RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 OR5J2Q8NH18 312 aa10.16□□□□□ -0.78
NUP50-216ENST00000486184 SSC4DQ8WTU2 575 aa10.16□□□□□ -0.78
NUP50-216ENST00000486184 LRRC46Q96FV0 321 aa10.16□□□□□ -0.78
NUP50-216ENST00000486184 MOGAT1Q96PD6 335 aa10.16□□□□□ -0.78
NUP50-216ENST00000486184 PSD2Q9BQI7 771 aa10.16□□□□□ -0.78
NUP50-216ENST00000486184 SF3B5Q9BWJ5 86 aaKnown RBP10.16□□□□□ -0.78
NUP50-216ENST00000486184 GP6Q9HCN6 339 aa10.16□□□□□ -0.78
NUP50-216ENST00000486184 C20orf141Q9NUB4 165 aa10.16□□□□□ -0.78
NUP50-216ENST00000486184 MRPL39Q9NYK5 338 aaKnown RBP10.16□□□□□ -0.78
NUP50-216ENST00000486184 ZNF629Q9UEG4 869 aaPredicted RBP10.16□□□□□ -0.78
NUP50-216ENST00000486184 PROCRQ9UNN8 238 aa10.16□□□□□ -0.78
NUP50-216ENST00000486184 LYVE1Q9Y5Y7 322 aa10.16□□□□□ -0.78
NUP50-216ENST00000486184 U3KQV3 271 aa10.16□□□□□ -0.78
NUP50-216ENST00000486184 A0A1W2PNV4 684 aa10.15□□□□□ -0.78
NUP50-216ENST00000486184 SH3PXD2BA1X283 911 aa10.15□□□□□ -0.78
NUP50-216ENST00000486184 EEF1E1-BLOC1S5C9J1V9 151 aa10.15□□□□□ -0.78
NUP50-216ENST00000486184 BLOC1S5-TXNDC5H3BN57 136 aa10.15□□□□□ -0.78
NUP50-216ENST00000486184 CLOCKO15516 846 aa10.15□□□□□ -0.78
NUP50-216ENST00000486184 EEF1E1O43324 174 aaKnown RBP10.15□□□□□ -0.78
NUP50-216ENST00000486184 RNF13O43567 381 aa10.15□□□□□ -0.78
NUP50-216ENST00000486184 AKAP8O43823 692 aaKnown RBP10.15□□□□□ -0.78
NUP50-216ENST00000486184 SS18L1O75177 396 aaPredicted RBP10.15□□□□□ -0.78
NUP50-216ENST00000486184 SMNDC1O75940 238 aaKnown RBP eCLIP10.15□□□□□ -0.78
NUP50-216ENST00000486184 IL18BPO95998 194 aa10.15□□□□□ -0.78
NUP50-216ENST00000486184 LDLRP01130 860 aa10.15□□□□□ -0.78
NUP50-216ENST00000486184 ZNF43P17038 809 aa10.15□□□□□ -0.78
NUP50-216ENST00000486184 KLK2P20151 261 aa10.15□□□□□ -0.78
NUP50-216ENST00000486184 AGAP20933 346 aa10.15□□□□□ -0.78
NUP50-216ENST00000486184 FASP25445 335 aa10.15□□□□□ -0.78
NUP50-216ENST00000486184 AGTR1P30556 359 aa10.15□□□□□ -0.78
NUP50-216ENST00000486184 GPR4P46093 362 aa10.15□□□□□ -0.78
NUP50-216ENST00000486184 SLC9A3P48764 834 aa10.15□□□□□ -0.78
NUP50-216ENST00000486184 H3F3AP84243 136 aa10.15□□□□□ -0.78
NUP50-216ENST00000486184 PUDPQ08623 228 aa10.15□□□□□ -0.78
NUP50-216ENST00000486184 FOXF2Q12947 444 aa10.15□□□□□ -0.78
NUP50-216ENST00000486184 PDK3Q15120 406 aa10.15□□□□□ -0.78
NUP50-216ENST00000486184 ZFP1Q6P2D0 407 aa10.15□□□□□ -0.78
NUP50-216ENST00000486184 ZNF771Q7L3S4 317 aaPredicted RBP10.15□□□□□ -0.78
NUP50-216ENST00000486184 GALNT5Q7Z7M9 940 aa10.15□□□□□ -0.78
NUP50-216ENST00000486184 STK32CQ86UX6 486 aa10.15□□□□□ -0.78
NUP50-216ENST00000486184 UEVLDQ8IX04 471 aa10.15□□□□□ -0.78
NUP50-216ENST00000486184 TUSC5Q8IXB3 177 aa10.15□□□□□ -0.78
NUP50-216ENST00000486184 NAXEQ8NCW5 288 aa10.15□□□□□ -0.78
NUP50-216ENST00000486184 PAPD5Q8NDF8 572 aaKnown RBP10.15□□□□□ -0.78
NUP50-216ENST00000486184 OR6K3Q8NGY3 331 aa10.15□□□□□ -0.78
NUP50-216ENST00000486184 DUS3LQ96G46 650 aaKnown RBP10.15□□□□□ -0.78
NUP50-216ENST00000486184 FAM46AQ96IP4 442 aaKnown RBP10.15□□□□□ -0.78
NUP50-216ENST00000486184 OXGR1Q96P68 337 aa10.15□□□□□ -0.78
NUP50-216ENST00000486184 PIGMQ9H3S5 423 aa10.15□□□□□ -0.78
NUP50-216ENST00000486184 DENND2DQ9H6A0 471 aaPredicted RBP10.15□□□□□ -0.78
NUP50-216ENST00000486184 C12orf49Q9H741 205 aa10.15□□□□□ -0.78
NUP50-216ENST00000486184 ARMC1Q9NVT9 282 aa10.15□□□□□ -0.78
NUP50-216ENST00000486184 DNAJB9Q9UBS3 223 aa10.15□□□□□ -0.78
NUP50-216ENST00000486184 NOSIPQ9Y314 301 aaKnown RBP10.15□□□□□ -0.78
NUP50-216ENST00000486184 UBR5O95071 2799 aaPredicted RBP10.15□□□□□ -0.78
NUP50-216ENST00000486184 FAM90A27PA6NNH2 459 aa10.14□□□□□ -0.79
NUP50-216ENST00000486184 ZNF724A8MTY0 619 aa10.14□□□□□ -0.79
NUP50-216ENST00000486184 ZNF814B7Z6K7 855 aa10.14□□□□□ -0.79
NUP50-216ENST00000486184 C11orf98E9PRG8 122 aa10.14□□□□□ -0.79
NUP50-216ENST00000486184 MRPL33O75394 65 aaKnown RBP10.14□□□□□ -0.79
NUP50-216ENST00000486184 SERPINI2O75830 405 aa10.14□□□□□ -0.79
NUP50-216ENST00000486184 CLDN14O95500 239 aa10.14□□□□□ -0.79
NUP50-216ENST00000486184 ASAH2BP0C7U1 165 aa10.14□□□□□ -0.79
NUP50-216ENST00000486184 FUT4P22083 530 aa10.14□□□□□ -0.79
NUP50-216ENST00000486184 DNAJA1P31689 397 aaKnown RBP10.14□□□□□ -0.79
NUP50-216ENST00000486184 SLC16A1P53985 500 aa10.14□□□□□ -0.79
NUP50-216ENST00000486184 POU3F1Q03052 451 aaPredicted RBP10.14□□□□□ -0.79
NUP50-216ENST00000486184 LTBQ06643 244 aa10.14□□□□□ -0.79
NUP50-216ENST00000486184 PPP1R8Q12972 351 aaKnown RBP10.14□□□□□ -0.79
NUP50-216ENST00000486184 SLC17A1Q14916 467 aa10.14□□□□□ -0.79
NUP50-216ENST00000486184 SEC23BQ15437 767 aa10.14□□□□□ -0.79
NUP50-216ENST00000486184 SLC25A35Q3KQZ1 300 aa10.14□□□□□ -0.79
NUP50-216ENST00000486184 ANKDD1AQ495B1 522 aa10.14□□□□□ -0.79
NUP50-216ENST00000486184 SLC46A3Q7Z3Q1 461 aa10.14□□□□□ -0.79
NUP50-216ENST00000486184 OAFQ86UD1 273 aa10.14□□□□□ -0.79
NUP50-216ENST00000486184 ZNF100Q8IYN0 542 aa10.14□□□□□ -0.79
NUP50-216ENST00000486184 LRRC17Q8N6Y2 441 aa10.14□□□□□ -0.79
NUP50-216ENST00000486184 OR9K2Q8NGE7 335 aa10.14□□□□□ -0.79
NUP50-216ENST00000486184 PYDC1Q8WXC3 89 aa10.14□□□□□ -0.79
NUP50-216ENST00000486184 SLCO4A1Q96BD0 722 aa10.14□□□□□ -0.79
NUP50-216ENST00000486184 ZNF775Q96BV0 537 aaPredicted RBP10.14□□□□□ -0.79
NUP50-216ENST00000486184 BDH2Q9BUT1 245 aa10.14□□□□□ -0.79
NUP50-216ENST00000486184 BCO1Q9HAY6 547 aa10.14□□□□□ -0.79
NUP50-216ENST00000486184 FANCFQ9NPI8 374 aa10.14□□□□□ -0.79
NUP50-216ENST00000486184 PARPBPQ9NWS1 579 aa10.14□□□□□ -0.79
NUP50-216ENST00000486184 SEC14L4Q9UDX3 406 aa10.14□□□□□ -0.79
NUP50-216ENST00000486184 NOX1Q9Y5S8 564 aa10.14□□□□□ -0.79
NUP50-216ENST00000486184 PCNX1Q96RV3 2341 aa10.14□□□□□ -0.79
NUP50-216ENST00000486184 IGKV3D-15A0A087WSY6 115 aa10.13□□□□□ -0.79
NUP50-216ENST00000486184 A0A1W2PRG6 482 aa10.13□□□□□ -0.79
NUP50-216ENST00000486184 UNC119BA6NIH7 251 aa10.13□□□□□ -0.79
NUP50-216ENST00000486184 ZNF716A6NP11 495 aa10.13□□□□□ -0.79
NUP50-216ENST00000486184 ANKRD65E5RJM6 399 aa10.13□□□□□ -0.79
NUP50-216ENST00000486184 PLPP3O14495 311 aa10.13□□□□□ -0.79
NUP50-216ENST00000486184 RAMP1O60894 148 aa10.13□□□□□ -0.79
NUP50-216ENST00000486184 FZD7O75084 574 aa10.13□□□□□ -0.79
NUP50-216ENST00000486184 TNFSF13O75888 250 aa10.13□□□□□ -0.79
NUP50-216ENST00000486184 MAKP20794 623 aa10.13□□□□□ -0.79
NUP50-216ENST00000486184 KIR2DL2P43627 348 aaPredicted RBP10.13□□□□□ -0.79
NUP50-216ENST00000486184 HMGA2P52926 109 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms