-219ENST00000488186 SLC17A1Q14916 467 aa13.99□□□□□ -0.17
C9orf3-219ENST00000488186 GUSBP1Q15486 140 aa13.99□□□□□ -0.17
C9orf3-219ENST00000488186 CDSNQ15517 529 aa13.99□□□□□ -0.17
C9orf3-219ENST00000488186 TAF11Q15544 211 aa13.99□□□□□ -0.17
C9orf3-219ENST00000488186 EXOC3L2Q2M3D2 409 aa13.99□□□□□ -0.17
C9orf3-219ENST00000488186 NUFIP2Q7Z417 695 aaKnown RBP13.99□□□□□ -0.17
C9orf3-219ENST00000488186 UEVLDQ8IX04 471 aa13.99□□□□□ -0.17
C9orf3-219ENST00000488186 UBE2J2Q8N2K1 259 aa13.99□□□□□ -0.17
C9orf3-219ENST00000488186 KDM8Q8N371 416 aa13.99□□□□□ -0.17
C9orf3-219ENST00000488186 ZNF610Q8N9Z0 462 aa13.99□□□□□ -0.17
C9orf3-219ENST00000488186 RELL2Q8NC24 303 aaPredicted RBP13.99□□□□□ -0.17
C9orf3-219ENST00000488186 ADPRHL1Q8NDY3 354 aa13.99□□□□□ -0.17
C9orf3-219ENST00000488186 OR9K2Q8NGE7 335 aa13.99□□□□□ -0.17
C9orf3-219ENST00000488186 SLC7A13Q8TCU3 470 aa13.99□□□□□ -0.17
C9orf3-219ENST00000488186 ALPK1Q96QP1 1244 aa13.99□□□□□ -0.17
C9orf3-219ENST00000488186 OPN3Q9H1Y3 402 aaPredicted RBP13.99□□□□□ -0.17
C9orf3-219ENST00000488186 REEP1Q9H902 201 aa13.99□□□□□ -0.17
C9orf3-219ENST00000488186 PLSCR4Q9NRQ2 329 aa13.99□□□□□ -0.17
C9orf3-219ENST00000488186 C20orf141Q9NUB4 165 aa13.99□□□□□ -0.17
C9orf3-219ENST00000488186 SEC14L4Q9UDX3 406 aa13.99□□□□□ -0.17
C9orf3-219ENST00000488186 PLEKHB1Q9UF11 243 aaPredicted RBP13.99□□□□□ -0.17
C9orf3-219ENST00000488186 TMEM5Q9Y2B1 443 aa13.99□□□□□ -0.17
C9orf3-219ENST00000488186 MPDZO75970 2070 aa13.99□□□□□ -0.17
C9orf3-219ENST00000488186 TCRBV3S1A0A5B6 114 aa13.98□□□□□ -0.17
C9orf3-219ENST00000488186 EFCAB9A8MZ26 197 aa13.98□□□□□ -0.17
C9orf3-219ENST00000488186 C11orf98E9PRG8 122 aa13.98□□□□□ -0.17
C9orf3-219ENST00000488186 PLPP3O14495 311 aa13.98□□□□□ -0.17
C9orf3-219ENST00000488186 AKAP8O43823 692 aaKnown RBP13.98□□□□□ -0.17
C9orf3-219ENST00000488186 SERPINI2O75830 405 aa13.98□□□□□ -0.17
C9orf3-219ENST00000488186 MAGEA2P43356 314 aa13.98□□□□□ -0.17
C9orf3-219ENST00000488186 PUDPQ08623 228 aa13.98□□□□□ -0.17
C9orf3-219ENST00000488186 ZSCAN26Q16670 478 aa13.98□□□□□ -0.17
C9orf3-219ENST00000488186 IQCCQ4KMZ1 466 aa13.98□□□□□ -0.17
C9orf3-219ENST00000488186 OR2T5Q6IEZ7 315 aa13.98□□□□□ -0.17
C9orf3-219ENST00000488186 CASP12Q6UXS9 341 aa13.98□□□□□ -0.17
C9orf3-219ENST00000488186 BEND4Q6ZU67 534 aa13.98□□□□□ -0.17
C9orf3-219ENST00000488186 CREB3L2Q70SY1 520 aa13.98□□□□□ -0.17
C9orf3-219ENST00000488186 AAED1Q7RTV5 226 aa13.98□□□□□ -0.17
C9orf3-219ENST00000488186 C10orf67Q8IYJ2 551 aa13.98□□□□□ -0.17
C9orf3-219ENST00000488186 LRRC17Q8N6Y2 441 aa13.98□□□□□ -0.17
C9orf3-219ENST00000488186 OR2T29Q8NH02 315 aa13.98□□□□□ -0.17
C9orf3-219ENST00000488186 FOXD3Q9UJU5 478 aaPredicted RBP13.98□□□□□ -0.17
C9orf3-219ENST00000488186 FLVCR1Q9Y5Y0 555 aa13.98□□□□□ -0.17
C9orf3-219ENST00000488186 TRBV4-1A0A0J9YWV2 114 aa13.97□□□□□ -0.17
C9orf3-219ENST00000488186 A8MXE2 369 aa13.97□□□□□ -0.17
C9orf3-219ENST00000488186 MS4A18H0YCH9 400 aa13.97□□□□□ -0.17
C9orf3-219ENST00000488186 OR10H3O60404 316 aa13.97□□□□□ -0.17
C9orf3-219ENST00000488186 KRT33AO76009 404 aa13.97□□□□□ -0.17
C9orf3-219ENST00000488186 CLDN1O95832 211 aa13.97□□□□□ -0.17
C9orf3-219ENST00000488186 FUT4P22083 530 aa13.97□□□□□ -0.17
C9orf3-219ENST00000488186 P2RY4P51582 365 aa13.97□□□□□ -0.17
C9orf3-219ENST00000488186 POU4F3Q15319 338 aa13.97□□□□□ -0.17
C9orf3-219ENST00000488186 MS4A18Q3C1V0 323 aa13.97□□□□□ -0.17
C9orf3-219ENST00000488186 OAFQ86UD1 273 aa13.97□□□□□ -0.17
C9orf3-219ENST00000488186 KIF18BQ86Y91 864 aa13.97□□□□□ -0.17
C9orf3-219ENST00000488186 LINC00471Q8N535 108 aa13.97□□□□□ -0.17
C9orf3-219ENST00000488186 OR4K5Q8NGD3 323 aa13.97□□□□□ -0.17
C9orf3-219ENST00000488186 RNASE6Q93091 150 aaKnown RBP13.97□□□□□ -0.17
C9orf3-219ENST00000488186 APH1AQ96BI3 265 aa13.97□□□□□ -0.17
C9orf3-219ENST00000488186 DHRS1Q96LJ7 313 aa13.97□□□□□ -0.17
C9orf3-219ENST00000488186 NDEL1Q9GZM8 345 aa13.97□□□□□ -0.17
C9orf3-219ENST00000488186 CCM2LQ9NUG4 571 aaPredicted RBP13.97□□□□□ -0.17
C9orf3-219ENST00000488186 UPB1Q9UBR1 384 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms