RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 CPN1P15169 458 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 MAKP20794 623 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 ENPP1P22413 925 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 PRKACGP22612 351 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 GRPRP30550 384 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 DNAJA1P31689 397 aaKnown RBP5.03□□□□□ -1.6
COPS3-208ENST00000486032 RBM34P42696 430 aaKnown RBP5.03□□□□□ -1.6
COPS3-208ENST00000486032 MAGEA2P43356 314 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 ARHGDIAP52565 204 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 DLX5P56178 289 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 PER3P56645 1201 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 CSNK2A1P68400 391 aaPredicted RBP5.03□□□□□ -1.6
COPS3-208ENST00000486032 SLC35A1P78382 337 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 ELF3P78545 371 aaPredicted RBP5.03□□□□□ -1.6
COPS3-208ENST00000486032 EGR4Q05215 589 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 PMPCAQ10713 525 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 PMS2P3Q13401 168 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 SEC23BQ15437 767 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 BCL2A1Q16548 175 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 MLANAQ16655 118 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 CTU2Q2VPK5 515 aaKnown RBP5.03□□□□□ -1.6
COPS3-208ENST00000486032 ACSF3Q4G176 576 aaPredicted RBP5.03□□□□□ -1.6
COPS3-208ENST00000486032 EMC4Q5J8M3 183 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 OTUD3Q5T2D3 398 aaPredicted RBP5.03□□□□□ -1.6
COPS3-208ENST00000486032 HIST2H2BCQ6DN03 193 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 TMEM225Q6GV28 225 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 HMBOX1Q6NT76 420 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 ZFP1Q6P2D0 407 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 B3GNT6Q6ZMB0 384 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 MBOAT2Q6ZWT7 520 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 FCRLAQ7L513 359 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 PIWIL3Q7Z3Z3 882 aaKnown RBP5.03□□□□□ -1.6
COPS3-208ENST00000486032 NANOGNBQ7Z5D8 188 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 TMEM179BQ7Z7N9 219 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 GPAT4Q86UL3 456 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 IGFN1Q86VF2 1251 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 DOLPP1Q86YN1 238 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 CHERPQ8IWX8 916 aaKnown RBP5.03□□□□□ -1.6
COPS3-208ENST00000486032 C10orf67Q8IYJ2 551 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 HS3ST5Q8IZT8 346 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 GCNT2Q8N0V5 402 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 LRRC17Q8N6Y2 441 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 TMEM99Q8N816 258 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 CNEP1R1Q8N9A8 125 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 C9orf106Q8NAJ2 232 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 PAPD5Q8NDF8 572 aaKnown RBP5.03□□□□□ -1.6
COPS3-208ENST00000486032 OR10G2Q8NGC3 310 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 OR4K5Q8NGD3 323 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 OR51A7Q8NH64 312 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 FNDC9Q8TBE3 224 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 PIGXQ8TBF5 258 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 SLC7A13Q8TCU3 470 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 GNPDA2Q8TDQ7 276 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 GIPC3Q8TF64 312 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 CPNE4Q96A23 557 aaPredicted RBP5.03□□□□□ -1.6
COPS3-208ENST00000486032 INTS12Q96CB8 462 aaKnown RBP5.03□□□□□ -1.6
COPS3-208ENST00000486032 BPIFA2Q96DR5 249 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 HS6ST2Q96MM7 605 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 MOGAT1Q96PD6 335 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 UCN2Q96RP3 112 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 TMEM43Q9BTV4 400 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 PTDSS2Q9BVG9 487 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 POTEKPQ9BYX7 375 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 KLHL4Q9C0H6 718 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 PRDM14Q9GZV8 571 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 TP63Q9H3D4 680 aaPredicted RBP5.03□□□□□ -1.6
COPS3-208ENST00000486032 CALHM2Q9HA72 323 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 C12orf10Q9HB07 376 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 KRCC1Q9NPI7 259 aaPredicted RBP5.03□□□□□ -1.6
COPS3-208ENST00000486032 MEPEQ9NQ76 525 aaPredicted RBP5.03□□□□□ -1.6
COPS3-208ENST00000486032 NANSQ9NR45 359 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 ARMC1Q9NVT9 282 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 KIF17Q9P2E2 1029 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 DNAJB9Q9UBS3 223 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 MCTS1Q9ULC4 181 aaKnown RBP5.03□□□□□ -1.6
COPS3-208ENST00000486032 HDGFL3Q9Y3E1 203 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 MAGED1Q9Y5V3 778 aaPredicted RBP5.03□□□□□ -1.6
COPS3-208ENST00000486032 LYVE1Q9Y5Y7 322 aa5.03□□□□□ -1.6
COPS3-208ENST00000486032 KIAA1549Q9HCM3 1950 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 SPTA1P02549 2419 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 FLNCQ14315 2725 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 TRAV27A0A087WT01 109 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 A0A1W2PRQ8 180 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 LIPT2A6NK58 231 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 EFCAB9A8MZ26 197 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 ZNF814B7Z6K7 855 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 H3BNX3 289 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 PDLIM1O00151 329 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 SMAD9O15198 467 aaKnown RBP5.02□□□□□ -1.61
COPS3-208ENST00000486032 RNF13O43567 381 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 RAMP1O60894 148 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 NPIPB7O75200 414 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 AQP8O94778 261 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 PMS2P2O95744 297 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 GASTP01350 101 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 ADORA3P0DMS8 318 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 FCGR1AP12314 374 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 FKBP2P26885 142 aaKnown RBP5.02□□□□□ -1.61
COPS3-208ENST00000486032 ACVR2AP27037 513 aa5.02□□□□□ -1.61
COPS3-208ENST00000486032 POU1F1P28069 291 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms