RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 COA6Q5JTJ3 125 aaKnown RBP2.55□□□□□ -2
HMGB1P36-201ENST00000487709 NANOGNBQ7Z5D8 188 aa2.55□□□□□ -2
HMGB1P36-201ENST00000487709 ZNF546Q86UE3 836 aa2.55□□□□□ -2
HMGB1P36-201ENST00000487709 EIF1ADQ8N9N8 165 aaKnown RBP2.55□□□□□ -2
HMGB1P36-201ENST00000487709 OR10G9Q8NGN4 311 aa2.55□□□□□ -2
HMGB1P36-201ENST00000487709 MAGEE2Q8TD90 523 aaPredicted RBP2.55□□□□□ -2
HMGB1P36-201ENST00000487709 CMTM7Q96FZ5 175 aa2.55□□□□□ -2
HMGB1P36-201ENST00000487709 KCTD14Q9BQ13 255 aaPredicted RBP2.55□□□□□ -2
HMGB1P36-201ENST00000487709 PELOQ9BRX2 385 aaKnown RBP2.55□□□□□ -2
HMGB1P36-201ENST00000487709 HES7Q9BYE0 225 aa2.55□□□□□ -2
HMGB1P36-201ENST00000487709 OR11A1Q9GZK7 315 aa2.55□□□□□ -2
HMGB1P36-201ENST00000487709 C20orf85Q9H1P6 137 aa2.55□□□□□ -2
HMGB1P36-201ENST00000487709 PDS5BQ9NTI5 1447 aa2.55□□□□□ -2
HMGB1P36-201ENST00000487709 EXD2Q9NVH0 621 aa2.55□□□□□ -2
HMGB1P36-201ENST00000487709 GIN1Q9NXP7 522 aa2.55□□□□□ -2
HMGB1P36-201ENST00000487709 IKZF2Q9UKS7 526 aa2.55□□□□□ -2
HMGB1P36-201ENST00000487709 KCNIP3Q9Y2W7 256 aa2.55□□□□□ -2
HMGB1P36-201ENST00000487709 NPTNQ9Y639 398 aa2.55□□□□□ -2
HMGB1P36-201ENST00000487709 IKBKGQ9Y6K9 419 aa2.55□□□□□ -2
HMGB1P36-201ENST00000487709 A0A1B0GVL5 298 aa2.54□□□□□ -2
HMGB1P36-201ENST00000487709 NKX2-6A6NCS4 301 aa2.54□□□□□ -2
HMGB1P36-201ENST00000487709 A6NDX4 124 aa2.54□□□□□ -2
HMGB1P36-201ENST00000487709 SNTNA6NMZ2 147 aa2.54□□□□□ -2
HMGB1P36-201ENST00000487709 SOX15O60248 233 aa2.54□□□□□ -2
HMGB1P36-201ENST00000487709 MGRN1O60291 552 aa2.54□□□□□ -2
HMGB1P36-201ENST00000487709 ZNF861PO60384 105 aa2.54□□□□□ -2
HMGB1P36-201ENST00000487709 B4GALT2O60909 372 aa2.54□□□□□ -2
HMGB1P36-201ENST00000487709 IL1BP01584 269 aa2.54□□□□□ -2
HMGB1P36-201ENST00000487709 ZNF17P17021 662 aa2.54□□□□□ -2
HMGB1P36-201ENST00000487709 TCN1P20061 433 aaPredicted RBP2.54□□□□□ -2
HMGB1P36-201ENST00000487709 MX1P20591 662 aa2.54□□□□□ -2
HMGB1P36-201ENST00000487709 CD1CP29017 333 aa2.54□□□□□ -2
HMGB1P36-201ENST00000487709 RORAP35398 523 aa2.54□□□□□ -2
HMGB1P36-201ENST00000487709 NUDT1P36639 197 aa2.54□□□□□ -2
HMGB1P36-201ENST00000487709 ATP5IP56385 69 aaPredicted RBP2.54□□□□□ -2
HMGB1P36-201ENST00000487709 RPL23AP62750 156 aaKnown RBP2.54□□□□□ -2
HMGB1P36-201ENST00000487709 CAPRIN1Q14444 709 aaKnown RBP2.54□□□□□ -2
HMGB1P36-201ENST00000487709 ARHGAP19Q14CB8 494 aa2.54□□□□□ -2
HMGB1P36-201ENST00000487709 SSX2Q16385 188 aa2.54□□□□□ -2
HMGB1P36-201ENST00000487709 ZNF630Q2M218 657 aaPredicted RBP2.54□□□□□ -2
HMGB1P36-201ENST00000487709 KCTD21Q4G0X4 260 aa2.54□□□□□ -2
HMGB1P36-201ENST00000487709 GPRC6AQ5T6X5 926 aa2.54□□□□□ -2
HMGB1P36-201ENST00000487709 CYB5R2Q6BCY4 276 aa2.54□□□□□ -2
HMGB1P36-201ENST00000487709 KDELC1Q6UW63 502 aa2.54□□□□□ -2
HMGB1P36-201ENST00000487709 ENPP6Q6UWR7 440 aa2.54□□□□□ -2
HMGB1P36-201ENST00000487709 TIFABQ6ZNK6 161 aa2.54□□□□□ -2
HMGB1P36-201ENST00000487709 H2BFWTQ7Z2G1 175 aa2.54□□□□□ -2
HMGB1P36-201ENST00000487709 PAQR7Q86WK9 346 aa2.54□□□□□ -2
HMGB1P36-201ENST00000487709 ECHDC2Q86YB7 292 aa2.54□□□□□ -2
HMGB1P36-201ENST00000487709 ZNF679Q8IYX0 411 aa2.54□□□□□ -2
HMGB1P36-201ENST00000487709 UBE2J2Q8N2K1 259 aa2.54□□□□□ -2
HMGB1P36-201ENST00000487709 Q8N9W7 124 aa2.54□□□□□ -2
HMGB1P36-201ENST00000487709 OR52H1Q8NGJ2 320 aa2.54□□□□□ -2
HMGB1P36-201ENST00000487709 OR51G1Q8NGK1 321 aa2.54□□□□□ -2
HMGB1P36-201ENST00000487709 RNF138Q8WVD3 245 aa2.54□□□□□ -2
HMGB1P36-201ENST00000487709 ACOT11Q8WXI4 607 aaPredicted RBP2.54□□□□□ -2
HMGB1P36-201ENST00000487709 NDRG1Q92597 394 aaKnown RBP2.54□□□□□ -2
HMGB1P36-201ENST00000487709 ARPC1AQ92747 370 aa2.54□□□□□ -2
HMGB1P36-201ENST00000487709 MYDGFQ969H8 173 aa2.54□□□□□ -2
HMGB1P36-201ENST00000487709 ITCHQ96J02 903 aa2.54□□□□□ -2
HMGB1P36-201ENST00000487709 FCRL1Q96LA6 429 aa2.54□□□□□ -2
HMGB1P36-201ENST00000487709 MYCBPQ99417 103 aaPredicted RBP2.54□□□□□ -2
HMGB1P36-201ENST00000487709 CHRDL1Q9BU40 450 aa2.54□□□□□ -2
HMGB1P36-201ENST00000487709 GCOM2Q9BZD3 368 aaPredicted RBP2.54□□□□□ -2
HMGB1P36-201ENST00000487709 NMRAL1Q9HBL8 299 aa2.54□□□□□ -2
HMGB1P36-201ENST00000487709 QPCTLQ9NXS2 382 aa2.54□□□□□ -2
HMGB1P36-201ENST00000487709 RBMY1BA6NDE4 496 aaKnown RBP2.53□□□□□ -2
HMGB1P36-201ENST00000487709 RBMY1EA6NEQ0 496 aaKnown RBP2.53□□□□□ -2
HMGB1P36-201ENST00000487709 H0Y8G0 127 aa2.53□□□□□ -2
HMGB1P36-201ENST00000487709 MAGEB4O15481 346 aaPredicted RBP2.53□□□□□ -2
HMGB1P36-201ENST00000487709 RIPK2O43353 540 aa2.53□□□□□ -2
HMGB1P36-201ENST00000487709 SLC25A27O95847 323 aa2.53□□□□□ -2
HMGB1P36-201ENST00000487709 RBMY1DP0C7P1 496 aaKnown RBP2.53□□□□□ -2
HMGB1P36-201ENST00000487709 RBMY1A1P0DJD3 496 aaKnown RBP2.53□□□□□ -2
HMGB1P36-201ENST00000487709 ADRB3P13945 408 aa2.53□□□□□ -2
HMGB1P36-201ENST00000487709 CRISP2P16562 243 aa2.53□□□□□ -2
HMGB1P36-201ENST00000487709 MDKP21741 143 aaPredicted RBP2.53□□□□□ -2
HMGB1P36-201ENST00000487709 IFNA8P32881 189 aa2.53□□□□□ -2
HMGB1P36-201ENST00000487709 DDOSTP39656 456 aa2.53□□□□□ -2
HMGB1P36-201ENST00000487709 YAP1P46937 504 aaKnown RBP2.53□□□□□ -2
HMGB1P36-201ENST00000487709 SULT1E1P49888 294 aa2.53□□□□□ -2
HMGB1P36-201ENST00000487709 MNAT1P51948 309 aa2.53□□□□□ -2
HMGB1P36-201ENST00000487709 UGT2B15P54855 530 aa2.53□□□□□ -2
HMGB1P36-201ENST00000487709 HERVK_113P61574 105 aa2.53□□□□□ -2
HMGB1P36-201ENST00000487709 CDK16Q00536 496 aa2.53□□□□□ -2
HMGB1P36-201ENST00000487709 SMARCB1Q12824 385 aa2.53□□□□□ -2
HMGB1P36-201ENST00000487709 DAZ2Q13117 558 aaKnown RBP2.53□□□□□ -2
HMGB1P36-201ENST00000487709 PRPSAP1Q14558 356 aa2.53□□□□□ -2
HMGB1P36-201ENST00000487709 RFX4Q33E94 735 aa2.53□□□□□ -2
HMGB1P36-201ENST00000487709 CARD16Q5EG05 197 aa2.53□□□□□ -2
HMGB1P36-201ENST00000487709 PHYHD1Q5SRE7 291 aa2.53□□□□□ -2
HMGB1P36-201ENST00000487709 LRRC31Q6UY01 552 aa2.53□□□□□ -2
HMGB1P36-201ENST00000487709 ZNF620Q6ZNG0 422 aa2.53□□□□□ -2
HMGB1P36-201ENST00000487709 CCDC73Q6ZRK6 1079 aa2.53□□□□□ -2
HMGB1P36-201ENST00000487709 ZCCHC7Q8N3Z6 543 aaKnown RBP2.53□□□□□ -2
HMGB1P36-201ENST00000487709 CATSPER1Q8NEC5 780 aa2.53□□□□□ -2
HMGB1P36-201ENST00000487709 MCOLN3Q8TDD5 553 aa2.53□□□□□ -2
HMGB1P36-201ENST00000487709 SCFD1Q8WVM8 642 aa2.53□□□□□ -2
HMGB1P36-201ENST00000487709 RDH5Q92781 318 aa2.53□□□□□ -2
HMGB1P36-201ENST00000487709 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms