RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 VGLL4Q14135 290 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 SF3A2Q15428 464 aaKnown RBP1.83□□□□□ -2.12
GCFC2-209ENST00000486016 BCL7AQ4VC05 210 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 CARD16Q5EG05 197 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 DMRTC1Q5HYR2 192 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 C1orf146Q5VVC0 180 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 C11orf71Q6IPW1 123 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 PGAP1Q75T13 922 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 GDPD3Q7L5L3 318 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 ABHD12BQ7Z5M8 362 aaPredicted RBP1.83□□□□□ -2.12
GCFC2-209ENST00000486016 ZNF679Q8IYX0 411 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 RDH10Q8IZV5 341 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 LRRC75A-AS1Q8N1F1 130 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 C6orf223Q8N319 242 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 FTMTQ8N4E7 242 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 RNF182Q8N6D2 247 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 OR4K14Q8NGD5 310 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 ZNF596Q8TC21 504 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 BRSK1Q8TDC3 778 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 SCFD1Q8WVM8 642 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 DNAJA4Q8WW22 397 aaPredicted RBP1.83□□□□□ -2.12
GCFC2-209ENST00000486016 UBE2E3Q969T4 207 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 RPUSD4Q96CM3 377 aaKnown RBP1.83□□□□□ -2.12
GCFC2-209ENST00000486016 PAGE5Q96GU1 130 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 TIMD4Q96H15 378 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 SEC22AQ96IW7 307 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 RPRD1AQ96P16 312 aaPredicted RBP1.83□□□□□ -2.12
GCFC2-209ENST00000486016 RBM14Q96PK6 669 aaKnown RBP1.83□□□□□ -2.12
GCFC2-209ENST00000486016 MTMR9Q96QG7 549 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 RNF2Q99496 336 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 HIST1H4GQ99525 98 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 MRPL45Q9BRJ2 306 aaKnown RBP1.83□□□□□ -2.12
GCFC2-209ENST00000486016 GON7Q9BXV9 100 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 PARD6BQ9BYG5 372 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 SELENOIQ9C0D9 397 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 POLR2J2Q9GZM3 115 aaKnown RBP1.83□□□□□ -2.12
GCFC2-209ENST00000486016 POLR2J3Q9H1A7 115 aaKnown RBP1.83□□□□□ -2.12
GCFC2-209ENST00000486016 RBKSQ9H477 322 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 REEP4Q9H6H4 257 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 POLE4Q9NR33 117 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 AIG1Q9NVV5 245 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 HOXC10Q9NYD6 342 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 EXTL2Q9UBQ6 330 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 ADAM28Q9UKQ2 775 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 TBX21Q9UL17 535 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 V9GY05 133 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 SH3TC1Q8TE82 1336 aa1.83□□□□□ -2.12
GCFC2-209ENST00000486016 ATP10AO60312 1499 aa1.82□□□□□ -2.12
GCFC2-209ENST00000486016 TCRBV9S1A1TA0A576 114 aa1.82□□□□□ -2.12
GCFC2-209ENST00000486016 A8MUA0 341 aa1.82□□□□□ -2.12
GCFC2-209ENST00000486016 GFYI3L273 518 aa1.82□□□□□ -2.12
GCFC2-209ENST00000486016 CXCL11O14625 94 aa1.82□□□□□ -2.12
GCFC2-209ENST00000486016 MBTPS2O43462 519 aa1.82□□□□□ -2.12
GCFC2-209ENST00000486016 UGT1A9O60656 530 aa1.82□□□□□ -2.12
GCFC2-209ENST00000486016 COX7A1P24310 79 aa1.82□□□□□ -2.12
GCFC2-209ENST00000486016 CXCR2P25025 360 aa1.82□□□□□ -2.12
GCFC2-209ENST00000486016 CCR1P32246 355 aa1.82□□□□□ -2.12
GCFC2-209ENST00000486016 MAGEA8P43361 318 aa1.82□□□□□ -2.12
GCFC2-209ENST00000486016 MNAT1P51948 309 aa1.82□□□□□ -2.12
GCFC2-209ENST00000486016 CRYBB1P53674 252 aaPredicted RBP1.82□□□□□ -2.12
GCFC2-209ENST00000486016 ATP1B3P54709 279 aa1.82□□□□□ -2.12
GCFC2-209ENST00000486016 SELENOTP62341 195 aa1.82□□□□□ -2.12
GCFC2-209ENST00000486016 NCBP1Q09161 790 aaKnown RBP1.82□□□□□ -2.12
GCFC2-209ENST00000486016 ASPHQ12797 758 aa1.82□□□□□ -2.12
GCFC2-209ENST00000486016 DUSP7Q16829 419 aa1.82□□□□□ -2.12
GCFC2-209ENST00000486016 KLHL38Q2WGJ6 581 aa1.82□□□□□ -2.12
GCFC2-209ENST00000486016 MAJINQ3KP22 176 aa1.82□□□□□ -2.12
GCFC2-209ENST00000486016 PARP15Q460N3 678 aa1.82□□□□□ -2.12
GCFC2-209ENST00000486016 C1orf100Q5SVJ3 147 aa1.82□□□□□ -2.12
GCFC2-209ENST00000486016 OR52E8Q6IFG1 317 aa1.82□□□□□ -2.12
GCFC2-209ENST00000486016 KDELC1Q6UW63 502 aa1.82□□□□□ -2.12
GCFC2-209ENST00000486016 PRSS41Q7RTY9 318 aa1.82□□□□□ -2.12
GCFC2-209ENST00000486016 EFL1Q7Z2Z2 1120 aaKnown RBP1.82□□□□□ -2.12
GCFC2-209ENST00000486016 DHDDSQ86SQ9 333 aa1.82□□□□□ -2.12
GCFC2-209ENST00000486016 EIF1ADQ8N9N8 165 aaKnown RBP1.82□□□□□ -2.12
GCFC2-209ENST00000486016 NKAPP1Q8N9T2 125 aa1.82□□□□□ -2.12
GCFC2-209ENST00000486016 OR52H1Q8NGJ2 320 aa1.82□□□□□ -2.12
GCFC2-209ENST00000486016 OR51S1Q8NGJ8 323 aa1.82□□□□□ -2.12
GCFC2-209ENST00000486016 FAM110BQ8TC76 370 aa1.82□□□□□ -2.12
GCFC2-209ENST00000486016 ZNF606Q8WXB4 792 aa1.82□□□□□ -2.12
GCFC2-209ENST00000486016 UFD1Q92890 307 aa1.82□□□□□ -2.12
GCFC2-209ENST00000486016 C10orf35Q96D05 121 aa1.82□□□□□ -2.12
GCFC2-209ENST00000486016 CMTM7Q96FZ5 175 aa1.82□□□□□ -2.12
GCFC2-209ENST00000486016 OXGR1Q96P68 337 aa1.82□□□□□ -2.12
GCFC2-209ENST00000486016 CLCC1Q96S66 551 aa1.82□□□□□ -2.12
GCFC2-209ENST00000486016 COPS8Q99627 209 aa1.82□□□□□ -2.12
GCFC2-209ENST00000486016 TSG101Q99816 390 aa1.82□□□□□ -2.12
GCFC2-209ENST00000486016 PLA2G2FQ9BZM2 168 aa1.82□□□□□ -2.12
GCFC2-209ENST00000486016 C20orf85Q9H1P6 137 aa1.82□□□□□ -2.12
GCFC2-209ENST00000486016 LRRC40Q9H9A6 602 aa1.82□□□□□ -2.12
GCFC2-209ENST00000486016 NHEJ1Q9H9Q4 299 aaPredicted RBP1.82□□□□□ -2.12
GCFC2-209ENST00000486016 WFDC1Q9HC57 220 aa1.82□□□□□ -2.12
GCFC2-209ENST00000486016 MCCC2Q9HCC0 563 aa1.82□□□□□ -2.12
GCFC2-209ENST00000486016 THUMPD1Q9NXG2 353 aaKnown RBP1.82□□□□□ -2.12
GCFC2-209ENST00000486016 RBAKQ9NYW8 714 aaPredicted RBP1.82□□□□□ -2.12
GCFC2-209ENST00000486016 ASF1AQ9Y294 204 aa1.82□□□□□ -2.12
GCFC2-209ENST00000486016 RPL36Q9Y3U8 105 aaKnown RBP1.82□□□□□ -2.12
GCFC2-209ENST00000486016 PLEKHH1Q9ULM0 1364 aa1.82□□□□□ -2.12
GCFC2-209ENST00000486016 FCGBPQ9Y6R7 5405 aaPredicted RBP1.82□□□□□ -2.12
GCFC2-209ENST00000486016 FRMPD3Q5JV73 1810 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms