RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 PTGFRNQ9P2B2 879 aa4.36□□□□□ -1.71
CDC42BPA-213ENST00000488131 KLHL9Q9P2J3 617 aa4.36□□□□□ -1.71
CDC42BPA-213ENST00000488131 NUP214P35658 2090 aaPredicted RBP4.36□□□□□ -1.71
CDC42BPA-213ENST00000488131 WDR90Q96KV7 1748 aa4.36□□□□□ -1.71
CDC42BPA-213ENST00000488131 IGLV3-10A0A075B6K4 115 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 TBC1D3DA0A087WVF3 549 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 TBC1D3IA0A087WXS9 549 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 TBC1D3EA0A087X179 549 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 TBC1D3KA0A087X1G2 549 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 A0A1B0GTI1 187 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 GSAPA4D1B5 854 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 BTBD17A6NE02 478 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 TBC1D3FA6NER0 549 aaPredicted RBP4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 URADA6NGE7 173 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 IFITM10A6NMD0 228 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 MARCH11A6NNE9 402 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 IDSB3KWA1 339 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 TBC1D3LB9A6J9 549 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 E7EQ34 232 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 F8VVB4 439 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 F8VWA3 439 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 RPL36A-HNRNPH2H7BZ11 118 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 GOSR2O14653 212 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 PLPP2O43688 288 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 B4GALT3O60512 393 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 UGDHO60701 494 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 NME6O75414 186 aaPredicted RBP4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 FGF19O95750 216 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 PTBP3O95758 552 aaKnown RBP4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 MOCS2O96007 188 aaPredicted RBP4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 CD2P06729 351 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 HEXBP07686 556 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 MELTFP08582 738 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 IL3P08700 152 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 HKR1P10072 659 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 PF4V1P10720 104 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 KCNE1P15382 129 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 ZNF14P17017 642 aaPredicted RBP4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 RAB5AP20339 215 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 DGKAP23743 735 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 MMP11P24347 488 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 HTR1FP30939 366 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 CRATP43155 626 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 GLP1RP43220 463 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 CDX1P47902 265 aaPredicted RBP4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 SLC6A12P48065 614 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 CASP6P55212 293 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 CDH11P55287 796 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 TAS2R43P59537 309 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 HNRNPKP61978 463 aaKnown RBP eCLIP4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 SORDQ00796 357 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 NAAAQ02083 359 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 PJVKQ0ZLH3 352 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 DDX39BQ13838 428 aaKnown RBP4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 ARHGEF7Q14155 803 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 HNF4GQ14541 408 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 PNLIPRP3Q17RR3 467 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 VWA2Q5GFL6 755 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 XKR4Q5GH76 650 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 SLC35D3Q5M8T2 416 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 LY6G6FQ5SQ64 297 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 TMEM240Q5SV17 173 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 ATXN7L2Q5T6C5 722 aaPredicted RBP4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 PHF19Q5T6S3 580 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 MFSD14CQ5VZR4 134 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 LIPJQ5W064 366 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 C18orf63Q68DL7 685 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 OR52W1Q6IF63 320 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 TBC1D3CQ6IPX1 549 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 RAB12Q6IQ22 244 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 TMEM71Q6P5X7 295 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 PRSS55Q6UWB4 352 aaPredicted RBP4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 APOOLQ6UXV4 268 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 GLT6D1Q7Z4J2 308 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 SCD5Q86SK9 330 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 NUDT13Q86X67 352 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 TBC1D3Q8IZP1 549 aaPredicted RBP4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 ZBTB2Q8N680 514 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 ZNF383Q8NA42 475 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 MORN4Q8NDC4 146 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 SLC30A7Q8NEW0 376 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 GPR32P1Q8NGA4 272 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 OR52I2Q8NH67 350 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 C15orf40Q8WUR7 153 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 TRAPPC12Q8WVT3 735 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 RAB24Q969Q5 203 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 PSMG2Q969U7 264 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 R3HDM4Q96D70 268 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 ECHDC3Q96DC8 303 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 C14orf79Q96F83 325 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 ZNF75AQ96N20 296 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 DIRC2Q96SL1 478 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 PKP4Q99569 1192 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 TIMP4Q99727 224 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 EGFL8Q99944 293 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 MGME1Q9BQP7 344 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 NAA11Q9BSU3 229 aaPredicted RBP4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 EBPLQ9BY08 206 aa4.35□□□□□ -1.71
CDC42BPA-213ENST00000488131 C1orf198Q9H425 327 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms