RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 ADPRHL1Q8NDY3 354 aa10.5□□□□□ -0.73
HPS4-214ENST00000485842 PIK3C3Q8NEB9 887 aa10.5□□□□□ -0.73
HPS4-214ENST00000485842 OR5J2Q8NH18 312 aa10.5□□□□□ -0.73
HPS4-214ENST00000485842 MARVELD3Q96A59 401 aa10.5□□□□□ -0.73
HPS4-214ENST00000485842 APH1AQ96BI3 265 aa10.5□□□□□ -0.73
HPS4-214ENST00000485842 SGTBQ96EQ0 304 aa10.5□□□□□ -0.73
HPS4-214ENST00000485842 ZNF385AQ96PM9 386 aaKnown RBP10.5□□□□□ -0.73
HPS4-214ENST00000485842 PIP5K1AQ99755 562 aa10.5□□□□□ -0.73
HPS4-214ENST00000485842 SF3B5Q9BWJ5 86 aaKnown RBP10.5□□□□□ -0.73
HPS4-214ENST00000485842 CADM1Q9BY67 442 aaKnown RBP10.5□□□□□ -0.73
HPS4-214ENST00000485842 TRIM15Q9C019 465 aa10.5□□□□□ -0.73
HPS4-214ENST00000485842 FKRPQ9H9S5 495 aa10.5□□□□□ -0.73
HPS4-214ENST00000485842 NMNAT1Q9HAN9 279 aaPredicted RBP10.5□□□□□ -0.73
HPS4-214ENST00000485842 NANSQ9NR45 359 aa10.5□□□□□ -0.73
HPS4-214ENST00000485842 C20orf141Q9NUB4 165 aa10.5□□□□□ -0.73
HPS4-214ENST00000485842 B3GALT5Q9Y2C3 310 aa10.5□□□□□ -0.73
HPS4-214ENST00000485842 TESMINQ9Y4I5 508 aa10.5□□□□□ -0.73
HPS4-214ENST00000485842 C11orf98E9PRG8 122 aa10.49□□□□□ -0.73
HPS4-214ENST00000485842 GSC2O15499 205 aa10.49□□□□□ -0.73
HPS4-214ENST00000485842 OR7A10O76100 309 aa10.49□□□□□ -0.73
HPS4-214ENST00000485842 HPRP00739 348 aa10.49□□□□□ -0.73
HPS4-214ENST00000485842 HIST1H2ABP04908 130 aa10.49□□□□□ -0.73
HPS4-214ENST00000485842 ADORA3P0DMS8 318 aa10.49□□□□□ -0.73
HPS4-214ENST00000485842 ZNF43P17038 809 aa10.49□□□□□ -0.73
HPS4-214ENST00000485842 AHCYP23526 432 aa10.49□□□□□ -0.73
HPS4-214ENST00000485842 CCKARP32238 428 aa10.49□□□□□ -0.73
HPS4-214ENST00000485842 NTF4P34130 210 aa10.49□□□□□ -0.73
HPS4-214ENST00000485842 CLDN17P56750 224 aa10.49□□□□□ -0.73
HPS4-214ENST00000485842 LSM11P83369 360 aaKnown RBP eCLIP10.49□□□□□ -0.73
HPS4-214ENST00000485842 SORDQ00796 357 aa10.49□□□□□ -0.73
HPS4-214ENST00000485842 POU3F1Q03052 451 aaPredicted RBP10.49□□□□□ -0.73
HPS4-214ENST00000485842 PUDPQ08623 228 aa10.49□□□□□ -0.73
HPS4-214ENST00000485842 TRAP1Q12931 704 aaKnown RBP10.49□□□□□ -0.73
HPS4-214ENST00000485842 FLOT2Q14254 428 aa10.49□□□□□ -0.73
HPS4-214ENST00000485842 POU4F3Q15319 338 aa10.49□□□□□ -0.73
HPS4-214ENST00000485842 PGM2L1Q6PCE3 622 aa10.49□□□□□ -0.73
HPS4-214ENST00000485842 CREB3L2Q70SY1 520 aa10.49□□□□□ -0.73
HPS4-214ENST00000485842 HIST3H2AQ7L7L0 130 aa10.49□□□□□ -0.73
HPS4-214ENST00000485842 CXorf67Q86X51 503 aaPredicted RBP10.49□□□□□ -0.73
HPS4-214ENST00000485842 MEX3DQ86XN8 651 aaKnown RBP10.49□□□□□ -0.73
HPS4-214ENST00000485842 EPHX4Q8IUS5 362 aa10.49□□□□□ -0.73
HPS4-214ENST00000485842 UEVLDQ8IX04 471 aa10.49□□□□□ -0.73
HPS4-214ENST00000485842 NRMQ8IXM6 262 aa10.49□□□□□ -0.73
HPS4-214ENST00000485842 LRRC17Q8N6Y2 441 aa10.49□□□□□ -0.73
HPS4-214ENST00000485842 ZIC4Q8N9L1 334 aa10.49□□□□□ -0.73
HPS4-214ENST00000485842 SCAIQ8N9R8 606 aa10.49□□□□□ -0.73
HPS4-214ENST00000485842 OR52J3Q8NH60 311 aa10.49□□□□□ -0.73
HPS4-214ENST00000485842 LINC01560Q8TB33 94 aa10.49□□□□□ -0.73
HPS4-214ENST00000485842 ACOT11Q8WXI4 607 aaPredicted RBP10.49□□□□□ -0.73
HPS4-214ENST00000485842 HIST1H2ACQ93077 130 aa10.49□□□□□ -0.73
HPS4-214ENST00000485842 TMEM45BQ96B21 275 aa10.49□□□□□ -0.73
HPS4-214ENST00000485842 OXGR1Q96P68 337 aa10.49□□□□□ -0.73
HPS4-214ENST00000485842 SPOCK3Q9BQ16 436 aa10.49□□□□□ -0.73
HPS4-214ENST00000485842 FANCFQ9NPI8 374 aa10.49□□□□□ -0.73
HPS4-214ENST00000485842 PARPBPQ9NWS1 579 aa10.49□□□□□ -0.73
HPS4-214ENST00000485842 MRPL39Q9NYK5 338 aaKnown RBP10.49□□□□□ -0.73
HPS4-214ENST00000485842 ELOVL5Q9NYP7 299 aa10.49□□□□□ -0.73
HPS4-214ENST00000485842 B3GAT1Q9P2W7 334 aa10.49□□□□□ -0.73
HPS4-214ENST00000485842 ZNF229Q9UJW7 825 aa10.49□□□□□ -0.73
HPS4-214ENST00000485842 ASH1LQ9NR48 2969 aaKnown RBP10.49□□□□□ -0.73
HPS4-214ENST00000485842 PKDREJQ9NTG1 2253 aa10.49□□□□□ -0.73
HPS4-214ENST00000485842 A0A087WUU8 490 aa10.48□□□□□ -0.73
HPS4-214ENST00000485842 TRBV4-1A0A0J9YWV2 114 aa10.48□□□□□ -0.73
HPS4-214ENST00000485842 TUBAL3A6NHL2 446 aa10.48□□□□□ -0.73
HPS4-214ENST00000485842 MS4A18H0YCH9 400 aa10.48□□□□□ -0.73
HPS4-214ENST00000485842 C16orf97H3BN30 126 aa10.48□□□□□ -0.73
HPS4-214ENST00000485842 PLPP3O14495 311 aa10.48□□□□□ -0.73
HPS4-214ENST00000485842 ACOT8O14734 319 aa10.48□□□□□ -0.73
HPS4-214ENST00000485842 HNRNPRO43390 633 aaKnown RBP10.48□□□□□ -0.73
HPS4-214ENST00000485842 TRAF3IP2O43734 574 aaPredicted RBP10.48□□□□□ -0.73
HPS4-214ENST00000485842 OR6A2O95222 327 aa10.48□□□□□ -0.73
HPS4-214ENST00000485842 ADAP00813 363 aa10.48□□□□□ -0.73
HPS4-214ENST00000485842 SAGP10523 405 aaPredicted RBP10.48□□□□□ -0.73
HPS4-214ENST00000485842 HLA-DOBP13765 273 aa10.48□□□□□ -0.73
HPS4-214ENST00000485842 FUT1P19526 365 aa10.48□□□□□ -0.73
HPS4-214ENST00000485842 UGT2B10P36537 528 aa10.48□□□□□ -0.73
HPS4-214ENST00000485842 PEX19P40855 299 aa10.48□□□□□ -0.73
HPS4-214ENST00000485842 KIR2DL3P43628 341 aa10.48□□□□□ -0.73
HPS4-214ENST00000485842 SELENOPP49908 381 aa10.48□□□□□ -0.73
HPS4-214ENST00000485842 ERFP50548 548 aa10.48□□□□□ -0.73
HPS4-214ENST00000485842 CHRNB3Q05901 458 aa10.48□□□□□ -0.73
HPS4-214ENST00000485842 TSC22D1Q15714 1073 aa10.48□□□□□ -0.73
HPS4-214ENST00000485842 MS4A18Q3C1V0 323 aa10.48□□□□□ -0.73
HPS4-214ENST00000485842 IQCCQ4KMZ1 466 aa10.48□□□□□ -0.73
HPS4-214ENST00000485842 ANKRD34AQ69YU3 496 aa10.48□□□□□ -0.73
HPS4-214ENST00000485842 NIPAL3Q6P499 406 aa10.48□□□□□ -0.73
HPS4-214ENST00000485842 TBPL2Q6SJ96 375 aa10.48□□□□□ -0.73
HPS4-214ENST00000485842 STAC2Q6ZMT1 411 aa10.48□□□□□ -0.73
HPS4-214ENST00000485842 RRM2BQ7LG56 351 aa10.48□□□□□ -0.73
HPS4-214ENST00000485842 SPATA24Q86W54 205 aa10.48□□□□□ -0.73
HPS4-214ENST00000485842 ACBD4Q8NC06 268 aa10.48□□□□□ -0.73
HPS4-214ENST00000485842 BPIFA2Q96DR5 249 aa10.48□□□□□ -0.73
HPS4-214ENST00000485842 LRMDAQ9H2I8 198 aa10.48□□□□□ -0.73
HPS4-214ENST00000485842 ANKRD19PQ9H560 264 aa10.48□□□□□ -0.73
HPS4-214ENST00000485842 IL1RAPQ9NPH3 570 aa10.48□□□□□ -0.73
HPS4-214ENST00000485842 CRIM1Q9NZV1 1036 aa10.48□□□□□ -0.73
HPS4-214ENST00000485842 UPB1Q9UBR1 384 aa10.48□□□□□ -0.73
HPS4-214ENST00000485842 SLC7A8Q9UHI5 535 aa10.48□□□□□ -0.73
HPS4-214ENST00000485842 POMPQ9Y244 141 aa10.48□□□□□ -0.73
HPS4-214ENST00000485842 FLNBO75369 2602 aaKnown RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms