RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 EDC4Q6P2E9 1401 aaKnown RBP2.53□□□□□ -2
TTC3-220ENST00000487711 YTHDC2Q9H6S0 1430 aaKnown RBP2.53□□□□□ -2
TTC3-220ENST00000487711 PIK3R4Q99570 1358 aa2.53□□□□□ -2
TTC3-220ENST00000487711 XPO1O14980 1071 aaKnown RBP2.53□□□□□ -2
TTC3-220ENST00000487711 MSH4O15457 936 aa2.53□□□□□ -2
TTC3-220ENST00000487711 KLHL41O60662 606 aa2.53□□□□□ -2
TTC3-220ENST00000487711 RHOBTB1O94844 696 aa2.53□□□□□ -2
TTC3-220ENST00000487711 MMP1P03956 469 aa2.53□□□□□ -2
TTC3-220ENST00000487711 EPB41P11171 864 aaKnown RBP2.53□□□□□ -2
TTC3-220ENST00000487711 HTR1FP30939 366 aa2.53□□□□□ -2
TTC3-220ENST00000487711 TAGLN2P37802 199 aaKnown RBP2.53□□□□□ -2
TTC3-220ENST00000487711 PPOXP50336 477 aa2.53□□□□□ -2
TTC3-220ENST00000487711 PLA2G16P53816 162 aa2.53□□□□□ -2
TTC3-220ENST00000487711 BIDP55957 195 aa2.53□□□□□ -2
TTC3-220ENST00000487711 GBE1Q04446 702 aa2.53□□□□□ -2
TTC3-220ENST00000487711 MRPL28Q13084 256 aaKnown RBP2.53□□□□□ -2
TTC3-220ENST00000487711 CCDC152Q4G0S7 254 aa2.53□□□□□ -2
TTC3-220ENST00000487711 NCR3LG1Q68D85 454 aa2.53□□□□□ -2
TTC3-220ENST00000487711 ACOT1Q86TX2 421 aa2.53□□□□□ -2
TTC3-220ENST00000487711 CDH26Q8IXH8 852 aa2.53□□□□□ -2
TTC3-220ENST00000487711 CENPLQ8N0S6 344 aaPredicted RBP2.53□□□□□ -2
TTC3-220ENST00000487711 ZNF786Q8N393 782 aa2.53□□□□□ -2
TTC3-220ENST00000487711 SVOPLQ8N434 492 aa2.53□□□□□ -2
TTC3-220ENST00000487711 OR5L2Q8NGL0 311 aa2.53□□□□□ -2
TTC3-220ENST00000487711 OR13C2Q8NGS9 318 aa2.53□□□□□ -2
TTC3-220ENST00000487711 OR56B4Q8NH76 319 aa2.53□□□□□ -2
TTC3-220ENST00000487711 STARD4Q96DR4 205 aa2.53□□□□□ -2
TTC3-220ENST00000487711 PSKH2Q96QS6 385 aa2.53□□□□□ -2
TTC3-220ENST00000487711 GNG12Q9UBI6 72 aa2.53□□□□□ -2
TTC3-220ENST00000487711 MTRF1LQ9UGC7 380 aaKnown RBP2.53□□□□□ -2
TTC3-220ENST00000487711 CHRNA9Q9UGM1 479 aa2.53□□□□□ -2
TTC3-220ENST00000487711 MYO5BQ9ULV0 1848 aa2.53□□□□□ -2
TTC3-220ENST00000487711 A2ML1A8K2U0 1454 aa2.52□□□□□ -2.01
TTC3-220ENST00000487711 CD163L1Q9NR16 1453 aa2.52□□□□□ -2.01
TTC3-220ENST00000487711 MTCL1Q9Y4B5 1905 aaKnown RBP2.52□□□□□ -2.01
TTC3-220ENST00000487711 CPSF1Q10570 1443 aaKnown RBP2.52□□□□□ -2.01
TTC3-220ENST00000487711 SF3B1O75533 1304 aaKnown RBP eCLIP2.52□□□□□ -2.01
TTC3-220ENST00000487711 UBR1Q8IWV7 1749 aa2.52□□□□□ -2.01
TTC3-220ENST00000487711 C15orf38-AP3S2A0A0A6YYH1 394 aa2.52□□□□□ -2.01
TTC3-220ENST00000487711 VSTM2BA6NLU5 285 aa2.52□□□□□ -2.01
TTC3-220ENST00000487711 FAM166BA8MTA8 275 aa2.52□□□□□ -2.01
TTC3-220ENST00000487711 G3V4G9 280 aa2.52□□□□□ -2.01
TTC3-220ENST00000487711 GFYI3L273 518 aa2.52□□□□□ -2.01
TTC3-220ENST00000487711 MTX2O75431 263 aa2.52□□□□□ -2.01
TTC3-220ENST00000487711 P04436 131 aa2.52□□□□□ -2.01
TTC3-220ENST00000487711 RBMY1CP0DJD4 496 aa2.52□□□□□ -2.01
TTC3-220ENST00000487711 RCC1P18754 421 aaPredicted RBP2.52□□□□□ -2.01
TTC3-220ENST00000487711 ANXA13P27216 316 aa2.52□□□□□ -2.01
TTC3-220ENST00000487711 GDI1P31150 447 aa2.52□□□□□ -2.01
TTC3-220ENST00000487711 HPCAL1P37235 193 aa2.52□□□□□ -2.01
TTC3-220ENST00000487711 LEPP41159 167 aa2.52□□□□□ -2.01
TTC3-220ENST00000487711 CSNK1DP48730 415 aa2.52□□□□□ -2.01
TTC3-220ENST00000487711 AP3M2P53677 418 aa2.52□□□□□ -2.01
TTC3-220ENST00000487711 SELENOTP62341 195 aa2.52□□□□□ -2.01
TTC3-220ENST00000487711 MAP2K1Q02750 393 aaPredicted RBP2.52□□□□□ -2.01
TTC3-220ENST00000487711 CCDC57Q2TAC2 916 aa2.52□□□□□ -2.01
TTC3-220ENST00000487711 TRIM16LQ309B1 348 aa2.52□□□□□ -2.01
TTC3-220ENST00000487711 TPGS2Q68CL5 300 aa2.52□□□□□ -2.01
TTC3-220ENST00000487711 CCDC73Q6ZRK6 1079 aa2.52□□□□□ -2.01
TTC3-220ENST00000487711 PNKDQ8N490 385 aa2.52□□□□□ -2.01
TTC3-220ENST00000487711 MARCH1Q8TCQ1 289 aa2.52□□□□□ -2.01
TTC3-220ENST00000487711 BRSK1Q8TDC3 778 aa2.52□□□□□ -2.01
TTC3-220ENST00000487711 RLN3Q8WXF3 142 aa2.52□□□□□ -2.01
TTC3-220ENST00000487711 CTNNBL1Q8WYA6 563 aaPredicted RBP2.52□□□□□ -2.01
TTC3-220ENST00000487711 CHCHD10Q8WYQ3 142 aaPredicted RBP2.52□□□□□ -2.01
TTC3-220ENST00000487711 SECISBP2Q96T21 854 aaKnown RBP2.52□□□□□ -2.01
TTC3-220ENST00000487711 CCT7Q99832 543 aa2.52□□□□□ -2.01
TTC3-220ENST00000487711 RASL11BQ9BPW5 248 aa2.52□□□□□ -2.01
TTC3-220ENST00000487711 NCOR1P1Q9H4R4 102 aa2.52□□□□□ -2.01
TTC3-220ENST00000487711 SMYD3Q9H7B4 428 aa2.52□□□□□ -2.01
TTC3-220ENST00000487711 PATZ1Q9HBE1 687 aaKnown RBP2.52□□□□□ -2.01
TTC3-220ENST00000487711 C6orf203Q9P0P8 240 aaPredicted RBP2.52□□□□□ -2.01
TTC3-220ENST00000487711 PTBP2Q9UKA9 531 aaKnown RBP2.52□□□□□ -2.01
TTC3-220ENST00000487711 NEUROG3Q9Y4Z2 214 aa2.52□□□□□ -2.01
TTC3-220ENST00000487711 COL4A4P53420 1690 aaPredicted RBP2.52□□□□□ -2.01
TTC3-220ENST00000487711 PHRF1Q9P1Y6 1649 aaKnown RBP2.52□□□□□ -2.01
TTC3-220ENST00000487711 SLIT1O75093 1534 aa2.52□□□□□ -2.01
TTC3-220ENST00000487711 OBSCNQ5VST9 7968 aa2.51□□□□□ -2.01
TTC3-220ENST00000487711 ATP10DQ9P241 1426 aa2.51□□□□□ -2.01
TTC3-220ENST00000487711 RGPD1P0DJD0 1748 aa2.51□□□□□ -2.01
TTC3-220ENST00000487711 A0A1W2PP64 1363 aa2.51□□□□□ -2.01
TTC3-220ENST00000487711 ARHGEF10O15013 1369 aa2.51□□□□□ -2.01
TTC3-220ENST00000487711 IBTKQ9P2D0 1353 aaPredicted RBP2.51□□□□□ -2.01
TTC3-220ENST00000487711 LRRC37A3O60309 1634 aa2.51□□□□□ -2.01
TTC3-220ENST00000487711 IGHV3OR16-13A0A075B7E8 117 aa2.51□□□□□ -2.01
TTC3-220ENST00000487711 K7EQM0 130 aa2.51□□□□□ -2.01
TTC3-220ENST00000487711 SGK1O00141 431 aa2.51□□□□□ -2.01
TTC3-220ENST00000487711 SURF6O75683 361 aaKnown RBP2.51□□□□□ -2.01
TTC3-220ENST00000487711 LRATO95237 230 aa2.51□□□□□ -2.01
TTC3-220ENST00000487711 CAPN1P07384 714 aa2.51□□□□□ -2.01
TTC3-220ENST00000487711 H2BFMP0C1H6 154 aa2.51□□□□□ -2.01
TTC3-220ENST00000487711 ATP6V1B2P21281 511 aa2.51□□□□□ -2.01
TTC3-220ENST00000487711 FGF9P31371 208 aaPredicted RBP2.51□□□□□ -2.01
TTC3-220ENST00000487711 YWHABP31946 246 aaKnown RBP2.51□□□□□ -2.01
TTC3-220ENST00000487711 ACADVLP49748 655 aa2.51□□□□□ -2.01
TTC3-220ENST00000487711 SH3BGRP55822 239 aaPredicted RBP2.51□□□□□ -2.01
TTC3-220ENST00000487711 TNFRSF17Q02223 184 aa2.51□□□□□ -2.01
TTC3-220ENST00000487711 TGFBR3Q03167 851 aa2.51□□□□□ -2.01
TTC3-220ENST00000487711 CSTF1Q05048 431 aaKnown RBP2.51□□□□□ -2.01
TTC3-220ENST00000487711 PJVKQ0ZLH3 352 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms