RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 USF3Q68DE3 2245 aa15.65■□□□□ 0.1
MCF2L-226ENST00000486210 DHRS12A0PJE2 317 aa15.64■□□□□ 0.09
MCF2L-226ENST00000486210 ZC3H12DA2A288 527 aaKnown RBP15.64■□□□□ 0.09
MCF2L-226ENST00000486210 TRAPPC13A5PLN9 417 aa15.64■□□□□ 0.09
MCF2L-226ENST00000486210 CGAP01215 116 aa15.64■□□□□ 0.09
MCF2L-226ENST00000486210 ROS1P08922 2347 aa15.64■□□□□ 0.09
MCF2L-226ENST00000486210 CD8BP10966 210 aa15.64■□□□□ 0.09
MCF2L-226ENST00000486210 PTNP21246 168 aa15.64■□□□□ 0.09
MCF2L-226ENST00000486210 SFTPDP35247 375 aa15.64■□□□□ 0.09
MCF2L-226ENST00000486210 NR1H2P55055 460 aa15.64■□□□□ 0.09
MCF2L-226ENST00000486210 SELENBP1Q13228 472 aa15.64■□□□□ 0.09
MCF2L-226ENST00000486210 KPNB1Q14974 876 aaKnown RBP15.64■□□□□ 0.09
MCF2L-226ENST00000486210 ULK3Q6PHR2 472 aa15.64■□□□□ 0.09
MCF2L-226ENST00000486210 GGNQ86UU5 652 aa15.64■□□□□ 0.09
MCF2L-226ENST00000486210 ZDHHC21Q8IVQ6 265 aa15.64■□□□□ 0.09
MCF2L-226ENST00000486210 RNF217Q8TC41 542 aa15.64■□□□□ 0.09
MCF2L-226ENST00000486210 DNAJA4Q8WW22 397 aaPredicted RBP15.64■□□□□ 0.09
MCF2L-226ENST00000486210 SLC38A4Q969I6 547 aa15.64■□□□□ 0.09
MCF2L-226ENST00000486210 SLCO4A1Q96BD0 722 aa15.64■□□□□ 0.09
MCF2L-226ENST00000486210 DNAJA3Q96EY1 480 aa15.64■□□□□ 0.09
MCF2L-226ENST00000486210 PRRC1Q96M27 445 aa15.64■□□□□ 0.09
MCF2L-226ENST00000486210 RAB3IPQ96QF0 476 aaPredicted RBP15.64■□□□□ 0.09
MCF2L-226ENST00000486210 ZNF300Q96RE9 604 aaPredicted RBP15.64■□□□□ 0.09
MCF2L-226ENST00000486210 PRSS27Q9BQR3 290 aa15.64■□□□□ 0.09
MCF2L-226ENST00000486210 OR11A1Q9GZK7 315 aa15.64■□□□□ 0.09
MCF2L-226ENST00000486210 MAGIXQ9H6Y5 334 aa15.64■□□□□ 0.09
MCF2L-226ENST00000486210 RNF122Q9H9V4 155 aa15.64■□□□□ 0.09
MCF2L-226ENST00000486210 IL1RAPQ9NPH3 570 aa15.64■□□□□ 0.09
MCF2L-226ENST00000486210 PAQR5Q9NXK6 330 aaPredicted RBP15.64■□□□□ 0.09
MCF2L-226ENST00000486210 CHRNA9Q9UGM1 479 aa15.64■□□□□ 0.09
MCF2L-226ENST00000486210 RIMS3Q9UJD0 308 aa15.64■□□□□ 0.09
MCF2L-226ENST00000486210 SLC7A7Q9UM01 511 aa15.64■□□□□ 0.09
MCF2L-226ENST00000486210 AURKCQ9UQB9 309 aa15.64■□□□□ 0.09
MCF2L-226ENST00000486210 IGKV1D-42A0A075B6H8 117 aa15.63■□□□□ 0.09
MCF2L-226ENST00000486210 A0A0J9YW62 118 aa15.63■□□□□ 0.09
MCF2L-226ENST00000486210 EIF1AYO14602 144 aaKnown RBP15.63■□□□□ 0.09
MCF2L-226ENST00000486210 OR5F1O95221 314 aa15.63■□□□□ 0.09
MCF2L-226ENST00000486210 SYNGR4O95473 234 aa15.63■□□□□ 0.09
MCF2L-226ENST00000486210 FABP3P05413 133 aa15.63■□□□□ 0.09
MCF2L-226ENST00000486210 CXCR1P25024 350 aa15.63■□□□□ 0.09
MCF2L-226ENST00000486210 MAGEA2P43356 314 aa15.63■□□□□ 0.09
MCF2L-226ENST00000486210 EIF1AXP47813 144 aaKnown RBP15.63■□□□□ 0.09
MCF2L-226ENST00000486210 CTBP2P56545 445 aa15.63■□□□□ 0.09
MCF2L-226ENST00000486210 CHRNB3Q05901 458 aa15.63■□□□□ 0.09
MCF2L-226ENST00000486210 TNK1Q13470 666 aa15.63■□□□□ 0.09
MCF2L-226ENST00000486210 CTU2Q2VPK5 515 aaKnown RBP15.63■□□□□ 0.09
MCF2L-226ENST00000486210 TMEM176BQ3YBM2 270 aaPredicted RBP15.63■□□□□ 0.09
MCF2L-226ENST00000486210 FAM98BQ52LJ0 330 aaKnown RBP15.63■□□□□ 0.09
MCF2L-226ENST00000486210 C3orf33Q6P1S2 294 aa15.63■□□□□ 0.09
MCF2L-226ENST00000486210 LINC00114Q6XXX2 140 aa15.63■□□□□ 0.09
MCF2L-226ENST00000486210 NKAIN4Q8IVV8 208 aa15.63■□□□□ 0.09
MCF2L-226ENST00000486210 ADGRG7Q96K78 797 aa15.63■□□□□ 0.09
MCF2L-226ENST00000486210 ARL5BQ96KC2 179 aa15.63■□□□□ 0.09
MCF2L-226ENST00000486210 POLR2J2Q9GZM3 115 aaKnown RBP15.63■□□□□ 0.09
MCF2L-226ENST00000486210 POLR2J3Q9H1A7 115 aaKnown RBP15.63■□□□□ 0.09
MCF2L-226ENST00000486210 C12orf10Q9HB07 376 aa15.63■□□□□ 0.09
MCF2L-226ENST00000486210 SERINC1Q9NRX5 453 aa15.63■□□□□ 0.09
MCF2L-226ENST00000486210 MAN2C1Q9NTJ4 1040 aa15.63■□□□□ 0.09
MCF2L-226ENST00000486210 ZNF701Q9NV72 531 aaPredicted RBP15.63■□□□□ 0.09
MCF2L-226ENST00000486210 MCTS1Q9ULC4 181 aaKnown RBP15.63■□□□□ 0.09
MCF2L-226ENST00000486210 MXRA5Q9NR99 2828 aa15.63■□□□□ 0.09
MCF2L-226ENST00000486210 A0A087WUJ7 227 aa15.62■□□□□ 0.09
MCF2L-226ENST00000486210 A0A1W2PNR3 127 aa15.62■□□□□ 0.09
MCF2L-226ENST00000486210 ELOA3DA6NLF2 546 aaPredicted RBP15.62■□□□□ 0.09
MCF2L-226ENST00000486210 RNF212BA8MTL3 300 aa15.62■□□□□ 0.09
MCF2L-226ENST00000486210 TNFSF11O14788 317 aa15.62■□□□□ 0.09
MCF2L-226ENST00000486210 CHP2O43745 196 aa15.62■□□□□ 0.09
MCF2L-226ENST00000486210 UMPSP11172 480 aa15.62■□□□□ 0.09
MCF2L-226ENST00000486210 RHCEP18577 417 aa15.62■□□□□ 0.09
MCF2L-226ENST00000486210 EGR4Q05215 589 aa15.62■□□□□ 0.09
MCF2L-226ENST00000486210 ELOA3BQ3SY89 546 aa15.62■□□□□ 0.09
MCF2L-226ENST00000486210 PDSS1Q5T2R2 415 aa15.62■□□□□ 0.09
MCF2L-226ENST00000486210 ANKRD34AQ69YU3 496 aa15.62■□□□□ 0.09
MCF2L-226ENST00000486210 FAM214BQ7L5A3 538 aa15.62■□□□□ 0.09
MCF2L-226ENST00000486210 MAPK1IP1LQ8NDC0 245 aa15.62■□□□□ 0.09
MCF2L-226ENST00000486210 ELOA3Q8NG57 546 aa15.62■□□□□ 0.09
MCF2L-226ENST00000486210 RSRC1Q96IZ7 334 aaKnown RBP15.62■□□□□ 0.09
MCF2L-226ENST00000486210 KLHL15Q96M94 604 aa15.62■□□□□ 0.09
MCF2L-226ENST00000486210 CHID1Q9BWS9 393 aa15.62■□□□□ 0.09
MCF2L-226ENST00000486210 KLHL4Q9C0H6 718 aa15.62■□□□□ 0.09
MCF2L-226ENST00000486210 DENND2DQ9H6A0 471 aaPredicted RBP15.62■□□□□ 0.09
MCF2L-226ENST00000486210 COQ10BQ9H8M1 238 aa15.62■□□□□ 0.09
MCF2L-226ENST00000486210 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.61■□□□□ 0.09
MCF2L-226ENST00000486210 ZNF208O43345 1280 aa15.61■□□□□ 0.09
MCF2L-226ENST00000486210 KLF4O43474 513 aa15.61■□□□□ 0.09
MCF2L-226ENST00000486210 PLAUP00749 431 aa15.61■□□□□ 0.09
MCF2L-226ENST00000486210 GPIP06744 558 aa15.61■□□□□ 0.09
MCF2L-226ENST00000486210 THBDP07204 575 aa15.61■□□□□ 0.09
MCF2L-226ENST00000486210 RAP2AP10114 183 aa15.61■□□□□ 0.09
MCF2L-226ENST00000486210 TFPIP10646 304 aa15.61■□□□□ 0.09
MCF2L-226ENST00000486210 PNMTP11086 282 aa15.61■□□□□ 0.09
MCF2L-226ENST00000486210 PPP3CBP16298 524 aa15.61■□□□□ 0.09
MCF2L-226ENST00000486210 ACTR3P61158 418 aa15.61■□□□□ 0.09
MCF2L-226ENST00000486210 LSM11P83369 360 aaKnown RBP eCLIP15.61■□□□□ 0.09
MCF2L-226ENST00000486210 EXOC3L2Q2M3D2 409 aa15.61■□□□□ 0.09
MCF2L-226ENST00000486210 SYT14P1Q58G82 188 aa15.61■□□□□ 0.09
MCF2L-226ENST00000486210 HMBOX1Q6NT76 420 aa15.61■□□□□ 0.09
MCF2L-226ENST00000486210 PIWIL3Q7Z3Z3 882 aaKnown RBP15.61■□□□□ 0.09
MCF2L-226ENST00000486210 OFCC1Q8IZS5 231 aa15.61■□□□□ 0.09
MCF2L-226ENST00000486210 ZNF610Q8N9Z0 462 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms