RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 ABLIM3O94929 683 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 MSL3P1P0C860 447 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 OR1D4P47884 311 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 FGL2Q14314 439 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 RBM39Q14498 530 aaKnown RBP13.62□□□□□ -0.23
EPHB4-206ENST00000487222 PLCXD3Q63HM9 321 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 NANOGP1Q8N7R0 232 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 FRMD1Q8N878 549 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 TCEAL7Q9BRU2 100 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 TMEM59Q9BXS4 323 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 METTL9Q9H1A3 318 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 ZNF286AQ9HBT8 521 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 RLIMQ9NVW2 624 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 TMEM129A0AVI4 362 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 LILRB5O75023 590 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 OPN1LWP04000 364 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 TK1P04183 234 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 TEAD1P28347 426 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 RPS19P39019 145 aaKnown RBP13.62□□□□□ -0.23
EPHB4-206ENST00000487222 RPL34P49207 117 aaKnown RBP13.62□□□□□ -0.23
EPHB4-206ENST00000487222 RPP30P78346 268 aaKnown RBP13.62□□□□□ -0.23
EPHB4-206ENST00000487222 ZP2Q05996 745 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 ZMAT1Q5H9K5 638 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 FAM57BQ71RH2 274 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 C1QTNF3Q9BXJ4 246 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 ENKD1Q9H0I2 346 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 SLC38A1Q9H2H9 487 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 SLCO5A1Q9H2Y9 848 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 NDRG4Q9ULP0 352 aaKnown RBP13.62□□□□□ -0.23
EPHB4-206ENST00000487222 CCL26Q9Y258 94 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 OR6C6A6NF89 314 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 H7C1C5 153 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 ZNF195O14628 629 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 FADS1O60427 444 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 ATP1B1P05026 303 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 CD63P08962 238 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 SLC35E2P0CK97 266 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 TRAPPC2P0DI81 140 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 TRAPPC2BP0DI82 140 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 GCH1P30793 250 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 PXNP49023 591 aaPredicted RBP13.62□□□□□ -0.23
EPHB4-206ENST00000487222 AFF3P51826 1226 aaKnown RBP13.62□□□□□ -0.23
EPHB4-206ENST00000487222 LCN6P62502 163 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 BTN1A1Q13410 526 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 CREB3L2Q70SY1 520 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 PRICKLE2Q7Z3G6 844 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 MISPQ8IVT2 679 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 LILRA3Q8N6C8 439 aaPredicted RBP13.62□□□□□ -0.23
EPHB4-206ENST00000487222 C22orf15Q8WYQ4 148 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 NMNAT2Q9BZQ4 307 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 GALNT9Q9HCQ5 603 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 CD14P08571 375 aa13.61□□□□□ -0.23
EPHB4-206ENST00000487222 SNRNP70P08621 437 aaKnown RBP13.61□□□□□ -0.23
EPHB4-206ENST00000487222 BMP1P13497 986 aa13.61□□□□□ -0.23
EPHB4-206ENST00000487222 ZNF44P15621 663 aa13.61□□□□□ -0.23
EPHB4-206ENST00000487222 VEGFCP49767 419 aa13.61□□□□□ -0.23
EPHB4-206ENST00000487222 TGFBR3Q03167 851 aa13.61□□□□□ -0.23
EPHB4-206ENST00000487222 GPR155Q7Z3F1 870 aa13.61□□□□□ -0.23
EPHB4-206ENST00000487222 KCNG3Q8TAE7 436 aa13.61□□□□□ -0.23
EPHB4-206ENST00000487222 ARHGAP9Q9BRR9 750 aa13.61□□□□□ -0.23
EPHB4-206ENST00000487222 PAPOLGQ9BWT3 736 aaKnown RBP13.61□□□□□ -0.23
EPHB4-206ENST00000487222 CA5BQ9Y2D0 317 aa13.61□□□□□ -0.23
EPHB4-206ENST00000487222 TRAV36DV7A0A075B6V5 113 aa13.61□□□□□ -0.23
EPHB4-206ENST00000487222 K7EPK0 472 aa13.61□□□□□ -0.23
EPHB4-206ENST00000487222 SULT1B1O43704 296 aa13.61□□□□□ -0.23
EPHB4-206ENST00000487222 MED6O75586 246 aa13.61□□□□□ -0.23
EPHB4-206ENST00000487222 POU3F2P20265 443 aaPredicted RBP13.61□□□□□ -0.23
EPHB4-206ENST00000487222 TMEM201Q5SNT2 666 aa13.61□□□□□ -0.23
EPHB4-206ENST00000487222 FAM71E2Q8N5Q1 922 aa13.61□□□□□ -0.23
EPHB4-206ENST00000487222 EID2Q8N6I1 236 aa13.61□□□□□ -0.23
EPHB4-206ENST00000487222 FAM174AQ8TBP5 190 aa13.61□□□□□ -0.23
EPHB4-206ENST00000487222 RAB3CQ96E17 227 aa13.61□□□□□ -0.23
EPHB4-206ENST00000487222 PRKRAO75569 313 aaKnown RBP13.61□□□□□ -0.23
EPHB4-206ENST00000487222 MAT1AQ00266 395 aaKnown RBP13.61□□□□□ -0.23
EPHB4-206ENST00000487222 SMAD2Q15796 467 aaKnown RBP13.61□□□□□ -0.23
EPHB4-206ENST00000487222 TMEM52BQ4KMG9 183 aa13.61□□□□□ -0.23
EPHB4-206ENST00000487222 SLC22A25Q6T423 547 aa13.61□□□□□ -0.23
EPHB4-206ENST00000487222 PLCXD1Q9NUJ7 323 aa13.61□□□□□ -0.23
EPHB4-206ENST00000487222 A8MXE2 369 aa13.61□□□□□ -0.23
EPHB4-206ENST00000487222 PLPP1O14494 284 aa13.61□□□□□ -0.23
EPHB4-206ENST00000487222 FBXO24O75426 580 aa13.61□□□□□ -0.23
EPHB4-206ENST00000487222 PAPLNO95428 1278 aa13.61□□□□□ -0.23
EPHB4-206ENST00000487222 DDOSTP39656 456 aa13.61□□□□□ -0.23
EPHB4-206ENST00000487222 CXCL12P48061 93 aa13.61□□□□□ -0.23
EPHB4-206ENST00000487222 CCR9P51686 369 aa13.61□□□□□ -0.23
EPHB4-206ENST00000487222 ALKBH1Q13686 389 aaKnown RBP13.61□□□□□ -0.23
EPHB4-206ENST00000487222 ARSJQ5FYB0 599 aaPredicted RBP13.61□□□□□ -0.23
EPHB4-206ENST00000487222 OR4D6Q8NGJ1 314 aa13.61□□□□□ -0.23
EPHB4-206ENST00000487222 FRZBQ92765 325 aa13.61□□□□□ -0.23
EPHB4-206ENST00000487222 NUDT22Q9BRQ3 303 aa13.61□□□□□ -0.23
EPHB4-206ENST00000487222 DUSP23Q9BVJ7 150 aa13.61□□□□□ -0.23
EPHB4-206ENST00000487222 CNTNAP3Q9BZ76 1288 aa13.61□□□□□ -0.23
EPHB4-206ENST00000487222 TEX51A0A1B0GUA7 166 aa13.6□□□□□ -0.23
EPHB4-206ENST00000487222 TRABD2BA6NFA1 517 aa13.6□□□□□ -0.23
EPHB4-206ENST00000487222 I6L893 689 aaPredicted RBP13.6□□□□□ -0.23
EPHB4-206ENST00000487222 HCRTR1O43613 425 aa13.6□□□□□ -0.23
EPHB4-206ENST00000487222 CD79BP40259 229 aa13.6□□□□□ -0.23
EPHB4-206ENST00000487222 SLC35D3Q5M8T2 416 aa13.6□□□□□ -0.23
EPHB4-206ENST00000487222 STEAP1BQ6NZ63 245 aa13.6□□□□□ -0.23
EPHB4-206ENST00000487222 TMEM64Q6YI46 380 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms